Gene CND00460 details

Gene Information

• Locus tag: CND00460
• ID: 3257299
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006686
• Strand: -
• Start bp: 131389
• End bp: 137950
• Gene Length: 6562 bp
• Protein Length: 1941 aa
• GC content: 48%
• IMG OID: 638255983
• Product: nucleolus protein, putative
• Protein accession: XP_570368
• Protein GI: 58266424

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.870046
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCCCCAA AACGCAAGTG GCAGGAAGGT CAGGAAGATG CTCTGCCTAC TATTATAAGG 
GCTAAGCCGG GAACGAAGGC CTTTGCATCA GGGAAGTCGG TCAAAGATGC CCTCGCGACT 
GGCTCCCCTC AAGGTATGTT GGCCATTGCC AGGTGATATC AAGCTAACAC CTGTACAGCC 
TTTGTTTCTT TCAGACAGCA GATTGTAACT CCATATTCCG AATTACCCCT TTCCATCAAC 
CACCCAACTG TGATTATCCT GCAACATTAC CTCGACATCT CCCCAGCTTG CGATGAGATC 
TTTCGAGCAT GGCAAGTCGG AGAGCAGGTG AATAAAATCT ATTCATTATA AAGACGGCTA 
TTGATTATTG TTCAGACAAA GAGCGAGCAG CAAGTTCATG CCGCTGTGGA ACTGCTTTCT 
GAGATTATTC AAGTGTTGAC ACCCGTGCCT TTCTTCCGTT CAATTGTGAT TGGTCTCGTC 
AACAAAGTCA TCTCTCCTTC TGAACCCTAT CACGACCATG TAAGTGATTT CAAGGACAAG 
TGGGCCATTA TTGACACAGA ACTTAGATCA ACCATCTCAT CCAATCTGGC AAACGAGACG 
ATGTCTATCA CGGTCTTCTT TTGTCGGCCG TATCTATGTC TGTTGACCCT CCTTCCACGT 
CTTCGATGTC GGGTAGACTC GGTATGAAGT TTTGGAACAC CCTTGTAGAA GGAGGCTCCG 
TTAGAGGATT TGGGAAGCAG ATGGGTATGA GAAGACGAAA CAAAGAGGGG ATGGTTGGAT 
ATGGCGACCG AGATCCACTT GACAAACCAG ATATTCGTCA CCTCATCCTC CGGATCATCC 
TCCCTCTTTT CCCTTCGCCT TCATTCCAGC CTCATGCTAA AATCATTCTC CCTCCATTAT 
ATTCCAACCT TGCCGCTGAT CCTCCTATAA CTGTCCTCCG CATCTTGACA GCCCTCTGGG 
CAGCAATCTC TTCCCCTTCA TTTGGATTAA ACCGACGAGT TAGTTTGGTT CTTTTCCAAG 
AAAGAAGCAT TGAAGCCCTT TGGGGTCAAT TGGGAAGAGA TGATGTAGAA GGCAAAAGTG 
GTAAAAAAGT CGGCGAGTTG GTGCGCGCTT TCCTCGAAGG TATCACCGCT ACCCCAGGAA 
AAGGTGTATG TTTCCCTGAT GAAGGATGGT ACCCTCGTCG AATGGATGAC TCCAAGGAAG 
GTGATAATAA GGTCGGAGAT GGAGGAGATA CTTGGAGAAA AGGTTTACAT AACAGAATTC 
TAGGGAACGT AGTGCGAAAG GTGGGAAATA AGGTGGTTGA TGATGAAGGA ATTGTGGGCG 
AATGGATGAT TGAAGTATTC AGGGCTTGTC CTGAGCTTGT CTCTGGGTAT GAAATTGCTT 
