Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CND00400 |
Symbol | |
ID | 3257185 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006686 |
Strand | + |
Start bp | 117940 |
End bp | 120397 |
Gene Length | 2458 bp |
Protein Length | 694 aa |
Translation table | |
GC content | 49% |
IMG OID | 638255977 |
Product | hypothetical protein |
Protein accession | XP_570325 |
Protein GI | 58266338 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.679125 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAAATC AAGATGAAGA AGGTTGGGTT TTGGCCGGAT GGGGTAAAGG TTGGCTCGGT GGGTGTCTAG GGTGGATTGC CGTGGGTGCA TTCATTTTTG AATGGATCAC AACTAATTGT GTGGCAGTCA ACGTCGTCCC CTATACCTTC GATCCCTCCT TATATCTCTC TCCTCAGCAC TCTTGTTCTT ACATCTTCTC ATTTCCCCTC GTTCGAGCGT CAAAATGTGC ATCCTATCAT GGGCAAGCTG TCCGTCTCTC TCGGAAGGCT TTTGCAGAGA TGTTTGGCTG AACCGCAACC AGATTGGGAC GTTATGGTAA GTCATCGAGT CAAGATTATA GCATCATCTC GCTAATCAAA GTATAGCTTG ATATCCTCGA CTCTTATCAA TCTCTCCTTC TTCATTCCCC TGCCAACTTC CGGCCATCCA CCGCAACTCT TAAACCCATT CTTTTGGCCC TCCTTCTTAT GATCCCAACT CCTACATCAC CAAACCCTTC GATACCTGCT GAGATCCGCA CTGCGAGTGC CAAGCTCCTG GCTTGCTGCC ATGTTACCGC CGGTAAAGCT CAAAGCCCCG CGTCTTGGAC CGCCGATGTG AAGGATCTTT TGGGTGGAAT CGGCAAGGCA GCAGCTGGGA TCACAGCTGA TGCTTGGGAG GCCGATCCAG TTGCAGTCAA CCCTCCACCA TCTCCTAACA CTCCAGAGCT TCCTATTGAT CCTTTACAGC GAGTCCCTGT CGCTTTGGAT TGGCTTGAGG GTTTGACCGA GGCGGTTTTG GAGATGCTGA GGTTCCCCAC CAATCGACCT GTTCATGTGC CTGTTGCGGG AATTGTGAGC GCTGGATTGA GGTTCTTAAG CTTGACTCTA GATACTCCTA CTGTCTCCTA CATTTCCCCG CAGCATCATG CTCTTCTTGT TGCATCCCTG CCAAGAATAT GGTCTATCGG GATGCAGCTT TTGGGTGGCA TTGCTTTGGC GTAAGCATTT TTATAGTCAA AAGTGGTATA TGCTGACTTG ATGATCAGTG TTGAAGACCA CCTCTTCCCT CATCTTTCAA ACATCCTCGA CCACTCTGTC TGGCTTCTCG AGCGTATTCC AAGCAGCATG TCGTACGTAG ATATAGCATA ACCACGTATA CTCTTCACTA ACAAACGCGT TCAGAGAATG CCGAACCCAG CTACTCAAAT TCCACACCCT CCTCTTAACC CTCTTTCCCC CATCCCTGGT CCCCACCGAT TACCCAACAC GTCTCTTACG TTTCTGCATC TCCACTTTTT CACCTTTGCT AGAGCGCAAG GACGTCTCTG CTTCGGCTGC CGCAAGTCAG AACGAAAGCG GTGGTGGTAA ACGGGGAAAG AAGAGGGCAA GGAATGCTGA AGATGGGTTA GTGGGTGATT