| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CND00900 |
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| Symbol | |
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| ID | 3256928 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006686 |
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| Strand | - |
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| Start bp | 278992 |
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| End bp | 283658 |
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| Gene Length | 4667 bp |
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| Protein Length | 1189 aa |
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| Translation table | |
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| GC content | 46% |
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| IMG OID | 638256026 |
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| Product | pre-mRNA splicing factor, putative |
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| Protein accession | XP_570324 |
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| Protein GI | 58266336 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1643] HrpA-like helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CTCCGTCGCC GCCACTCGCC AGCAACGGCA ACCGTCACGA CGAGCAATAC TACTATCAAA
ACGATATTCC TAAAAACCCG CAATTGCTTG CGCTCAAGCT GATCGGTCAG CCAACGACAC
TCCCAATTTC TACTTATCAC CTAGACTACC CACCGAAAGT CGCCGATTCC TATAATTCTT
TTCCGACTTC AGAAGCTGCT TTTATGATGT CCACTGATAA AGAGCTGTAT AAGCTCGAGC
TTCTCTCGCT TGTATCGAAG GTGTCCCAGG AGCTCTTCAA CCACACTAAG CTTCAAGACA
AAAAACTAGC TGAATTTGTG ATAGCAGTAG GTCTCTCCTT TCTCTTTCCT CTGTGGAGGT
TCTGACTCAT TACAGCTTCA CGAACAAAGT AAAACAACTG AAGCGTTCCA GAAGAAGCTC
AATGAGATCG GCGCAGACTT TCCCGAATGG TTTGTCAAGA ATCTCGACAG ACTGATCGTT
ACCATGCACC CCAAGTATAA GAGGAAAGCG GCCAAGATGA AAGCCTCGAA GCAGTCAGGA
AAGTCTGACG ATGGGCAATC TGTCATGGAG GAGCAGAAGC AACTTCAGGC GAGAAAGTTT
CCCGGGTTGT CCATGCCTGA CCAAGATTGG AAGCCTGCCG AGAAATATGT CGACGAAAGG
GCCGCAAAAG AACCGCACGA GACCCTTCCG GAATCACTTT CGACCAGTGA TACTATGGCC
CAGTTAGAGT CGATCGCGTC TCGCCGAAAT AGACCGGCGG CTGAGGATTT CTTGGACGGG
GAGCCTGCTG CGAAGAAATT GCGGAGTGCC ACTAGCAGTG GTCATGACGG GTCGTCAGGA
CGACGGGGCG GATATGAAGG AGGCAGCTTT AGAGATTCTT TTAGACATGG GCGTCCGACG
GTTGATGAGA GGCCCGTACT CTACAAGATC TACAATGGCA CTATCGCGAA TATCACCGAT
TTTGGGGCTT TTGTAACTTT AGATGGCGTA GAAAGAAAAA TCGATGGTAA TCAAAGGTCA
AATGAAGGTA AGTTATCCCA ATCGTGCCTT CCCATGCTTG ATTTGAACTG ACACTTTCAG
GCTTAATCCA TGTATCGAAT ATTACAAATG GAAGAGTTAA CTCACCCCGA GACTTCCTTA
AACGGGGTCA ACGAGTCAAA GTCAAAGTTA TGGCTGTCAG TCCTAAGATC GGTCTAAGTA
