| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CND00800 |
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| Symbol | |
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| ID | 3257344 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006686 |
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| Strand | - |
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| Start bp | 213378 |
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| End bp | 217000 |
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| Gene Length | 3623 bp |
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| Protein Length | 1002 aa |
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| Translation table | |
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| GC content | 48% |
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| IMG OID | 638256018 |
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| Product | conserved hypothetical protein |
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| Protein accession | XP_570662 |
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| Protein GI | 58267012 |
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| COG category | [K] Transcription |
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| COG ID | [COG0557] Exoribonuclease R |
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| TIGRFAM ID | [TIGR00358] VacB and RNase II family 3'-5' exoribonucleases |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.123934 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CTCCTGTAAC TGGTGATTAT TCATCTCGAC ATATCTCCAC TCCTCAACGA CAATGGCAGC
AGTGAAGTCG CATCCCCCCA TCACCATCCT CAAGCGCACA AGAGAGGACC AGCACCTTTC
TCAAAATAAA TTTCTCAAGA AAACCGCAAG GGGGAAAGTC ATAAACAGTG AGTCTCTTCT
CTTCTTACCA ACGCTGACAA AGGCCAGTCT TCCGAGAAAG ATATGTCCGT GATGATATCC
CCTGTGGATA CCAAGACTGC CATCAATGTG CACAGTTCCC AGGATACAAG CCTGTCCTCC
CCAGGACCGG ATATTTACAA CATACAAAGT TTGCAGGGAA TGGCCACTAC CTCGTCATTG
ACACCAATAT TGTGCTCCAC CAGGTATGTC CTCTTTTACC CTGCATAGTC GCTACTAAAC
TTTCTGTAGA TGGACTTGCT CCAGTCTCTC CCGGCACAAC TTCCCCTCAT CATCCCTTCC
ACCACTATCC GCGAAACTCG TCACCGTTCT CTTCCTTTAT ACAATCGTCT TCAACAGCTT
ATCCAGGATG AAGATCGTCT CATCTGGGTG TGGTGGAATG AAGAGCGTCG TGAGACCGCT
ACTGTTCGGG AAGTAGATGA AGAGCATGGC AGGGAAAAGA TCAACGATCG TAATGACCGA
