Gene CND00560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCND00560 
Symbol 
ID3257373 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006686 
Strand
Start bp161021 
End bp162689 
Gene Length1669 bp 
Protein Length324 aa 
Translation table 
GC content48% 
IMG OID638255991 
Producthypothetical protein 
Protein accessionXP_570458 
Protein GI58266604 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.911318 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ACTACTCACA CCAATTACTC ACGCTCTTTA CCCCACACTC TTTTACTTTT CCGTTAGATC 
CTAATTCGAC GCATCTCCGT CCTCACACCA TGTCTCACTC ACACATCCAT AACACTTTTG
CACCCTCGAC ACTCACTAAC CCATTTGCTC CTGCTCCTCT TCGACCCAGA GCTTCAGGTA
ACGGCGTCAT AGGAAATGTT CTCTCCGCCC CTCACGACAC TGACGATGGG TCTTATGCGG
ATAACGCTAT CATCCCGAAA TTGCACTCTG ATACTAGGAA ACCTGTCGAT CGTTCAGATC
CAAAAGTCTC CCAAGTTGCC AGTGCCGTAG TGCAAAACGT AAAAAGTTCC GAGGGCGAAG
CCGCCGTCCA TGCGAACCAT CAACATGGTC CATATGGTAG ACAACCTGTT GGTTTCCTCA
CTCCGAACGT GCAACGTAAT CAAGGCTATG GATCTCATGA TTACACTCAA AATTCCAATA
GCATCCCATC TACCAATGGT CTCGGACTTG CTTCTAGTCC CCAGAGGCAA AAGCAATCAG
ACACAAATGC TCAAGCCGAA CATTCTCAAT CTGTTCCTAA CCAGTCACGC ACCCAACCCA
CACATGGTAA CTACCCACCT ATCCGCAATG TCCCACCCGC AATCACTACC GGTCTCGTCC
CACCACTCTC TATCCTTCTC CCAGCCCCAG CATCTCCCAT CTGCCCGCTC CTTGCTGCCC
CCCCTCAAGC ACATTACTCG CCCCTCCCCT TTCCTTCCTC GCCGCACCCA TCTCCGCATC
GCACTACCCC TTCCTCCTCC CCTTCGACCC CGAAACATAT CTTGGCCCAC GCCCGAGCCT
CAACTACATC CGAATCCATA AGGGGGTTCG ACCTTTTAGC GGAGAAAAAG GCGTCCTTCA
GGGAAGGAGA AGAAGAACTG ATGACGCCAT TTTCTCCGAG ACCGAGGAAT AAACCGAGTG
CACTGAGAGA TGGGTTGCGA GCGAGTGGAG CAGACTTTTG GAAGAGATAT AGTGTGAGTG
TAAGGCTAGA TGAAATTGAT AAGCAAAAAG GACCCTCTAG GTGAATAACT TGTTCATTTA
CTTTAGGAAT GAACATGGCT AAAACCATGG GTGCTAGTGA TTGGTTATCC AAAGCCCAAG
CGAACAGAGG TATACTCAAG AAGATGGCCT GGTCGTTCAC TTTGATGGCA AGTCTTTATT
CCACTCCATC ACATCCCATC CCATCCTGTC GAATTACCAG AGCAAACTTT GTAAACAAGT
GTATCACGAC GAACAGAACT GATGGTTAGA ACAGACTCTA GTTATAGTCG CGATCATTGT
CGTTGTTGTT GTGGTCACCA ATAATAAGAG CGATAACAGT TCCAAAACCA AAAGCAACCT
TTAGGGCTCA TTCCTGATTC CCACTGCTCA CTTGAACTTT TGAAAGGCGG CAGACCGACT
GTTTCGCCAA GTCCGAACCT TTTTGGCAAT CCTTGGCTGC CTCAGCCTCG CAGGTGCCTA
ATCAAATCAA AAAAAAAGAG GACGACTAGA AACATATAGG TAACATGTAC ATTATATGTA
GAACCTAAAA TCTGTATCAC CTGGACTTTA TTCTATGGCC CTTCGGACAT TTTTCTGTGA
TTGTACGGTC GCCCTTATAC TTTCTATACC CAGCCTAGCA GAGGCTTAT
 
Protein sequence
MSHSHIHNTF APSTLTNPFA PAPLRPRASG NGVIGNVLSA PHDTDDGSYA DNAIIPKLHS 
DTRKPVDRSD PKVSQVASAV VQNVKSSEGE AAVHANHQHG PYGRQPVGFL TPNVQRNQGY
GSHDYTQNSN SIPSTNGLGL ASSPQRQKQS DTNAQAEHSQ SVPNQSRTQP THGNYPPIRN
VPPAITTGLV PPLSILLPAP ASPICPLLAA PPQAHYSPLP FPSSPHPSPH RTTPSSSPST
PKHILAHARA STTSESIRGF DLLAEKKASF REGEEELMTP FSPRPRNKPS ALRDGLRASG
ADFWKRYSVS VRLDEIDKQK GPSR