TGAAGGATGT CGATCAGAAC ACTGGTGATG ATCTTTCGTG AGTGCAAGTG TATGCTGCAC
CTGCTTTTTG TTGACTTAGT TATAAGCCCA CATCTTACTG TCAAGACTGC TGAAGAGGCC
GCAGTGCAGC AGCAAAGGAT GTCATCTTAT GCAGCTAGTG GAAGTAACAG CACCCCCCTC
TTAGCAGTTG ATGAGCGGCA GCGATCTAGT GCAAAGAGAT TATCAAGTCC CGAGCGGTTC
GAGATTAAAC AGCTCATAGC CAGTGGGGCC GTATCTGCAG CAGATGTGAG TATTCCTACT
GTACGCGAGA ATAATGGGCT GATGGGATTG CAGTACCCTG ATCTTGATGA AGACTTCAGC
ACTAACGTCG CCAATCATGA GATTGAAGAA GACATTGATG TCGAAGTTAA TGAAGTCGAA
CCGGCGTTCT TATCGGGCCA GACCAAAGTC ACCCTGGAAC TCTCTCCTGT TAAAATCATC
AAAGCACCAG ACGGGTAATG TTCATTCTGT TCGATATACA CGACAATTTT GTTGATCACC
GTTTTAGCTC ACTTAACCGT TCTGCTTTAG CAGGCGCTTC ATTGGCGAAA GAAAGACGTG
ATCTCAAACG TTTGGAAGCG AATGAGCAGG CCGACGCAGA GACCAGAGAG ATCAACCAGC
CTTGGCTTGA TCCCATGGCT AACCAAAACG AGCGGCAGTT TGCATCAGAC ATCAAAGGGA
ACCTGCTTGG CCAAAAGGCC GCTCAAATGC CTGCCTGGAA AGCTGCAAAT AAAGTTGTGT
CGTATGGCAA GATCACTTCT ATGAGTATAC AAGAACAAAG ACGCAGTCTG CCCATCTACA
AATTACGGGA GCAGTTGGTC GCCGCTATTC GAGATGTGAG TACCTTCTTG TTCACTTTCA
GTCAATCGAA TACTCATGTG CATTCGTAGA ATCAAATTCT TGTTGTAGTT GGAGACACTG
GGTCTGGGAA GACTACTCAA ATGGCGCAAT ACCTCGCTGA AGAGGGATTC CTCGAAAAAG
GGCGTTTGGG ATGCACTCAG CCGCGAAAGG TTGCTGCTGT TTCTGTCGCT AAGCGTGTTG
CAGAGGAAGT GGGTTGTCGA CTCGGGGCTG AAGTCGGCTA CACTATCCGT TTTGAAGATA
TGACCAGTCC TGAGACCAAG ATCAAGTACA TGGTCAGTCG TTTCAGCTTT TACTTTGACT
ATGACTAACT TCCTATGTAG ACCGATGGTA TGCTTCTTCG TGAATTGCTG GTTGATCCGG
ATTGCTCGAA ATACTCTGTG ATTATGCTTG ATGAAGCGCA CGAGCGCACA ATCGCAACTG
ACGTCCTCTT CGGTCTCCTG AAAAGTAGGT TAAGCTCCTG ATGTTACTCG CCATGATGCT
AATACTGTTA TTAACAGAGG CTTGCAAACG ACGCCCAGAT CTTAAGCTAA TATGTACTTC
TGCCACACTG GATGCTGCCA AGTTTGCGAC CTACTTCTGG GGTTGCCCAA TCTTTACCAT
TCCTGGCCGA ACATACCCCG TCGAGACACT TTATACAAAG GAGCCTGAGC CCGACTACCT
GGAGGCCTCT CTCATCACCA TCCTTCAAAT CCATCTCATG GAACCAGCAG GCGATGTTCT
TCTTTTCCTT ACAGGTCAAG AGGAGATCGA TACAGCATGT GAGGTTCTAT ATGAGCGAGT
CAAGGCATTG GGTCCTCAAG TTCCAGAGCT TCTCATTTTA CCGGTATATG CTGCACTTCC
CTCTGAGATG CAGTCACGCA TCTTTGAGCC AGCCCCACCT GGTGCACGTA AGGTGGTCAT
CGCAACCAAC ATTGCAGAGA CCAGTATCAC CATTGATGGC ATATACTATG TCATTGATCC
TGGTTTTGCA AAGCAGAATG CTTATGACCC AAAGCTTGGT ATGGATTCTT TGATAGTCAC
TGTGGGTCTT CATATCAGTT GTCATGAACA AACTAATGTT GTGTAGCCGA TCTCCCAAGC
GCAAGCACGT CAAAGAGCTG GGCGTGCCGG CCGCACGGGC CCTGGCAAGT GCTATCGTCT
CTACACAGAG GTCGCCTACC GTAATGAAAT GTTACCCAAC CCAATTCCTG AAATCCAACG
AACCAATCTT GCATCTACTA TTCTCACTCT GAAAGCAATG GGAATCAACG ATCTTATCAG
TTTCGATTTC ATGGATCCTC CTCCAGCAGC AACCATGTTA ACAGCTTTAG AACAACTTTA
TGCTCTTGGT GCCTTGGATG ATGAAGGGCT GTTGACCAGG ATTGGTCGAA AAATGGCAGA
TTTTCCTCTA GACCCTCCTT TATCCAAGAT GCTTATCAAA TCTGTTGATT ATGGATGTTC
TGAAGAAGCC TTGACAATTG TGGCTATGCT GCAAGCTGGG GGCCAAGTAT ACTATCGACC