GCAATCCGCC AGACTGTCCT TTTTTACGCC GAGCACTTGT CCCGACTCGC GTCCAATGCC
CCTTCCCTCA TCTTACTCAC CGATGATGCT GCCAACCGTG GGCTCGCCGC CGAGCAAGGG
ATTGTGGCTG TTAGTGCAAG GGAGTACGTC GATGGTCTAG AACCCGCTGA GCGAGAAAAA
CTTGTCGACC TCGTCGTCGG TGGTGTAGAC GAAATTGAGG TTGTCGAGCG CAGAAGTCGC
CGTATCTACC CCGACTATCT TCCTCAGGAT ACACTTCTCG CAGGTGTCAA AACGGGACGT
TACCACCAAG GTCACTTTAA CGCGAACCAG TACAATTACC TTGAAGGCAC TGTTAACGTT
CCTGGGCTTG TACGACCTGT CTTGTTGGTG GGCAGGCAAG CAATGAACAG AAGTGTCAAT
GGCGACGTCG TTGTGGTTGA AATCTTCCCC GAAACTGAAT GGAAAGCCCC CAGAGAAGAG
GTTGTTGATC AAGATATAGC TTTGAGGGAT GATGATGTGG AAGACGACGA GAGTGGTGGA
GTAGCCGATA AGGAATTCGT TAAGGAGAAA CAGGAAAGGC TAGAGACGGA CGATGCCAAG
AAGAACAAGA AGGAAATTCT GCCTACAGGT CGAGTCGTCG GTATTGTTAA ACGTAACTGG
AGAGCGTAAG TTCGGTCTTG TTTGTCTTTC ATTATCGATC CCATGCTAAA CCTTTAAACA
GATATGTATG TCACCTTGAC CGTTCATCTC TTTCCGACTC GGCCTTCACT TCCCTCGCAC
AACAAACAGT CTTCGCCACT CCCCTCTCTC GTGCTCTTCC CCGTATCCGT CTTAGGACTC
GCCAAGCTCC CCAATTGGTG GACCAAAAAA TTTTAGTTAC CATTGATAAC TGGTCCCCCA
CCTCCCGTTA TCCCGATGGC CACTTCGTTC GTGCGCTGGG TAAAGTTGCC TCCAAAGAAG
CGGAGCAGGA GTCCCTTCTC CTTGAGTACG AGGTTCCATA TCGACCTTTT GGAAAGGCTA
TCTTGAACTG TCTTCCGGCC GAAGGAGACA ATTGGGTCGT CCCCAAGAAG GATATGGAAT
GTTTGGAGTG GAGGGATAGA GAAGATTTGA GAGATTTGGA TATCTGCAGT ATTGATCCCC
CTGGATGTCA GGATATCGAT GATGCACTAC ATGCGAGGAG GTTGCCGAAC GGTAATATCG
AAGCTGGTGT CCGTAAGTCC ACTTTTCCTC GTTCACCTTG CGGAGAAGGT TCTAATTTCA
TCAACAATGC AGATATCGCC GACGTGTCAC ACTTTGTCCA TCCCGATAAT CCTATGGATT
CCGAAGCTGC CTCGCGTGGT ACCACTGTTT ACCTCGTCGA TAAGCGAATC GATATGCTTC
CTTCTTTGTT AGGTACTAAC CTTTGTTCAT TGAGGCCATT TGTCGAGAGA TTGGCATTTA
GTGTTATTTG GGTATGTTTC CTTTCAATTG TCCTCCTTTT GTCCTCTTTT TTCCTCAAAT
GGCATCGCAC TGACACAACC GTACACATCA GGAATTGAAC CAAGATGCAG AAGTTGTTGA
CGTAAGGTTC GTCAAGAGTG TGATCTCGTC CAAAGAGGCA TTCACGTACG AAGCCGCTCA
ATTACGCAAG GATGATAAGT GAGTTGTCTT GCGGACCGGG TTTGGGTAAT GACCCAAGCA
ACAACACTAA CGTCCGCATG CAGATCTATG AACGACCCGC TCACAAACTC CATTCGCCTT
TTGAACCACC TCGCTATCAA ATTGAAAGAC GCTCGCATGC GCGCCGGCGC CCTTTCCCTG
TCCTCTCCCG AACTTAAAAT CCACCTCGCT TCATCCGAAT CCGCTGAGCC TATCAACGTC
GAGCAAAAGA AGCTTCTTGA AACGAATAGT CTTGTAGAAG AGTTCATGCT GCTTGCCAAT
ATCTGGGTCG CCAAGAAGAT CCAAGAGGTT TTCCCGGCTA CTGCTGTTCT GAGAAGACAT
TCTCCGCCAC CAAAAACCAA TTTCGAGGTG CTGCAGGATA TCTTAATGAA GAGAAAGGGA
