Gene CND00710 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCND00710 
Symbol 
ID3257334 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006686 
Strand
Start bp197492 
End bp198092 
Gene Length601 bp 
Protein Length116 aa 
Translation table 
GC content48% 
IMG OID638256006 
Productprotein transporter, putative 
Protein accessionXP_570387 
Protein GI58266462 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG5122] Transport protein particle (TRAPP) complex subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCATCC ACGCTCTATG GATAATAAGC AAAGCAGGCG GTCTCGTCTT TTCCCGTTCT 
TACAGTGGTA CGTTTCCTAC TGTTCTCTTA TACAAGTACT AACCCCATCG CTCTTCCCGA
CCCTCATTTC ATACCATATT TCTAACCCGA CCCTATCTCA CCCCCAAAAA AAACACAAAC
AAACAAACAG ACGCTCTTCC TCAATTACCA GTCAACACCA TCCTCACGCT CGCCGGTATC
TTGCACGGTA TTCACGCTAT CACCGCACGT CTTACCCCTT CACCCGCTGC TTCCAGCCAA
AACCAGAGCC AAGGCCCAGG ATCTACAGGG GGGCTAGAGA GTTTCGAGGC TGAGGGATGG
GGTGGAAAGG TGTTTTTGAC TCCTACTGGT GAGTCTGGTC TTGGGTTTTT GTTTTGTCAT
GAGAGGGGGG GGTTAGGCGT ATGATGCAGT AAGCTGGGAG TAGGAATTGA AATGGATGCT
TAGCTGTGGA TGGGTAACGA TAACGACGAC CGGAGAGCAC TCGATGTCAT CCAAACCCAA
ACGAAAAGAA TACTTACTGA CCTTTTCTCT TTCTTCTCAA CTTTTCACCT TTTTGGGGTA
A
 
Protein sequence
MTIHALWIIS KAGGLVFSRS YSDALPQLPV NTILTLAGIL HGIHAITARL TPSPAASSQN 
QSQGPGSTGG LESFEAEGWG GKVFLTPTEH SMSSKPKRKE YLLTFSLSSQ LFTFLG