TATCCCATTG ATGCTTACTG CTGACCATGA ACAGATATTG GGCACACTCT GCACTGTCTC 
TCGAACCTCG TCTCAACGTT CGATGGATGG CGACCATGTC TTACGTTGGT CGTATCATCT 
CCCTTCCCAT CCCTCCCCTT CAAACTTTCC GACAACCCGT TCCTGCAGGC ACCGACCCCT 
CCTTTTCCCC ATTTCGAACT GCACCCCCTC AGGCGTCAAC GATCGTCGAA AGTGTCTTAC 
CTGCACCCTT CACGAAATCT CACTTGATGA AAGGTCTCCA ACATACCGAA GGGATAGTCC 
AACATATGAC TGCTGTCACT CTCTCTCGTG CCCTTGCGAA ACTCGGCCAA GTCCAAGAAC 
TCTTTTCGTT CATTGAATCA GAGCTCTACC CTAACGGGCA ACCTGATAAC CCATGGGCAA 
GAAGGCAGAG AGAGCTCGAA ATGGAAGTAA GGAAACGTTT ACCAGAGCTG GCAGTCATTG 
TTGCATTTGC GCAAAAGTCT GCCCAACTTG CGCCTGCAGA GCCGGATCCT GATAGCGAAG 
AAGATCGAGC TCTTGTCACA AAGTCCGCAA TGCTCACTGA GCTGGCTCTT CGAATATTTT 
CTTTGTGCAA CAGAACTCTC CCCTCGATGG CTTCTGAGCT CAAGTTTGAT GTCGGTCGTC 
TCCTCGTCTC GTCTTCGAGT GCAAAACAGG AGAAGAAGGA GAAACAGCAG GCGAGAGAAG 
GAAGTGTTAT TGGAGATGAC GTGCAAAGTG TAAAATCCAT TGGTACTGTG GGCAGTAAGG 
GGACTATCGG TATGCGAGGA GGTTTCGGTC AATCAAGAGG AGAGGTGGAA GGCTTTGAAG 
CTCTTAGTCA AGTCCATGTG CTTGAGTTGC TAGGGGAGGT TAGAGATTGG AATTGGAGCA 
ATAAAGCTGG TATGTGCTTG AACGGAAATT GTTGGGAAGT TCGCTGATAA GTACATAAGC 
GGGATCTCAA TACACTTACC TCTACCACAT TCTCCTTCTT CACCTCTCCA CTCCCCAATC 
GGTAACCTAC TCCAAAACAA CTGCTCTTCT CTCCCACCTT TTACTACCCA CCCTCTTATT 
CGAACACGAC CCTGAGGAAC TCCCCATTTG GCTGGATGCG ATGCCTAAGA AGGTCAGAGA 
AGCTGGACCT ATGCTGTTCG CTCAGCAGAT TCAGCTTTTG GCTTTCTTGG ATGACTGTTT 
CAGGAGATGT TTGAAGACGC CTTACCGATA CATTGAAGAC ACCCTCGCTC TCTCCCCTTC 
TTCAACCCCT GATCTTCAGA GCAATTCTAA GGAGATGGTT AGCCCTCTCA TGATGACCAT 
CCTTGAGCAG CTCTCTGCAA AGCTTATGGG TCAGCTCATT TCCACGGAAG CTGCCTGCAT 
CATTGTCAAC TATCTCCGTC GAGTAGTCCT AGGTTTGGTG GGCAAGCAAC GAGAATTGAG 
TTGGTTGTTG GCTGTGTTGA ACAGGCTAGA GGAATGTGTG AAGAAGGCGA AGGAGGCCGG 
GCAAGAGAGG AAAGGCTTGG AGGAATGCGT TCAAGTGATA AAAGGCGATT TCGATGTGAT 
CAGGGGCAAA TCCGAACCTA CCGACGGTAA GCTACTTCCT CTTCCGTTAG AAAATGTCTA 
CTAATCAAAG TCGATTGTAG AGCAAGATCC TTCTCTTCCT CAACTTCTTG ACCACCGTGA 
ATGGTCGTCG TCTTCCTTCG AGTACCAAGC ACTTTTCATT GGTCGACCGT CAACATTGTC 
ATCCTTAATT TTTCTTATTG AAAGAAAAGA TGCTTCCATC CTCCTTCATG TCAATTTTCT 
