Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CND00600 |
Symbol | |
ID | 3257171 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006686 |
Strand | + |
Start bp | 169004 |
End bp | 171405 |
Gene Length | 2402 bp |
Protein Length | 548 aa |
Translation table | |
GC content | 46% |
IMG OID | 638255995 |
Product | carboxypeptidase D, putative |
Protein accession | XP_570309 |
Protein GI | 58266306 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2939] Carboxypeptidase C (cathepsin A) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0283026 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TGCGTTCTGA CCACCAATAA GCAGCGCCTA TACCCGGTAC ACAAGACCGC AACCAACACC AATCGCATCC GTGCCCATTG CAGATCTGGC ACTCCTTTCA ATCAACTGTC ACCATTGGAA AGAATGCACT TATCGCACAT AGCCCATCTC TGGCGGCAAA GCAACAGAAG ATCCTCAAGA GGTGTGAATT TAGGATGTAT AAATACTACC CTATCGATCA TCCTCAAAGT CCCCATTGCT GTCTCGTCGT TCAGTTTTAG TCAACATATT GTGGGCGTCG TCTCTTAATA CCACGCTCTG CCTTGGATCC TAGTATCTAC GTACGCTACA ACAATCTACC ATGTGGTCCA AAGTAGTAAC GACTGCTTTG TTGGCTATCG CTCTGGGTTC GGTCATCGAA GCCGCCAGTG ATCCCTCCGC TCTGCGTGGT CGAGGACCAG CCGCTCTTGC CGCAAAAGAG GCTAAAAAGG AGGCTCCCGC TAACAACGCG TCGAATAGTG ACGCGTCGAA AATGGAAAAA TGCCGTGCAC TCCTGGAGAG GCACCCAAAA AGGAAGTTTT ACAACAACAG AACTTCCGGT ATGTAGCTCT TTCTCTACTG ACTACCAAAG TCCTTACAGT CTATTTCAGA ATTCCTCATC GAATCACTTC CTGAGGTCCC ATTCGACCTT GGTGAGGTTT ACAGCGGCCT CATACCTATC GATTACAACA ACCAGTCGGA AGCCCTTTTC TTCGTTTTCC AGCCGAAATT GGGAGAAGAC TCCGATGATC TCACAATTTG GCTCAACGGT GGTCCCGGAT GTAGCTCTCT AGAGGGATGG TTCCAAGAGA ACGGTTTATG GACTTGGCAA CCTGGAACGT ATGCGCCTGT TATCAACCCC TACTCATGGG TAAATTTGAC CAACATGCTC TGGTGAGTCT TTTTCACCAA CTCAGTTCAA TACGAGCCTT ATTTGTGGTG TAGGGTAGAG CAACCTATTG GCACTGGGTT CTCAATCGGT ACGCCTAAGG CTACGACAGA AGAAGAGATT GCCCAGGACT TTATCAAATG GTTCAAGAAC TTCCAGGATA CCTTTGGAAT CAAAAATTTT AAAATTTATG TCACAGGAGA ATCATATGCA GGTCGCTATG TACCCTATAT CGGCGCGGCA ATGTTGGACG CGCAAGACAA AACATATTAC AATCTTTCTG GTAAGTGGTA ATGCATTTCC AGCGTAGCAT TGTATTGAAT CAAATAGGGG CCCTTATGTA CGACCCTACT ATCGGCGAAT CTGTCTTTGT GCAAGAACAG ATCACTACTT ATCCTTTTGT CGAAGCCAAT GCCAACCTTT TCAACTTTAA CAAAACTACC ATGGCTGAAT TGAAAGATCT TCACGAGTTC TGCGGCTACA AGGAATATAT CGAGAGGTAC CTTACGTTTC CTCCGACTGA AAACCAGCCG CCTCTGTTTT TCGATTACTA TGATTTCGAT AACATAACGT GTGCCATCTT CGACATCGTC AATAATATGG CTTTACGGAT CAACCCTTGT TTCGACATTT ATGAAATTGT GAGCTGAAAT AAATGATTAC CTTTTGGGTC TTGTCACTAA TCGTGATTGT ATACAGAATC TCATGTGCCC TCTCCTGTGG GACGTCCTCG GTATGCCTAC TCAGCTCAGC TATGCCCCTG GTGGCATCTA CTTCAACAGA TCTGACGTTA AAGCCGCTAT TCACGCTCCC GAACATATTG ACTGGACTGC TTGTGCAACC AGGGCGGTCT TTGTTGGAGG CATAGAACAA GGACCTCAAG GTAGGGGTGA CTTGTCATTG GATCCTATCC AAAAGGTCTT GCCTCAAGTT ATCGAGGCTA CGAATAGGGT CTTGATAAGT AATGGTGACT ATGGTAAGTT TTACTGTTCA AACAAATCTT ACACACTTCT GAATTTCGTT CCAGATATGG TCATTATCAC CAATGGCACC CTTCTTGCTA TTCAGAATAT GACTTGGAAT GGATATCTTG GGTTCCAGTC ACCCCCCTCG GAAGACATCT TTATCGATAT TGTCGACACC CAGTGGTCAT CTATCTTTGA GAGTAACGGC TTCGATGGAT ACCCCGGTCC TCAGGGTGTG ATGGGCATTC AGGTGAGTCC CCACTACATG TTCTGATACA ATAAAATACT GACACATCAG TCTAGCACTA TGAGCGAGGT CTTATGTGGG CTGAAACTTT TCAATCAGGC CACATGCAGC CTCAATACCA ACCGCGATCT TCTTATAGGC ACCTGCAGTG GCTCCTTCGT CATGTAGACA GACTCTAAAA ATCTCTTCTA TCCACCTGGG TTTTGACTGG TTAGTCCTCC AAGCTGCAGT GCAGTTCATT TTGAAAGCTT AGGAAAATTA CTATTGGAAT GGAAGCGAAG AT
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Protein sequence | MWSKVVTTAL LAIALGSVIE AASDPSALRG RGPAALAAKE AKKEAPANNA SNSDASKMEK CRALLERHPK RKFYNNRTSE FLIESLPEVP FDLGEVYSGL IPIDYNNQSE ALFFVFQPKL GEDSDDLTIW LNGGPGCSSL EGWFQENGLW TWQPGTYAPV INPYSWVNLT NMLWVEQPIG TGFSIGTPKA TTEEEIAQDF IKWFKNFQDT FGIKNFKIYV TGESYAGRYV PYIGAAMLDA QDKTYYNLSG ALMYDPTIGE SVFVQEQITT YPFVEANANL FNFNKTTMAE LKDLHEFCGY KEYIERYLTF PPTENQPPLF FDYYDFDNIT CAIFDIVNNM ALRINPCFDI YEINLMCPLL WDVLGMPTQL SYAPGGIYFN RSDVKAAIHA PEHIDWTACA TRAVFVGGIE QGPQGRGDLS LDPIQKVLPQ VIEATNRVLI SNGDYDMVII TNGTLLAIQN MTWNGYLGFQ SPPSEDIFID IVDTQWSSIF ESNGFDGYPG PQGVMGIQHY ERGLMWAETF QSGHMQPQYQ PRSSYRHLQW LLRHVDRL
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