Gene CND00570 details

Gene Information

• Locus tag: CND00570
• ID: 3256881
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006686
• Strand: -
• Start bp: 162955
• End bp: 165099
• Gene Length: 2145 bp
• Protein Length: 550 aa
• GC content: 47%
• IMG OID: 638255992
• Product: transcription factor, putative
• Protein accession: XP_570313
• Protein GI: 58266314
• COG category: [R] General function prediction only
• COG ID: [COG2319] FOG: WD40 repeat

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 0.414146
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CTTACCATCT CCAACGGACT CGCACGGCAA CCTTCATCTT TCACTACTCT ATAAGTAATC 
CCCGTATAAC TCTACTCATT CAACCCTAGT CACACTACAA GATGGAGGGC TTCGACCTCC 
CTATGAGTTT TGGCAAAAAA TCCAAGGCAG GAAACTCGAA CCTCAAGGCG AAGGTGGAGA 
ACACGAAGCG AGCAGACATC CCTACACCAG TTAAAGAAGA AAAGCCTGAA GAAGAAGTAC 
CAGGACCTTC AATATCTACA TCAGGGAGGA AGACAGAGGC CGAGGAGGAA GACGACGAGG 
AGATTGGGCC CATACCGCCT TCTGCGACTG GAAAGCGTAA GGCTGAGGAG AATGATGCGA 
GTGATGATGA GCAAGAGGCA GAAGAAGAGG TTGATAGGCT ACCTATATCG CATGAGATTA 
TCCTGAAAGA TCACACAAAG GTATATGATT TCATGATCAA ATTACAGCTC CTCGGAGGCT 
GATTGTTTTC GACAGGTCGT CTCTGCCCTT GCGGTCGATC CTTCTGGTGC TCGTATCGCT 
ACTGGTTCGC ACGACTATGA TACGAAACTC TGGGATTTTG GTGGTATGGA CCATCGCTTA 
AAACCATTCA AGAGCTTTGA AGCGAATGGG AATTACTACG TGCGTTTATT TTTGGTCAAT 
CACTCTGTTA TCGTATTAAC GCGATCATAG GTTCATGACT TATCATACTC TCCTGACGGC 
CAACAACTCC TTGTAATATC GGGAACTGTG CATCCAAAAG TGTTTAACCG TAATGGTGAG 
GACGAGTGGG TATTCTCTTT TCCATCTATA CATCGAGCTG ACATCGCCCA GGATGGAATT 
CAACAAGGGT GACGTCTATC TGCGCGATAT GAAGAATACC AAGTGCGTCT TTCCTTTCAT 
AGCAGACCAA CGGATGATTC ATCGTATTCA GTGGCCATAC TGCCGAAATC AATGCTGGTG 
CTTGGCACCC TACAGATAAA TCCATCTTCC TCACCTGCTC CAACGACTCT ACACTCAGAA 
TATGGGACAC ATCAAATAAA CGAAAGCAGA AACAGGTCAT CGTTGTTAAA TCCAAAGAAC 
GTGGTGCCCG AACTAAAGTG ACGGCCTGCG CTTGGAGTCC AGATGGTAAA TGGATCGCTG 
GAGGTAAGCC GCCCCTTCTT CCGTCTCAAT AAAAATGACG ACACTAATAA TACATGGGCA 
GTTTGTTTGG ATGGAACATT GCACATCTGG GATACTTCGT CAAACTTTGC GCGACCAAAA 
TATTCTTGCG AGAATGCCCA TCCAAAGAAC ACTGAGACGA CTGGTGTCGC ATTCTCCAGG 
GATGGGCTCA GAGTTGCTAC TCGAGGGGGG GACGATACAG TTAAGCGTCA GTGCCCTTGT 
CTCTTAATTA AACATCATTC TTACCTCTTA GTGTAGTTTG GGACATCCGC TCAATTCGAA 
ACCCTCTGGC TGTCGCTAAA AACCTCGACA ATCTTTACCC CGAAACTAAT ATCATCTTCT 
CCCCTGACGA CACCCAAATC CTGACCGGTA CCGCTGCTCC CAAGGGCCAA AAAGGCGGCT 
TGGTATTCTT GAACAGCAAG GACCTGAAAG AAGAGCGGCG GATCGCTATC GGGGATGGAA 
GTGTAGTGAG AGTTTTGTGG CATTCACGTA TCAACCAAAT CTTCGCCACC CTCTCCACAG 
GCGGTGTTCA CGTTCTCTAT TCTCCCAATT CATCTATTCA CGGTGCCCTT CTCCCTCTCG 
CCAAGCTCCC CAAAACCGCC CCACGCGATC CATCCTTCTC CACTGTCGAT CTTAAACCCG 
TCATCTACAC TCCTGATGCT TTACCGATGT ATCAGGAACA AGGCCATAGG GAGAGTTTGC 
ATCAGAAGGA GAAGAAGGCG AAGAAGATGA AGCCGATGGA ACCTGTTAGT GGTGTGGGTA 
GGGCAGGAAG GCTAGGAGCG AGTGAGACGC AGAGCTTTGT GCATAGCATG TACCCCGAAA 
CGCTCAAATT TGAGGATGTA AGTTTCTTTT CCCTTTTCTA TCCTTTCTTG ACTGGAGACT 
GACATCTCTA ATTTTGATAG CCGAGAGAAG CGTTGCTCAA GTACGCGAGC AAAGAAGAAC 
AGGAGAAGAA GAAACAGGAG ATGTAGACGA TAGTCTTAGT ATTAA 

 

Protein sequence

MEGFDLPMSF GKKSKAGNSN LKAKVENTKR ADIPTPVKEE KPEEEVPGPS ISTSGRKTEA 
EEEDDEEIGP IPPSATGKRK AEENDASDDE QEAEEEVDRL PISHEIILKD HTKVVSALAV 
DPSGARIATG SHDYDTKLWD FGGMDHRLKP FKSFEANGNY YVHDLSYSPD GQQLLVISGT 
VHPKVFNRNG EDEMEFNKGD VYLRDMKNTN GHTAEINAGA WHPTDKSIFL TCSNDSTLRI 
WDTSNKRKQK QVIVVKSKER GARTKVTACA WSPDGKWIAG VCLDGTLHIW DTSSNFARPK 
YSCENAHPKN TETTGVAFSR DGLRVATRGG DDTVKLWDIR SIRNPLAVAK NLDNLYPETN 
IIFSPDDTQI LTGTAAPKGQ KGGLVFLNSK DLKEERRIAI GDGSVVRVLW HSRINQIFAT 
LSTGGVHVLY SPNSSIHGAL LPLAKLPKTA PRDPSFSTVD LKPVIYTPDA LPMYQEQGHR 
ESLHQKEKKA KKMKPMEPVS GVGRAGRLGA SETQSFVHSM YPETLKFEDP REALLKYASK 
EEQEKKKQEM