CATTCATCTC AACATTCTTC AGCCATCGTC TACTTCTGCT ATCAAAAACC AGGATAGTAC 
CCAGGCCGTA CTGATTCTCT TCGCCAGGTC TCTGGAGAAC TTGGAAGGTG CAAGCAAGTG 
GCAAGATCAG ATCAAGAGGA ATGTGTTTGG TGACCTTGGT TCAAGAAAGT TACTCTTTAG 
CGAAGATGGT CACGAGTTTA GAGATAGTGA GTTCATGCTT GTACAGTAAG GCAGAGCACA 
AGACTGACAT AGTTGTCAGG CCTGAACACT CTGATCAGGC ACTTGATCTT TGGAAAGTCG 
ACGGATGAGG AGATCGCTCA AGGGTTTGTC GATGGTTGTG TGGAATTGCT CGACAATGAC 
AAGGAAGGGA AGAAGGTAGA TCAAGTATGT TGCGCTTGAT GGATGTCTTT TGTTATGTGC 
TGACCAATTT CGCAGAATCT CAGCCTATTA GCTCCCTGGG TCCGATTTCT TACGCCTTCT 
CAAGCATCTC AAATATCCCA AATCCTCTTC CGCTACAAGA ACCCTGTCCT TTTTTCTCAT 
GCTCTTCTGC TCTCGGATAT CATCACATCA ACCAAGTCAC CTGCATTTGC CGTTGAGCAT 
TTGGGCAAAC TGGGAGAGTT GGGAGTCGTG GGGGCAGTAA TCAGACTCGT CGACGACGCC 
GTAAAGGATA GGAAGTCTAG TGAAGAGCTG ACTAGCCTCA AAATCAAGCG CGAGACAATC 
CAACTGCTTC TCAATCTTGC TAGCAACGAC TCCATCTCTT TACTGGTCAG ATTGATCCAG 
GCAAATTCTT CTGCGGCCGA GGTGACATCC TCTGCATTGC AAGAAGACGA AGCTTTAACA 
AACGACAGAA GGTTATTGCC GGTGGCTGAG GCTCTTTTTG TTCTAGGGCT TGATGTCGGA 
AAGGCCAGTA TCATTGGTGG TGTCGCTTTG GAGACGATTG CTTCCGAACA GGACGAAAAG 
GTCCAGGGCG CAGCAATCGA AGTATTGGTC CGTTTGGCTG AATCTGCATC CAACGAGATC 
GTTGAGATCC TCTCTACGGT TCAGTTGTCC TCTTTCAACT CCACTTTCAT GCGATTCATG 
GAACGCCTTG CTCACATATG CGGGACGAAA ATCGAGCTGC TGGAAAGCAT TTGTCATCTG 
ATTGGTTTGG GATTGCAATA TGCTGTCAGA CTCTGTTCTA ATCTGAAAGA CATGAATGAA 
GAAAGTGCCA CAGCTTTGAA GAGTCTCGGT GTGTTTAATC GTCCTTATAC TCGGCCGAAG 
CTAATGTTTG ATAATAGAAC AATCAATCGA AGTTGTTGAC CAAGATCGAC TCCAGTTGCA 
AGTTGCGTTG GTCGAACCTG TCATCACTGC TGTTATTCAA GACAGGCTAG AAATTGCTGA 
AGCTGTAGGT CTAGCCACGC TTCTTGCTGT CCGTGTCGAA TTAAAGGTAA GTTCTGTCCT 
TTGCGCGGCT GTTGAATCAG TGCTGATCTT TTTGATAGGC AAGTTTCCTT CGACAACAAC 
TCCAAGCCAT CTACGCTTCC ACCACCTACA CTCGCTGCAC CAACAGCTCT TGCCCGCCCC 
ATATTCGTCT CCACTTTATT CGTCTCCTCC ATAGACTTTT TGCCTCATCG ACCTATGTGT 
CTTGTCAGCC TCCATTTATC GAACCTCTGA TTTTACTGTA CCGCGGCACG ACTTCTGAAG 
TGGATAGGCG AGTGTTGCAC ATGCTGCAAT TGTTCGAAGG CTATAGGAAA ATTTCGCTTG 
