Gene CND00290 details

Gene Information

• Locus tag: CND00290
• ID: 3257297
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006686
• Strand: +
• Start bp: 85410
• End bp: 88926
• Gene Length: 3517 bp
• Protein Length: 919 aa
• GC content: 50%
• IMG OID: 638255966
• Product: expressed protein
• Protein accession: XP_570497
• Protein GI: 58266682

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.73536
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CTTTCTTTTC GACTCTATAA TGCTCTCGTC GTACCCGAGT TGCGACGCCA AATCAATCTC 
TCTGGTCACC TTATAATAGA AAAACGATCA AAACTCTGGC GGAAACCTTC GCCGTACGGT 
CTTTACTCTA TCGGCCTGGT TGTTTGCTCC GTTTGTTAGT CAGTGTTCGT TCGCCATAGT 
TGCTCAAGTA TCGGAAGTGA GTCATCAGCC GGCGCAGAAA CATGGAAAGT ACTGACTATT 
TGGGCAAAAG ACATTTATTT GGCTGCTCTA TTCTTCACTT GTGCTTTCGC GACCTTTGTT 
TGTGTCTTAT AAACTTTGCT CCAATAGTAG ATCAGCAAGT CTCTTGGACA AATTGAGGTG 
TTTTTTGTTT GGATATTGCA AGTGAGTCAA AAGTTAGAGT CGAATATAGA TACGGCTGAC 
CATTTGATCA GAAACTGACT ACTGTTCCAT TTCACATTCT TCATTTTGCT TCTTTCGCCT 
CCAACCTATA GACTTTTTTT CAATCGTAAG CGAGCAACCC TATTCCTAGA CAGAAAAACG 
GGCTGACGAG TACTGTTTAA ATGAAGCGCA AACATGTCTG CTATGTCTTT TGACCCTCTT 
CCTTCTTCGA CGTCTTCCAA CTCTCTCCGT CGTTTTTCGC TCCCGACGAC CCTTTTTACC 
CCCATTCCGG CCACTCTTTT CGAGCCTTCC CGGCAGCCTC GTTCCTCGGG AATGCCTCAG 
TCTGTGCAAC TCTTCCAAGA AAAACATGCC ACCGAGTTCG CCCATTTGTA TGAATATGAT 
GATGAGGCTG AGCGAGAGCG CCGCTTGCAA CAAGAGCAAC AGGTCCTGGA AGAGGCGAGA 
CGTGTGGGAA GATTGATGAG GGAGAGCTTG AAAGCCAAAA CCAAGGAACA GCTCGAAGTC 
AGAGTTGACA CCCCCTTCCA ACAATCCAAT AAGAAAGGCA GACGTCCGTT GAGTTTATTA 
TCGGATAGAC AGCTCGAATT CCGGTCACCA GAATTGGTCC GGGTCAGCGA ATGCGTCACT 
CCTCGTCCCG TCGAACGCAC AAGGCTCATA CCTCCATTGA AAGATGATAT GGAGCATTTG 
ACACCCGATT TGTCAACACC CATACTATCC GATACGTACT CTCCCGATCC TACCATCGTT 
ACTCCTGATC AGCGAGGCTT GGGTCTTGAA TTCCAACAAT CGTCCACCCG TGAATCCATC 
CATGAAGAGC CGTCCTCCTC TTTAGCAAAC ACCTCTTTTC GGCACTCCAC CTATTCTTGG 
GCGAGTTCTT TTTCCGGAGA AACGGAAGAG CTGCGAGTGG CTGCGCATTA TGTGCCCCCA 
CAGACCCCGC AGGAGGAAGA ACAGGACAAG GATCACGGGG AGGAAGTTAT TGACACCCCT 
GAAAAGACCA AGCGGCGGAG GAAGCGGATA ATAGCCATCG CACACACTGT GCGACAGCTT 
GAAGGTATCG GCTCTAGAGA GGTTGAGGAT CCTACGCTCT ATCAGAAGTT GGCCAAGGCA 
TGGAATGAAA GACCTGGATT TATGCCGCAA GAACCGGTGT GGGCACCCGA CGAGCAGTCA 
GCGGAAGAGC GAGCCCCAAA AGTTTCCACA AACTCTGGCG CTTGGCTCGC GCCTTCGCTC 
GCTAACGACC TCACTCAAAT CCAATCCCAC TCATCCTCGA ATCCTTCTAC TCTTAACGAC 
TCGCAAATAT CTAGTCCATT CCGGTATTCT TTTGCCTCGA GTGCCCATGA TCTCGTGGAT 
GATGGCGGAA TCGAGCGAGG TGCGCAGATC TTGAGTGAAA AGGCTTGGTT AAAGACACCG 
TTGTACGGCC ATGACGCATT TTTTGGCGCG CACTCTCCTT CAAACCCTTA CCCCAATTCA 
TCTTTTCAAC CCAAGCCCAG AGCTAGGAAC AGCGGAAACT CGTTCGAGGG CGCAGGAAGC 
ATACGGAGCC ACGATGAGAA GAGTGAAGAA GAGGTCAAGA TTGAAAGGGC AGAGCCTAAA 
AGGACGCTGA AAAGAATCCA AACCGACATC TCCAAATTAC GAGCCGAAGG CACATTTGTT 
CCCCTCAAGC CTGAAGCAGA GGCCGGTCCG TCGGTGCCGC CTATCTTTGG CCTCGGCTTC 
ATCGGTAATT ACATGGTGTC TGTGGATAAC GGGCGTCGTC CTTTGGAGAT CAAGCCAGAG 
GAATCGGGTT TTCAGCAAGG GGAAGATGGG GTGGAGATCA GGGAGGCGAA AAAAGGGTGC 
AAACAACAAG GCTCGATTCA TTCACTCAGC GGGATTATTC CTCAGAGCAC ACGTCCGGTC 
GAAGACGACT CTATGGAAAC AATCGACCTG ACTCTCGCTG CATCGCGCCC AGCGAGCTTT 
TACACCACCT CCGACGGTCG ACGACAACAG CGCCAGCAGC TCACGCCCGG GAAAACAGAC 
TATCCGTTCT CGAACCACTC CCAACAGCCG GATTGCTGGA CCCCCTCGAC TATCTCCTTA 
CCTCAACACA TCGAATACAC TCTGGGTCCT CCGATCGATC TGGGAGCCCC AGTTTCTATT 
CCGGATCGAC TGACAATGGG GATATGGCAA AAAGAGGAGG CGGAAGGGCC GGAGACGGAG 
GAGGGCGAGT GGCTCGAGGA TTTGGATTCT TATCGTTCCT CGGCGATTTG CTCATCCCCA 
TCCATCTCCC ATCCGAGTCC CCGCCAATCT CGCCTCCAAG TACGCCCAAA GTCTATCCCG 
CCGACTACCC CGGTGAAGGA GCAAAAACAC CCCATCTTCC CCGACATGCT GAATACACCT 
GCGAGAAGAA AGGAGAGGAG AAATGGAGAA GAGAGCGAGG ACGAGCATCG TTCGTCAGCG 
AAGAGGAGAC GCCAAAGCTA CGACCGCTTT TATTACCGCG GTATGTCAGC GGAGGGTGGG 
GAGGATATCG CGGCTGTGGG GGAGGATACG GGAAGCGTTG CAGCGGGAAT AACGGACAGG 
AGCGAAGCCA TGAGAGCTGA AGTGGAGAAG GGACATACAC AATCAGAAGC CGTCGCGCCA 
GTGACCCAGC CACACCCGAC CACTAACTCA GACCTCGAGA AGGGCACCCT GTCACCTTCA 
TCTCTACCTC GTTCGCGCAC TCCTCTTGTG TTCTTTATCC TTGGCTTCTT TCTCCCCCTT 
CTCTGGCTTG TTGGTGGCTG GCTTCTACCC CATTCTTCCA CGCAAACTCC TGAAACGGAA 
ACCATCCCTC AAACCATTAC ACATTACTTG CCCCAATGGC TTTATCACTC AAATTACACT 
GTTCTTGCTT GCCGCATAGC ATCTCTAGCA TCCTTGTCAT TCCTTTTGAT AGCAGGTATA 
ACTCTAGCAA TCGTACTACC GCTTACTCTT TAGCCCCTAC ACGTGTCTGT TTTTGGTTTT 
CTTATTGAAG TAGCATTTTT TTTCCCCTTT CTTGGACAAT TCATAAAAGT GCTTTTGGCA 
TTAGCAGAAT TGGAATATTT ATTACAAGGT CGTATTTTCG AACATAAAAG CGTCCTTTTT 
GATAGTAGAT TCTACGTGCA CCCGTGCGAT GTATGCA 

