Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CND00710 |
Symbol | |
ID | 3257334 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006686 |
Strand | + |
Start bp | 197492 |
End bp | 198092 |
Gene Length | 601 bp |
Protein Length | 116 aa |
Translation table | |
GC content | 48% |
IMG OID | 638256006 |
Product | protein transporter, putative |
Protein accession | XP_570387 |
Protein GI | 58266462 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG5122] Transport protein particle (TRAPP) complex subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCATCC ACGCTCTATG GATAATAAGC AAAGCAGGCG GTCTCGTCTT TTCCCGTTCT TACAGTGGTA CGTTTCCTAC TGTTCTCTTA TACAAGTACT AACCCCATCG CTCTTCCCGA CCCTCATTTC ATACCATATT TCTAACCCGA CCCTATCTCA CCCCCAAAAA AAACACAAAC AAACAAACAG ACGCTCTTCC TCAATTACCA GTCAACACCA TCCTCACGCT CGCCGGTATC TTGCACGGTA TTCACGCTAT CACCGCACGT CTTACCCCTT CACCCGCTGC TTCCAGCCAA AACCAGAGCC AAGGCCCAGG ATCTACAGGG GGGCTAGAGA GTTTCGAGGC TGAGGGATGG GGTGGAAAGG TGTTTTTGAC TCCTACTGGT GAGTCTGGTC TTGGGTTTTT GTTTTGTCAT GAGAGGGGGG GGTTAGGCGT ATGATGCAGT AAGCTGGGAG TAGGAATTGA AATGGATGCT TAGCTGTGGA TGGGTAACGA TAACGACGAC CGGAGAGCAC TCGATGTCAT CCAAACCCAA ACGAAAAGAA TACTTACTGA CCTTTTCTCT TTCTTCTCAA CTTTTCACCT TTTTGGGGTA A
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Protein sequence | MTIHALWIIS KAGGLVFSRS YSDALPQLPV NTILTLAGIL HGIHAITARL TPSPAASSQN QSQGPGSTGG LESFEAEGWG GKVFLTPTEH SMSSKPKRKE YLLTFSLSSQ LFTFLG
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