CCAGCGTTAT GAGGTATTGG AACGCGAGTG GAGTACTTGG TATCGGAGGC AAGTCCTTGG 
ATGCCTTGAC AAGTTTGGAC CCTCAAAAGA CGTTTGCAAC CTGTCAAGCA TACCCTCTTC 
ATCGAAAGCT CCGTGGATGG GGCAAGATCG CAACTGACCC CGAGGAAGGC GAGGAATTGT 
ATGATCCTGT TTTCGTCATG GGACTCTTCA TTGCTTCTAT GCATGAAGGC ATGAGAGGTT 
TGGACTGGGT CGAAGTATTG AGGAGCAACG TTCTAGGTTT GACTGTTTGC GGACTGTCAT 
CTAGGGACAG AGAAGTGAGA AGTGTAGCTT CGTATGCTTT GGCCAAAACA ATGAGTCTCA 
TTGAGGTGAG TGCATCCTGT ATAAGGAAGC AAGGAGTTGT TAACGAAGTT CATAGACCAC 
TGGTTTTTTT GAACGAGCGC AACTCATATA CACCCTTCGA CTTCTTCGAC ATGCTCTTCC 
TACGTCAACA TCTCGTCTAC CAGTACTCTC TACACTCTTT TTCGCTTACG CCCTTCGCTC 
CCTTGCGAAC CCTTCTCATT TCTTTTATCC TCTGTCTTCT CGCTTCCTAT TACAAAGATC 
TGTCTTCGAC AGCGAAGACA CCCCATTGCT TTATGGAATG CTTTACGCCA ACGGAGAAGG 
GTGGAAGAGG GAAAGAAGTT GGATGGTTAG ATTCTTGAAG GAGGGTGTCA GAAGTGAAGC 
AGTAAGTGCA GATGTATCCT GTGAAATATC GACTGACGTT GCGCTATAGG ATTGGAGAGT 
CATCAGAAGA AGAAAAGTAT GGTCGTTGAT GGCTACTTTG TTCATTGAAT CACTTGATCC 
TGTTTTCCGT CGGTCAATTC TGCAGGTGTG TTTGCATTTC CGGTGCCACG AAGCAGGCAT 
TGACTTCTTT TTAGACCATG TCGAGTATCC TTCTCATCCC TGCTGCCGCC TCATCGCTCG 
TCCTGCGTGA CGGTCTCTTT GTTTGGTTGG ACATGCAGTG GACCACCATC TCCGCATACC 
ACGCTTCACT TCCTATATCC TCCAAGTCCG GCGTTAGAGG CCAACGTGCG CAAGCTTGGG 
AGCAGGAGGA GAAGAATTTG CTGCTGGAAA TCGCAGAAAG GGCGTGCAAG GCCATTGCAT 
CGGCTGAAAA GGAGCGAGTA AAAGAGGGTA AGGATCTGAG AGGCTGGACG AAGCAGTTGG 
AGGCATTCTT GACAACTGTC TTAAGTGGTA AGCTGCTTTT CGGTTATACA AAAAGGACAG 
AACTGATAAT CTCTTAGACG CAGACGGCGA GAAACTGGAG GTTGCATCAA AAATTCTTTA 
CAGTGTATCC CAAATTCCTG TCGATACCAC CACTACTGAA CTTTTGCCGC TCTTTGTGGA 
CAGGCTGTCC TCAACCGGAC CTGTGGCATC GGCGCTCCCG AACATTATCT CCTGCCTCTT 
CGCTGCCGGC TTGAATGTCA AGCCAACTGA TGTTCGTGAG AAAGATGATC TGGCGAAGGC 
GTTGGGCGAG GTGAGATGGC GCGTCGAGCA GGGTGACGCG GGTAATTATT TGAAAGGTTG 
GGTTCGAAGA GAGAGACAGT TGACAGAACG GATGAATTAA TGTGCAAGAG GAGATATCAC 
AGCAATTGAT AGAAATCTTG TC 

 

Protein sequence

MAPKRKWQEG QEDALPTIIR AKPGTKAFAS GKSVKDALAT GSPQAFVSFR QQIVTPYSEL 
PLSINHPTVI ILQHYLDISP ACDEIFRAWQ VGEQTKSEQQ VHAAVELLSE IIQVLTPVPF 
FRSIVIGLVN KVISPSEPYH DHINHLIQSG KRDDVYHGLL LSAVSMSVDP PSTSSMSGRL 