 

Protein sequence

MSAMSFDPLP SSTSSNSLRR FSLPTTLFTP IPATLFEPSR QPRSSGMPQS VQLFQEKHAT 
EFAHLYEYDD EAERERRLQQ EQQVLEEARR VGRLMRESLK AKTKEQLEVR VDTPFQQSNK 
KGRRPLSLLS DRQLEFRSPE LVRVSECVTP RPVERTRLIP PLKDDMEHLT PDLSTPILSD 
TYSPDPTIVT PDQRGLGLEF QQSSTRESIH EEPSSSLANT SFRHSTYSWA SSFSGETEEL 
RVAAHYVPPQ TPQEEEQDKD HGEEVIDTPE KTKRRRKRII AIAHTVRQLE GIGSREVEDP 
TLYQKLAKAW NERPGFMPQE PVWAPDEQSA EERAPKVSTN SGAWLAPSLA NDLTQIQSHS 
SSNPSTLNDS QISSPFRYSF ASSAHDLVDD GGIERGAQIL SEKAWLKTPL YGHDAFFGAH 
SPSNPYPNSS FQPKPRARNS GNSFEGAGSI RSHDEKSEEE VKIERAEPKR TLKRIQTDIS 
KLRAEGTFVP LKPEAEAGPS VPPIFGLGFI GNYMVSVDNG RRPLEIKPEE SGFQQGEDGV 
EIREAKKGCK QQGSIHSLSG IIPQSTRPVE DDSMETIDLT LAASRPASFY TTSDGRRQQR 
QQLTPGKTDY PFSNHSQQPD CWTPSTISLP QHIEYTLGPP IDLGAPVSIP DRLTMGIWQK 
EEAEGPETEE GEWLEDLDSY RSSAICSSPS ISHPSPRQSR LQVRPKSIPP TTPVKEQKHP 
IFPDMLNTPA RRKERRNGEE SEDEHRSSAK RRRQSYDRFY YRGMSAEGGE DIAAVGEDTG 
SVAAGITDRS EAMRAEVEKG HTQSEAVAPV TQPHPTTNSD LEKGTLSPSS LPRSRTPLVF 
FILGFFLPLL WLVGGWLLPH SSTQTPETET IPQTITHYLP QWLYHSNYTV LACRIASLAS 
LSFLLIAGIT LAIVLPLTL