CAAGGACAAA CAGACTCAAG CGGACGCCAA AAAGGCTAAG TTTCATCAGC CAGAAGGTGA
CCTTCTTACA TTACTTGTGA GTGATCCATA ATTTAATTAC ATCAGGCATG GAGAGTAGTA
CTGAATTAAA GTTGTTAGGC TGTCTATAAT GGATGGAAAA ACTCGAAATT CAGTAACCCA
TGGTGCTTCG AAAACTTTAT TCAAACACGA GCCATGAAAA CAGCGCAAGA TGTAAGAAAA
CGTGGGTGTA AAATTTTTGT CAATGTTATT GTTGGTTATG AAGCTGATTT TTTTAATCAG
AGTTGATTGG AATTATGGAT AGATATAAAC ACGATCTTGG TAGGTCCTTA TCGCCATCAA
AGCCTCTTAT GTGTTTACAA CTCTTTATAG TGTCATGTGG TACCAATTAC AACCGAGTAC
GGATGGCCAT TTGCTCTGGA TTCTTCAGAA ATGCTGCCAA GAAGGGTAAG CTTGTCTTTT
TCATGGTGAT GTTTGTTCTC ATGTGCTGAC GATCTGTTCC AGACCCCACT GAAGGTTATA
AGACACTTGT TGAGGGTACA CCTGTCAGCA TTCATCCCTC AAGTGCCTTG TTCCAGCGAC
CCCCTGAATG GTGTGTGTAT TATGAACTGG TTCTTACTGC CAGTAAGTCT AACTGTACTA
AGGTATTTCA ATAAATGCTC ATCAGTTTCA CAGAGGAATA CATGCACCAG GTCACTGTTA
TTGAACCAAA ATGGCTTTCT GAAGTGGCAC CAACATTCTT CCGTATTGCT GATCAAAACA
AGATTAGCAA GCGTAAGGCA TCTGAGAAGA TTGAGCCTCT GTTTGATCGT TTTGCTGCAG
ATAAAGATGA CTGGGTATGT ATGTTCTGGA CTGGTGATCC AACATGAGCT GATGTAAAAA
CCTGCAGCGT CTCAGCAAGC AGAAGAAAGC AGCTCGCTCT TCACAGACTT TTGGTTGATC
CATATTCCCT ATCATATTTC AAAAATACAA TTACATCATT TCTCTTTAGC TTTCTGGATC
CAAGGGTTCC AAATTAGTAA ACAAAAGATG CATTGCCAAA ATGCCAT
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| Protein sequence | MMSTDKELYK LELLSLVSKV SQELFNHTKL QDKKLAEFVI ALHEQSKTTE AFQKKLNEIG
ADFPEWFVKN LDRLIVTMHP KYKRKAAKMK ASKQSGKSDD GQSVMEEQKQ LQARKFPGLS
MPDQDWKPAE KYVDERAAKE PHETLPESLS TSDTMAQLES IASRRNRPAA EDFLDGEPAA
KKLRSATSSG HDGSSGRRGG YEGGSFRDSF RHGRPTVDER PVLYKIYNGT IANITDFGAF
VTLDGVERKI DGNQRSNEGL IHVSNITNGR VNSPRDFLKR GQRVKVKVMA VSPKIGLSMK
DVDQNTGDDL SPHLTVKTAE EAAVQQQRMS SYAASGSNST PLLAVDERQR SSAKRLSSPE
RFEIKQLIAS GAVSAADYPD LDEDFSTNVA NHEIEEDIDV EVNEVEPAFL SGQTKVTLEL
SPVKIIKAPD GSLNRSALAG ASLAKERRDL KRLEANEQAD AETREINQPW LDPMANQNER
QFASDIKGNL LGQKAAQMPA WKAANKVVSY GKITSMSIQE QRRSLPIYKL REQLVAAIRD
NQILVVVGDT GSGKTTQMAQ YLAEEGFLEK GRLGCTQPRK VAAVSVAKRV AEEVGCRLGA
EVGYTIRFED MTSPETKIKY MTDGMLLREL LVDPDCSKYS VIMLDEAHER TIATDVLFGL
LKKACKRRPD LKLICTSATL DAAKFATYFW GCPIFTIPGR TYPVETLYTK EPEPDYLEAS
LITILQIHLM EPAGDVLLFL TGQEEIDTAC EVLYERVKAL GPQVPELLIL PVYAALPSEM
QSRIFEPAPP GARKVVIATN IAETSITIDG IYYVIDPGFA KQNAYDPKLG MDSLIVTPIS
QAQARQRAGR AGRTGPGKCY RLYTEVAYRN EMLPNPIPEI QRTNLASTIL TLKAMGINDL
ISFDFMDPPP AATMLTALEQ LYALGALDDE GLLTRIGRKM ADFPLDPPLS KMLIKSVDYG
CSEEALTIVA MLQAGGQVYY RPKDKQTQAD AKKAKFHQPE GDLLTLLAVY NGWKNSKFSN
PWCFENFIQT RAMKTAQDVR KQLIGIMDRY KHDLVSCGTN YNRVRMAICS GFFRNAAKKD
PTEGYKTLVE GTPVSIHPSS ALFQRPPEWC VYYELVLTAK EYMHQVTVIE PKWLSEVAPT
FFRIADQNKI SKRKASEKIE PLFDRFAADK DDWRLSKQKK AARSSQTFG
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