GMKFWNTLVE GGSVRGFGKQ MGMRRRNKEG MVGYGDRDPL DKPDIRHLIL RIILPLFPSP 
SFQPHAKIIL PPLYSNLAAD PPITVLRILT ALWAAISSPS FGLNRRVSLV LFQERSIEAL 
WGQLGRDDVE GKSGKKVGEL VRAFLEGITA TPGKGVCFPD EGWYPRRMDD SKEGDNKVGD 
GGDTWRKGLH NRILGNVVRK VGNKVVDDEG IVGEWMIEVF RACPELVSGY WAHSALSLEP 
RLNVRWMATM SYVGRIISLP IPPLQTFRQP VPAGTDPSFS PFRTAPPQAS TIVESVLPAP 
FTKSHLMKGL QHTEGIVQHM TAVTLSRALA KLGQVQELFS FIESELYPNG QPDNPWARRQ 
RELEMEVRKR LPELAVIVAF AQKSAQLAPA EPDPDSEEDR ALVTKSAMLT ELALRIFSLC 
NRTLPSMASE LKFDVGRLLV SSSSAKQEKK EKQQAREGSV IGDDVQSVKS IGTVGSKGTI 
GMRGGFGQSR GEVEGFEALS QVHVLELLGE VRDWNWSNKA AGSQYTYLYH ILLLHLSTPQ 
SVTYSKTTAL LSHLLLPTLL FEHDPEELPI WLDAMPKKVR EAGPMLFAQQ IQLLAFLDDC 
FRRCLKTPYR YIEDTLALSP SSTPDLQSNS KEMVSPLMMT ILEQLSAKLM GQLISTEAAC 
IIVNYLRRVV LGLVGKQREL SWLLAVLNRL EECVKKAKEA GQERKGLEEC VQVIKGDFDV 
IRGKSEPTDE QDPSLPQLLD HREWSSSSFE YQALFIGRPS TLSSLIFLIE RKDASILLHV 
NFLIHLNILQ PSSTSAIKNQ DSTQAVLILF ARSLENLEGA SKWQDQIKRN VFGDLGSRKL 
LFSEDGHEFR DSLNTLIRHL IFGKSTDEEI AQGFVDGCVE LLDNDKEGKK VDQNLSLLAP 
WVRFLTPSQA SQISQILFRY KNPVLFSHAL LLSDIITSTK SPAFAVEHLG KLGELGVVGA 
VIRLVDDAVK DRKSSEELTS LKIKRETIQL LLNLASNDSI SLLVRLIQAN SSAAEVTSSA 
LQEDEALTND RRLLPVAEAL FVLGLDVGKA SIIGGVALET IASEQDEKVQ GAAIEVLVRL 
AESASNEIVE ILSTVQLSSF NSTFMRFMER LAHICGTKIE LLESICHLIG LGLQYAVRLC 
SNLKDMNEES ATALKSLEQS IEVVDQDRLQ LQVALVEPVI TAVIQDRLEI AEAVGLATLL 
AVRVELKASF LRQQLQAIYA STTYTRCTNS SCPPHIRLHF IRLLHRLFAS STYVSCQPPF 
IEPLILLYRG TTSEVDRRVL HMLQLFEGYR KISLASVMRY WNASGVLGIG GKSLDALTSL 
DPQKTFATCQ AYPLHRKLRG WGKIATDPEE GEELYDPVFV MGLFIASMHE GMRGLDWVEV 
LRSNVLGLTV CGLSSRDREV RSVASYALAK TMSLIETTGF FERAQLIYTL RLLRHALPTS 
TSRLPVLSTL FFAYALRSLA NPSHFFYPLS SRFLLQRSVF DSEDTPLLYG MLYANGEGWK 
RERSWMVRFL KEGVRSEADW RVIRRRKVWS LMATLFIESL DPVFRRSILQ TMSSILLIPA 
AASSLVLRDG LFVWLDMQWT TISAYHASLP ISSKSGVRGQ RAQAWEQEEK NLLLEIAERA 
CKAIASAEKE RVKEGKDLRG WTKQLEAFLT TVLSDADGEK LEVASKILYS VSQIPVDTTT 
TELLPLFVDR LSSTGPVASA LPNIISCLFA AGLNVKPTDV REKDDLAKAL GEVRWRVEQG 
DAGNYLKGWV RRERQLTERM N