ATAACGCTTG ATGTGTCCAC CTCCAAGGCT TTGGCCGATT CCCTCGATGC TTGTGTTGTA
AGTCACTTTC CTGTAGTTCA TAGATGATTA CTGATAATAG GATAGATTGC TGGAGAACCA
GAATTCAACA CCCTTGTGAG GATTATGGCT ACACGATGCA TGCTTTCGGC AGAGTATTTC
TGTTCTGGAA GTGTATCCAA GGAGTCTTAT GGACATTATG GTTTGGCTAG CCCCATCTAC
ACCCATTTTA CTGTAAGTTA ATCCCACAAC TTTCCCAACG TTTACACTGA CAAGACACTC
GGCAGTCCCC AATCCGCCGA TATGCCGACG TCCTCGCGCA CCGCCAGCTT GCTGCGGCCA
TCAACTATAC CCCTCTCCAT CCCTCCCTTC AATCTAAATC CCATGTCGAA AGGATCTTGT
CTACTGTCAA CAAACGACAT AGGCTTGCGC AAATGGCCGG CAGGGCGAGT GTGGAATTCT
ATGTCAGTTT GACTTTGAAG GGTAAGGGTA CTGGCGAGGA GATTGGCGTG AGAAGGAAGG
AAGAGGCATG GGTCGTTAGA ACATTCAAGA ACGGTCTGGC GGTGTTTGTT CCCAAGTGAG
CACTTTTCTT TTTCTGCCTT CCTGTGCCTA CTTTTACAAT GGCTGACTTC ATATATAGGC
TCGGCTTGGA GGGACTTGTC ACTTTCCACA AGGAATTGCA CACCTATGAT GCCGAAAACT
ACACCATCTC CGTCCCTTCT CCATCTGGTG AGGTCGTTGT AGCGGTGTTT GACAAGATCA
TGGTAGATAT CTCCATCGAG AAGGATGAAA ACACTCAAAG GGGCAAGGTG AAGATGATTA
TGGTGGAGCC TGTCGATTCC GACACTTTGT AGAGTTGATC TAAATGAAGA AGGCTTCTTA
TAAATCATTA TGTATGATTA TAC
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| Protein sequence | MAAVKSHPPI TILKRTREDQ HLSQNKFLKK TARGKVINIF RERYVRDDIP CGYQDCHQCA
QFPGYKPVLP RTGYLQHTKF AGNGHYLVID TNIVLHQMDL LQSLPAQLPL IIPSTTIRET
RHRSLPLYNR LQQLIQDEDR LIWVWWNEER RETATVREVD EEHGREKIND RNDRAIRQTV
LFYAEHLSRL ASNAPSLILL TDDAANRGLA AEQGIVAVSA REYVDGLEPA EREKLVDLVV
GGVDEIEVVE RRSRRIYPDY LPQDTLLAGV KTGRYHQGHF NANQYNYLEG TVNVPGLVRP
VLLVGRQAMN RSVNGDVVVV EIFPETEWKA PREEVVDQDI ALRDDDVEDD ESGGVADKEF
VKEKQERLET DDAKKNKKEI LPTGRVVGIV KRNWRAYVCH LDRSSLSDSA FTSLAQQTVF
ATPLSRALPR IRLRTRQAPQ LVDQKILVTI DNWSPTSRYP DGHFVRALGK VASKEAEQES
LLLEYEVPYR PFGKAILNCL PAEGDNWVVP KKDMECLEWR DREDLRDLDI CSIDPPGCQD
IDDALHARRL PNGNIEAGVH IADVSHFVHP DNPMDSEAAS RGTTVYLVDK RIDMLPSLLG
TNLCSLRPFV ERLAFSVIWE LNQDAEVVDV RFVKSVISSK EAFTYEAAQL RKDDKSMNDP
LTNSIRLLNH LAIKLKDARM RAGALSLSSP ELKIHLASSE SAEPINVEQK KLLETNSLVE
EFMLLANIWV AKKIQEVFPA TAVLRRHSPP PKTNFEVLQD ILMKRKGITL DVSTSKALAD
SLDACVIAGE PEFNTLVRIM ATRCMLSAEY FCSGSVSKES YGHYGLASPI YTHFTSPIRR
YADVLAHRQL AAAINYTPLH PSLQSKSHVE RILSTVNKRH RLAQMAGRAS VEFYVSLTLK
GKGTGEEIGV RRKEEAWVVR TFKNGLAVFV PKLGLEGLVT FHKELHTYDA ENYTISVPSP
SGEVVVAVFD KIMVDISIEK DENTQRGKVK MIMVEPVDSD TL
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