| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CND00390 |
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| Symbol | |
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| ID | 3257030 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006686 |
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| Strand | + |
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| Start bp | 114802 |
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| End bp | 117109 |
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| Gene Length | 2308 bp |
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| Protein Length | 654 aa |
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| Translation table | |
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| GC content | 49% |
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| IMG OID | 638255976 |
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| Product | multidrug efflux pump, putative |
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| Protein accession | XP_570327 |
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| Protein GI | 58266342 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGACTC ATCACACTAA CCAGATACAC GATCATTCCC CTTCTTCTCC TTCCAATCAA
CCCGTGCTGG AAGAAGGTGA GGATGAATAT CGTCCACTTC CACATGCCTG GTCTGGTGCC
ACGCTCTATG AGCCATACAC ATTGTCTCGC GACAAGCTCA AGAATGTCAA CAGTGTCGAG
TTCTGTTCCC AGGTTAATGA GCGCGAGTCT GAGGAAAGTG GCGAAGTGCA AGGTAATGTT
GGTCTGACTC GCGAGGTCCC CAATTCTGTT TTCGTTGAGC CACAAGAGGA CTACATCCCT
TACTCATCTG GCAAGGGTCC TAACAAGAGG TCAGATCTAC CTCACCTGTA CTATGATAGC
CCTTGGCCTG AGAGTGCGAA TGACAGTAGT CCAGGTCCTG CTCATAATGC AAGGGATGGT
GATCAAAATG AGAAACTGGG TGGTCTCAAT GCCTCGACAA TCCCTAACTT TTCTTCTTCT
GGCAATGCGT CTTTACCCCC CCTCACGTCA AGCCAAAGTT ATCTCCAATC TCGCTCTTCA
TTCTTCAGAT TGGTCTTCCT TCTCACTACT TGTGCTACTC AGCTCATCGT CCAAGCACAG
CTGGGTATGG TCATGATGCC GCTTCATGCG ACCGCCGAAT GGTTAGGGAA GGCTAACAAT
AGCGGGGAGA TGAGCTGGAT GGCTGCTAGT TATGGGTACG TCCTTCCTTC CATTCTTCAT
CTGATTTTTT GCTGACGAGG TATACGAGTT TAACGGTGGG AATGTTTCTG GTCATGGCCG
GCCGTCTGGG AGACATCTAT GGCCCTCGAC TGATATGGGC TGTGGGATGT ACCTTCATGA
TTGTCTGCAA TATCGGAAGC GGGTTCGCGA CAACTGCAAT AGGATTCGAC ATTGCTCGCG
CAGTGGCAGG AATAGGCTCT GCTCTGGCTT GTAAGTCCTG TTACTAACTT CCTAGCTTAG
GTCGGTGCTT ACCATATGAA TAGTACCGAA CGCTCTCGCC ATTCTAGGTC GCACCTATCC
ACCAGGGCAA ACGCGCAATA TGGTATTCTC TATCCTCGGT GCTCTTGCGC CAGTTGGGTT
CTGGATTGGC GGCGTGTTAG GTGGACTTTT TGCACAGTTT GCGCATATCA AATGGGTCTG
GTGGTTCACG GCTATACTCA CTGCCTTGTT CCTTGGTGTC GGTTTCTATG TCTTACCACC
TGACTCTCTC TGTCCATCCG TGTCCAAACC CCACTTTGAC ACCGTCGGTG CTATTCTCCT
CTCTCTCACA TTAGGTCTCT TCAATTTCGT CTGGAACCAA GCACCGCTCG TCTCATGGTC
TGCGGCCTAC ATCCCTGCCA TGCTTGGGGT TTCTTTGATC TTTGGGGGTA TCTTTGTCTG
GTGGGAAAGA AGAGTTGGCA AAGGAGCGCT GATCCCGATG GAAGTGTTGA GCAAGCAAAG
TTTATTGGTG TATTTGAGTC TGTGGCTTGG GTGGATGAGC TACGGTACTT TCTTGCTTTA
TACCATGTTC TTGTGAGTGA TTTCGAAATA AACACTGAAG GTGGCTGAAA TCAAGGATGT
GTTAGTATCT ATGGTATCAG AGGATATACC GAGCCTCTTA CTATGGCATT TCAACTTGCG
CCCCTCTTGC CAGCAGGTAA GTCATTTCCT CCTCCTATTG AATTACTCAG ACGTTTACCG
TAAGCTAGGA GTAATTGCCG CCCTCATCGT CCCTCTTCTC ATCCGCCATC TTCCAAACCA
TTTCATCTTT CTTCTCTCAA TGTTTGCATT CATTGCGTGC AATATCATAG CAGCCACGGC
TTCTTCAAGT ACTGCGAACG GGGAATATTG GAAGGGTACT TTCTGGAGTT TGATCATAGG
TACTTTCGGA CCAGGTATGT TCATTCTGAT ACTTTGCTTT GTTTCTTAGA CGAAATCTGA
AGCTAAGCGC CGTTTCGTTT CACTATAGAC TTGAGCTTCA GCACGGGGCA ATTGATCGTC
AGTAACTCGG TAAGCCATGA GTTTCAAGGC ATAGCGGCGG GCGTGGTGAG CATGATCACC
AATTATTCGT GCGTTGCCTT CTTCTCGCCT TGCACCTTTG GAAAAGCATA ACTGATCGTC
GGATAGTATT GCCATTGGGC TAGGTTTGAC GGGGACTCTT GAATACTATA TTCGAGGCTC
CGGAGACACG ATAGACGACG TGCTCAGAGG TTATCGAGCT TCCTTCTGGT TCGCTACCGG
GTTGGCCGGT ATTGCGGGGA TAGTGGTAGC ATTGTTTGTG AGGGTGCCAA AGCAAACTGG
CGGATTGCAA GTTATCCACC CTGTGTGA
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| Protein sequence | MSTHHTNQIH DHSPSSPSNQ PVLEEGEDEY RPLPHAWSGA TLYEPYTLSR DKLKNVNSVE
FCSQVNERES EESGEVQGNV GLTREVPNSV FVEPQEDYIP YSSGKGPNKR SDLPHLYYDS
PWPESANDSS PGPAHNARDG DQNEKLGGLN ASTIPNFSSS GNASLPPLTS SQSYLQSRSS
FFRLVFLLTT CATQLIVQAQ LGMVMMPLHA TAEWLGKANN SGEMSWMAAS YGLTVGMFLV
MAGRLGDIYG PRLIWAVGCT FMIVCNIGSG FATTAIGFDI ARAVAGIGSA LALPNALAIL
GRTYPPGQTR NMVFSILGAL APVGFWIGGV LGGLFAQFAH IKWVWWFTAI LTALFLGVGF
YVLPPDSLCP SVSKPHFDTV GAILLSLTLG LFNFVWNQAP LVSWSAAYIP AMLGVSLIFG
GIFVWWERRV GKGALIPMEV LSKQSLLVYL SLWLGWMSYG TFLLYTMFFI YGIRGYTEPL
TMAFQLAPLL PAGVIAALIV PLLIRHLPNH FIFLLSMFAF IACNIIAATA SSSTANGEYW
KGTFWSLIIG TFGPDLSFST GQLIVSNSVS HEFQGIAAGV VSMITNYSIA IGLGLTGTLE
YYIRGSGDTI DDVLRGYRAS FWFATGLAGI AGIVVALFVR VPKQTGGLQV IHPV
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