Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CND00560 |
Symbol | |
ID | 3257373 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006686 |
Strand | + |
Start bp | 161021 |
End bp | 162689 |
Gene Length | 1669 bp |
Protein Length | 324 aa |
Translation table | |
GC content | 48% |
IMG OID | 638255991 |
Product | hypothetical protein |
Protein accession | XP_570458 |
Protein GI | 58266604 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.911318 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ACTACTCACA CCAATTACTC ACGCTCTTTA CCCCACACTC TTTTACTTTT CCGTTAGATC CTAATTCGAC GCATCTCCGT CCTCACACCA TGTCTCACTC ACACATCCAT AACACTTTTG CACCCTCGAC ACTCACTAAC CCATTTGCTC CTGCTCCTCT TCGACCCAGA GCTTCAGGTA ACGGCGTCAT AGGAAATGTT CTCTCCGCCC CTCACGACAC TGACGATGGG TCTTATGCGG ATAACGCTAT CATCCCGAAA TTGCACTCTG ATACTAGGAA ACCTGTCGAT CGTTCAGATC CAAAAGTCTC CCAAGTTGCC AGTGCCGTAG TGCAAAACGT AAAAAGTTCC GAGGGCGAAG CCGCCGTCCA TGCGAACCAT CAACATGGTC CATATGGTAG ACAACCTGTT GGTTTCCTCA CTCCGAACGT GCAACGTAAT CAAGGCTATG GATCTCATGA TTACACTCAA AATTCCAATA GCATCCCATC TACCAATGGT CTCGGACTTG CTTCTAGTCC CCAGAGGCAA AAGCAATCAG ACACAAATGC TCAAGCCGAA CATTCTCAAT CTGTTCCTAA CCAGTCACGC ACCCAACCCA CACATGGTAA CTACCCACCT ATCCGCAATG TCCCACCCGC AATCACTACC GGTCTCGTCC CACCACTCTC TATCCTTCTC CCAGCCCCAG CATCTCCCAT CTGCCCGCTC CTTGCTGCCC CCCCTCAAGC ACATTACTCG CCCCTCCCCT TTCCTTCCTC GCCGCACCCA TCTCCGCATC GCACTACCCC TTCCTCCTCC CCTTCGACCC CGAAACATAT CTTGGCCCAC GCCCGAGCCT CAACTACATC CGAATCCATA AGGGGGTTCG ACCTTTTAGC GGAGAAAAAG GCGTCCTTCA GGGAAGGAGA AGAAGAACTG ATGACGCCAT TTTCTCCGAG ACCGAGGAAT AAACCGAGTG CACTGAGAGA TGGGTTGCGA GCGAGTGGAG CAGACTTTTG GAAGAGATAT AGTGTGAGTG TAAGGCTAGA TGAAATTGAT AAGCAAAAAG GACCCTCTAG GTGAATAACT TGTTCATTTA CTTTAGGAAT GAACATGGCT AAAACCATGG GTGCTAGTGA TTGGTTATCC AAAGCCCAAG CGAACAGAGG TATACTCAAG AAGATGGCCT GGTCGTTCAC TTTGATGGCA AGTCTTTATT CCACTCCATC ACATCCCATC CCATCCTGTC GAATTACCAG AGCAAACTTT GTAAACAAGT GTATCACGAC GAACAGAACT GATGGTTAGA ACAGACTCTA GTTATAGTCG CGATCATTGT CGTTGTTGTT GTGGTCACCA ATAATAAGAG CGATAACAGT TCCAAAACCA AAAGCAACCT TTAGGGCTCA TTCCTGATTC CCACTGCTCA CTTGAACTTT TGAAAGGCGG CAGACCGACT GTTTCGCCAA GTCCGAACCT TTTTGGCAAT CCTTGGCTGC CTCAGCCTCG CAGGTGCCTA ATCAAATCAA AAAAAAAGAG GACGACTAGA AACATATAGG TAACATGTAC ATTATATGTA GAACCTAAAA TCTGTATCAC CTGGACTTTA TTCTATGGCC CTTCGGACAT TTTTCTGTGA TTGTACGGTC GCCCTTATAC TTTCTATACC CAGCCTAGCA GAGGCTTAT
|
Protein sequence | MSHSHIHNTF APSTLTNPFA PAPLRPRASG NGVIGNVLSA PHDTDDGSYA DNAIIPKLHS DTRKPVDRSD PKVSQVASAV VQNVKSSEGE AAVHANHQHG PYGRQPVGFL TPNVQRNQGY GSHDYTQNSN SIPSTNGLGL ASSPQRQKQS DTNAQAEHSQ SVPNQSRTQP THGNYPPIRN VPPAITTGLV PPLSILLPAP ASPICPLLAA PPQAHYSPLP FPSSPHPSPH RTTPSSSPST PKHILAHARA STTSESIRGF DLLAEKKASF REGEEELMTP FSPRPRNKPS ALRDGLRASG ADFWKRYSVS VRLDEIDKQK GPSR
|
| |