TGGAAGGAAA GGGGAGGCAG AGCTTGGGTG CAGGGGAAGT CAAGGTTATC CTGCAAGCTC TGAAGCGTGA GTCCTATTTT TTTGTATATA TATAGTCGCT GATGGAATAC AGTTTCACCT ATATTGCATA CTACCCCTCT CATCTCCCCT TCCTTGTTGA CTCTTTCTAT TCGACTTCAT CTCTCTCTCT ACTTGGCCCT TCCCTCATTA TTTTCATCCG TTTTCCCTTC GATCAACGCC AAATCGGAGA CCTTGGAAGC TGTGCAGAAG GTATTGGAGA GCGTGTTGAG CGTCGGCGAA GGATGGAGCA AGGGATATGA AAGCGTCATC ATTTCCGTTC TTGTAAGCAT TGCCGCATTG AATGATTTTT GAACCAACTG ATAATTGAAA ATTTGAAACT CTAGAGCCAC AAATCTCAAT CGTCAATCGA TAAGATTATT CACCCCAAAC TCCCTCCCAT GCTTCGGGCT CAACCTGCTT TGCGAGAATT ACATTTCTTC ACCAAGGAAG GCGACGAAGA GAAGAAGGAA AGGAAATTAG CAAGATTAGG GATTGATGAC GAGGATATTG AGGTTGAGAA GGAAGAGGAA GAAGAAGCCG TGCGACCTCC TCCTACGCAG GTTACTTCCA CGACAGGCTT TGCTTCCTTT GCCCTTCCAG CAACTAGAGA AGTACCCTCA TCTATGCCTT TAGCCGCTTC GGCTCCTCTG GTGCCTATCG CTGCCCCCGT TGCCGCTCCA TCAGTCGCAC CTGCCCCTTC CGCAGCTTTC GTTCTCGATT CCACGTCCGC ACCTGCAACA GCAACAGCAC CAGTCGTCGC TCCTATCCCA TCCCAACCCG AACAAACTAC CTCTACAATC CCCTCGAGCT CCTTCATCTC CTTCACCTCC AACTTGGCTT CGGCGACCAC CAATTCCAAA ACAAATGAAA CTGTCGTAAA GCAGACAACC CATGTGGAGA AGATGGAGGT GGATGACGAA GATGAGGGAA TCCCTGAATT GGATAGTGGA AGTGATGATG ACCTTTTGGA GGATGACGAT GGGGAGGAGG ATGATTAG
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Protein sequence | MINQDEEGWV LAGWGKGWLG GCLGWIASTS SPIPSIPPYI SLLSTLVLTS SHFPSFERQN VHPIMGKLSV SLGRLLQRCL AEPQPDWDVM LDILDSYQSL LLHSPANFRP STATLKPILL ALLLMIPTPT SPNPSIPAEI RTASAKLLAC CHVTAGKAQS PASWTADVKD LLGGIGKAAA GITADAWEAD PVAVNPPPSP NTPELPIDPL QRVPVALDWL EGLTEAVLEM LRFPTNRPVH VPVAGIHHAL LVASLPRIWS IGMQLLGGIA LAVEDHLFPH LSNILDHSVW LLERIPSSMS ECRTQLLKFH TLLLTLFPPS LVPTDYPTRL LRFCISTFSP LLERKDVSAS AAASQNESGG GKRGKKRARN AEDGLVGDLE GKGRQSLGAG EVKVILQALK LSPILHTTPL ISPSLLTLSI RLHLSLYLAL PSLFSSVFPS INAKSETLEA VQKVLESVLS VGEGWSKGYE SVIISVLSHK SQSSIDKIIH PKLPPMLRAQ PALRELHFFT KEGDEEKKER KLARLGIDDE DIEVEKEEEE EAVRPPPTQV TSTTGFASFA LPATREVPSS MPLAASAPLV PIAAPVAAPS VAPAPSAAFV LDSTSAPATA TAPVVAPIPS QPEQTTSTIP SSSFISFTSN LASATTNSKT NETVVKQTTH VEKMEVDDED EGIPELDSGS DDDLLEDDDG EEDD
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