Gene CND00580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCND00580 
Symbol 
ID3257276 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006686 
Strand
Start bp165297 
End bp167663 
Gene Length2367 bp 
Protein Length739 aa 
Translation table 
GC content52% 
IMG OID638255993 
Productalkylbase DNA N-glycosylase, putative 
Protein accessionXP_570311 
Protein GI58266310 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG5574] RING-finger-containing E3 ubiquitin ligase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.308073 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CCCTTACAAT GCCACCCTCA ACCCATCCTC AATCTCGCTC CAAACCTCTC CTCAACATGG 
ACTCCGACCC GGCGTCATGG CTGAACTTCT CTCTTCCGCC ACGCGCAAGA TCAGGCGCGG
GTGTCCCCGG CTCTGGCGTC CCTGGTCCAC CACGCAGGAG CAGGAAAGGT GGCGAGGGCT
GGCGAGGTGG GGTATTGAGT AGAGAAAAGT ACCTCAATGC TTCATTCAAG TTTGTCTTAA
AACCGAGCGA GGCGTTGTCT TATGGAGCGC ATTTCGCTGA TCCAGATATG TAAGTTGCCA
CTTGGCTGTA GAACGTAGTC TCACGTGTAT GGTAGATCGT TACACTGGCC CAACATCTTG
CAGATACTTG TCCCGACGTT CAGCGCGCTG TCAGTAGCTC AAGGGTATGT ATCCGAGCCG
CATGCTGAAG GTGGTTATAC ATCACATGAT TTGGAGGAGA TGGGCGAGGA AGCAGCAGAG
CGGCGGCGGC GGATGGAGGA GGAGAAGCGG GGGAGGATGT GCCCTATTTG CTTGGGCAAA
CCAGTGGCAG GGAGGATGAC GAAGTGTGGA CATGTAAGTG TTGTTTATTT CTAGAAGGGG
TTACGCTGAC ACCGATCAGA TCTTCTGCTT TCCCTGTATT CTACACTACA TCCAACTCTC
TGACATTCCG AAATCTGCGA AATGTCCGAT ATGTGGAGAT ATGGTCCAGT CAAATGCGCT
CAAGAGTGTA AAGTATCTCG ACGCAGAGGC AATGTTAGAG TCTTCCACGC ATGCCACCAG
TGACGCCTTC GAAGCTTCAC TCGAAGAAGC CAAAAGGCTC GATTCGGGAG ATCGTCATGA
CAAACGACAT CGACTTCACA TGCGCTTGAT TCAACGTCCC CAGATGACTA CTCTTGCTTT
GCCTTCCTCT TCGACCTGGC CTTCCGACGC TGTACCCCCG CACACCGCAC CGTGGTATTT
CTTGCCCGAT ATTATCACTT ATAGCCGGTA CATGCTGGCT ACACCTGAGT ATATGGGCAA
GGAACTAGAA CGGGAGATGA AAGAGTTGGG GGGAGAGTGG GAACTGCTAA GAGGGGATGA
GCTGGGAAGG GTGTTTGTCA AGGCTGCGAT GGACAAGGTT GAGCGGCAGA TGATCAAGGT
GAAAGAAGAG CTTGAGACGG AGTTGGTTAG AAGGTCTGAG AGAAAAGGAA GAGAGGCGTG
GAGTTCGGCG ATCGGCGGGG ATAAGAAAGA GAAAGAGCAA CAGAAGGAGA GGGAAAGGAA
AGAGCAAGAA CGGATGAAGC GAGAGAAACA GCAAGACATT GGAGCGGTCC CTGTGGAATT
