Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CND00420 |
Symbol | |
ID | 3257325 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006686 |
Strand | + |
Start bp | 122446 |
End bp | 124337 |
Gene Length | 1892 bp |
Protein Length | 543 aa |
Translation table | |
GC content | 52% |
IMG OID | 638255979 |
Product | expressed protein |
Protein accession | XP_570383 |
Protein GI | 58266454 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.230058 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GCACAATGTC GGTCCCTTCA TACATCGCCT TGAGCCTCCC GCCGAGTGCC ATCCACATCC CCTCACCTTC CGCTACCAAC ATCTCCGCTT CTGCAACCTC TAGCAATGCC AAACCTCACC TTCCATTTCC GCCCTCGTCG GCACCTCGAG GAAAGCCAAC AGGCTCAACG CTAGGGATGT CGCTCCCGTC CTTATCCACC AACGTGTCCG ACATGCTGCT ATCATCTTTG TTGCCTCCCA ACCTGCCAAA ACTGCCGTCT GGAGGTGCAA GAGGTATCGA CGGAGGTGGA CCGAGACAGC TCACGACGCA GAGAGAAGGG CTGACTGTAC CGTTACTGAG CAACAACTTT CGGCGTTTCG TGACAAGGGT GGGTCTGATC AGTCGCATAT AGAGCTATAC TCAATCCTAT TATAGGTTGG ACCGGTATTC TGGCTTCAGG ACCGGATAGA AGAGGTGCTT TACTGGAGGA AACCGGTGTG GACATGGGGA TGGATGTTGA CATGGGTGTT CATCTGTACG TCTTGACAGT CTATGGCCAT AGCTGACATT AAGCAGGCTT CCAACCTCGG GTACTGCTTT TATTGCCTTC TCTCGCTCTC ATCGTCCTCC TTTTACACAT CCACGAACGC ACCCATCCAG TACCATCTCT CATCGGGATA ATATCACCAC CACCTCTAGC TACTGCTCGG GTGCACCCTG AGTCCAGCAC TGGCGATTCG AGTCCGGATA GGTCCTATAC GGCGACTACT ACAAGAGACG AATCGGGAGA GACGGTGGGC GTGCCGGTTG TGCCACCTAA AGAGGCCGAG AGCGGAGTGG ATTATTTCAT GAACATTCAG GCTATCCAAA ATCTTATGGG TTTGGTGTAA GTCCCTCGAG GCAACAATGC GAAATACTGC TGACAGGCTC ATAGGTCTGA TGCATATGAC TATCTCGCTC CCATATTGAG CAACCTGCAA TCCCCCAACA CTTCGTCCCC AACATGCTTC CCGCTCACCC ATACTCACAT CATCCTACTT CTCCTCCCTC CCACATTATT CCTCCCTCTC GTTCCATCTT GGCTTATCCC ATACGTCATC CTCCCACTCG GTCTCCTTCC GCCTCTCGGC TTCCATCCCA ACTTAACCCC TTGGCTCCTC TCCCTCCCTC GACATCCGTC AATCCGCAAA ACTAAATCAG TGCTCGAAAA ATGGATCCTC ACCGACAAGC TCCCCGACAA ATACAGCGGC CACAAGATCT CACAAGTATA TGTATGGGAA AACGAGAGAC TCGATCCGAA ACTGGCTTCA TCCTCCTCAT CATTTACCGG CCCGATCCCA ACGACGAGCT GGTCTGCTCG GTTCCTCCGA CAAGGGGACC GACGAGCATG GATCAAGATC TCTGATGTGG CAGAGGGTGA GGAGTGTCTG TGGAAAAGCG TGGATGACAC AGGTCTGCCT AACGGGGATG ATGAGAGTGA AGTCGAAGCA AAAGTGTTGG CGCTCAAAGA TGGGTGGGAG TGGTTACCAG AAGATTGGAA AGTGGACGTC AATGGTTTAT GGAGTGAGAA TGGTGTTGAC GAGGGTGAGC CACTCTACAA TTATATTTTC CATGTCCCAA TCCTATCGCT AATGATGCGC GATATAGAGG GCTGGCTATA CACTGATGAC TCTTGGCAAA ATCCTTCCCC AACACCTTAC ACGGAGCCTG ACCTGCCAGC GAACTCTGCG TCTATCCCAG GACAATTGGT GCAATCGGTG CAAACAGGGA AGGAGAAAGA TATGCCCGGA CTGGGTTTGA GGAGGGTCAC CAGACGGAGG AGATGGTGGA AGAGGGTTTA TAAAGTGGAT AGCTAAGTTG TATATTCTCA TGGACGATTG CTTTGCTTTT ATGATGTATC TTGATTTGCG TC
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Protein sequence | MSVPSYIALS LPPSAIHIPS PSATNISASA TSSNAKPHLP FPPSSAPRGK PTGSTLGMSL PSLSTNVSDM LLSSLLPPNL PKLPSGGARG IDGGGPRQLT TQREGLTVPL LSNNFRRFVT RVGPVFWLQD RIEEVLYWRK PVWTWGWMLT WVFICFQPRV LLLLPSLALI VLLLHIHERT HPVPSLIGII SPPPLATARV HPESSTGDSS PDRSYTATTT RDESGETVGV PVVPPKEAES GVDYFMNIQA IQNLMGLVSD AYDYLAPILS NLQSPNTSSP TCFPLTHTHI ILLLLPPTLF LPLVPSWLIP YVILPLGLLP PLGFHPNLTP WLLSLPRHPS IRKTKSVLEK WILTDKLPDK YSGHKISQVY VWENERLDPK LASSSSSFTG PIPTTSWSAR FLRQGDRRAW IKISDVAEGE ECLWKSVDDT GLPNGDDESE VEAKVLALKD GWEWLPEDWK VDVNGLWSEN GVDEEGWLYT DDSWQNPSPT PYTEPDLPAN SASIPGQLVQ SVQTGKEKDM PGLGLRRVTR RRRWWKRVYK VDS
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