CCTTGCGAAC CAACAAACTA CATTTGATAA CTCTGCCAAT ATAAATATCC CTCCAAATCT
CCCTGTCGAA CCGAACCCGA TGCCACCCAT GCCTCGAGAT AAAAAATCTC GTCGCCGACT
TAACCCTGTT CCACCTCCTC AGTCTGTCCC TCCTGCTCCG TCATACTACT TTTATCAATC
CTCCCTTGGC GCAAATGTAT TCTTACATCC ACTCGACATC CGCATGTTGC TCGCCCACTA
TGGATCATAC AATCTCTTTC CTTCCAGCAT GACCTTTGAA ACAACGGGCT ATGATCCTGG
GACGATTAAC GACGATCTCC GTAAACGGTG CAAATACCTC TCTCATCTTC CTCTCGGCTC
CGAAATTGTC TTTGTTGAAA CCAATCTGGC CGAACTTGTC TCCTCTACCA TCCTGGCCCA
ATTCGAGCAA CCTCTCAAAG CGCGTAGACA AAAACGCAGA GACAAGGTGC GAAAGGAAGA
TCGGGCAAAA CAAAAATGGG AAAAGGCCGA ACGGTCAAAA ACGGCAGAGG AGCTACAGAG
TGTCAGGAGC GTACCGAGCG CGTTTGTGCG CGGTGGGGTG GAAGAGGATA GGGAGTTGGA
ATTGGCGTTG GCAAGGTCGG CGGTGGAGTT TGAGCAAAAT TTCCCGGTGG CGTACCCCCA
ACCTGGGATA GCGTCTTCCC CACCTCGATC GGGGTCTTGG GGTCAGACTC CAATCCAAAC
CCAGAGCGAG AGCCAGCAAG ACCAACAGAG GAGTTTTGCA ACAGCCCTTC ATCAGAGGTA
CGACCCTTCT CTCTCGAGGT CGAGGAGGGA AGTCGATCCC GAGGTGGATG CGTTGTGGCA
GCAGTTTGAG TCGACGGATG TGCATTTGGA GCCGAGTATG GGTGCGAATG CCGGCGCGGG
TACCGGAGCA GGTGTGAGAG AGAGTGAGAG AGGGAATGGG AGGAAGAAGA AGGAAAAAGG
AAAAAAGCTG ATCTTGGGTG GGGGTGGACG TCGGGCGTGA AAGATGGGTC AGAAGTCATA
AAGTATAGTC ATTAGATAAA CTATCAT
 
Protein sequence
MPPSTHPQSR SKPLLNMDSD PASWLNFSLP PRARSGAGVP GSGVPGPPRR SRKGGEGWRG 
GVLSREKYLN ASFKFVLKPS EALSYGAHFA DPDISLHWPN ILQILVPTFS ALSVAQGYVS
EPHAEGGYTS HDLEEMGEEA AERRRRMEEE KRGRMCPICL GKPVAGRMTK CGHIFCFPCI
LHYIQLSDIP KSAKCPICGD MVQSNALKSV KYLDAEAMLE SSTHATSDAF EASLEEAKRL
DSGDRHDKRH RLHMRLIQRP QMTTLALPSS STWPSDAVPP HTAPWYFLPD IITYSRYMLA
TPEYMGKELE REMKELGGEW ELLRGDELGR VFVKAAMDKV ERQMIKVKEE LETELVRRSE
RKGREAWSSA IGGDKKEKEQ QKERERKEQE RMKREKQQDI GAVPVEFLAN QQTTFDNSAN
INIPPNLPVE PNPMPPMPRD KKSRRRLNPV PPPQSVPPAP SYYFYQSSLG ANVFLHPLDI
RMLLAHYGSY NLFPSSMTFE TTGYDPGTIN DDLRKRCKYL SHLPLGSEIV FVETNLAELV
SSTILAQFEQ PLKARRQKRR DKVRKEDRAK QKWEKAERSK TAEELQSVRS VPSAFVRGGV
EEDRELELAL ARSAVEFEQN FPVAYPQPGI ASSPPRSGSW GQTPIQTQSE SQQDQQRSFA
TALHQRYDPS LSRSRREVDP EVDALWQQFE STDVHLEPSM GANAGAGTGA GVRESERGNG
RKKKEKGKKL ILGGGGRRA