| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CND00090 |
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| Symbol | |
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| ID | 3257245 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006686 |
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| Strand | + |
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| Start bp | 23846 |
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| End bp | 29354 |
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| Gene Length | 5509 bp |
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| Protein Length | 1558 aa |
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| Translation table | |
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| GC content | 49% |
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| IMG OID | 638255946 |
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| Product | ATP-binding cassette (ABC) transporter, putative |
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| Protein accession | XP_570345 |
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| Protein GI | 58266378 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
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| TIGRFAM ID | [TIGR00956] Pleiotropic Drug Resistance (PDR) Family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.120947 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCATTTT CAGGCGTTGG TCAAGGTATA GGTACCTACG ACCGTACCGA ACAAACATCC
GGCGCTTCAC TAGGCCGCGT CACATCCAGA GCCCATTTCA CAGATGTTCA CCCTAACGAC
AACCTTCCAG CTCAAACTGG AGAACATTGT GCTCGCGACG TTGGCCATCT TGCTCGGCAA
CTCACTCGAC AATCTGTAGC GGCTGCCGAT GACTCGGCCG CTATATTTTC GTACCAAGAA
GGCTCGGATC TTGACCCTTT TTCCGAAAAG TTCAATGCTA AGAAATGGAC AAAATTGATG
TTTGAGGCCT CTCAGAGTTC TGGTCCGGGG AGAAAAGCCG GCTTGTCATT CAGGAATCTT
GATGTTCATG GTTTTGGATC CGATGCTGGT AAGTCATATC CATCTATTCA TGCGATGGCA
AGACACGATA AGACCAGCAC TAAATGTCTG CAGACTACCA AAAGACCGTC GGTAACCTCC
CACTCGTCGG TATCGGCGCT CTCAGAGATT TGATCGGTAA CCGCAAACGC AAGGTCCAAA
TCCTAAACAG TATGGATGGT GTACTAGAAG CGGGTGAAAT GCTCGTCGTC CTTGGTCCTC
CCGGAAGTGG TTGTACGACA ATGCTCAAGA CTATTGCTGG AGAGATGAAC GGTATCTACT
TGGATGAGTC TTCCTCACTT AACTATAGAG GTCAGTTCTC TTTGTCTTAC TTAAGATACC
GAATTGACTT CGACCAGGTA TCACTCCGAA GCAAATTTAC GGTCAATTCC GAGGCGAAGC
TATCTACACT GCTGAGGTCG ACGTTCATTT CCCCAATCTT ACTGTCGGTC AAACATTATC
TTTCGCTGCT GAAGCTCGAG CCCCTCGAAA GCCTCCTGGA GGCATCTCGA AGAAGGAATA
CGCCAAGCAC ATGCGAGATG TCGTCATGTC TGTCTTTGGC ATTTCCCACA CTCTGAACAC
TATCGTCGGC AACGACTTCA TTCGTGGCGT CAGTGGTAGG TACTTGTCTG TTCCACATTT
TTTACAAAGC TGACAGTCGC TAGGTGGCGA GCGAAAACGA GTAACTATTG CCGAGGCCTC
CCTTGCCGGC GCTCCCCTCC AATGTTGGGA CAACTCCACC CGTGGTCTTG ACTCTGCCAA
CGCCATCGAA TTCTGCAAAA ACCTCCGTCT GAACTCCGAT TACATCGGCA TCTCCTCAGC
CGTCGCTATC TACCAAGCTC CCCAAGCCGC TTACGACTGT TTCGACAAGG TCTCCGTCCT
TTATGAAGGC GAGCAGATTT TTTTCGGCAA GGCCACCGAA GCGAAGCAGT TCTTTGTCGA
TATGGGATTT CACTGCCCTT CTCAGCAGAC CGTCCCCGAC TTTCTCACAT CACTCACCAG
TGCAAGCGAA CGTACACCAC GAGAAGGGTT CGAAGGCAAG ATACCCACCA CCCCGCAAGA
GTTTGCCACG CGATGGAAAC AGAGCGACAA ATATCAGGAG CTTTTGGCAC AGATTGCCGA
GTTTGAGAAC AAGTACCCCG TTCATGGCGA GAAGTATCAA GAGTTTTTGC AATCAAGACG
GGCTCAGCAG TCCAAGCGTC TCCGACCCAA ATCTCCTTAC ACCCTTTCGT ACGGCGGCCA
AGTCGAGCTT TGCCTTCGAA GAGGTTTCGA CCGTCTTCGT GCGGATCCCA GTCTGACTCT
TACTCAACTG TTTGGTAATT TTATCATGGC TCTTATTATC GGTTCAGTCT TCTATAACCT
TCGTAAGCCG TCTTTTTAAA GTGGGGTAGG TCTCAAGTCT GACAGTGAGC AGCTGCGACT
ACGAGCAGTT TCTACTCACG AGGTGCTTTG CTATTTTTTG CTATTTTGAT GAGCGCTTTC
GGATCTGCTT TGGAAGTAGG CCAATCCACT CTTCACTACA AGTGAGCATC GGCTGACCTA
TTGCAGATCC TTATCCTCTA CGCCCAACGA GGCATCGTCG AGAAGCACTC CCGTTACGCC
TTCTACCACC CTTCCGCCGA AGCCGTCGCC TCTGCTCTTA CCGATATTCC TTACAAGGTC
GTCAACTGTA TCATCTTCAG CTTGACCTTG TACTTCATGA CCAATCTCCG ACGTGAACCT
GGTGAGTAAT GCCATTCATC GCCGAAAAGC CCACCACTAA CAACCAAACA GGGCCGTTCT
TCTTCTTCAT GCTCATCAGT TTCACTCTTA CGATGGTCAT GTCCATGCTC TTCCGATCGA
TCGCCTCCCT CAGTCGATCT CTCACCCAAG CTCTTGCCCC TGCTGCTCTC CTCATCCTTG
CCCTCGTCAT GTACACTGGT TTTGCCGTTA ACGTGGCCAA CATGCGCGGC TGGGCTCGAT
GGATGAACTG GCTCGACCCT ATTGCTTACG GCTTCGAATC TCTCATGATC AATGAGTTCC
ATGGCAGGGA GTATGAATGC GCGGCGTTTA TCCCGATGGG TCCCGGATAC GAGGGTGCAA
CTGGTCAACA GCTCGTTTGT TCCACGGCGG GTGCTGTTGC GGGTTCTTCT GTGGTTAATG
GTGATGACTA CATCAACTTA TCATACGAAT ATTACCACGC GCACAAGTGG AGGAACTTTG
GTATCTTGAT CGGGTTTTTC CTTTTTTTTT CCGCTATTTA CATATCTGCT ACTGGTAAGT
GTATTTCCAT CGTTCCATTT AGCGGCTTCC GCTAATTCCT CTTCAGAATT TATTACCGCC
AAGAAATCGA AAGGTGAAAT CCTCGTCTTC CCTCGAGGCA AGATCCCGCG CGCCCTCCTT
GCTCAGTCCA CTCACTCCCA CGGCTCATCC GACGACGTCG AAGGCGGCAA GTTTGCCGGT
GGTTCTAAAA TGAAGAAAGA AATCACCGGT GCTGACCGAG CTGACGCTGG GATCATCCAG
AGGCAGACTG CTATCTTCTC TTGGAAAGAT GTGGTTTATG ATATCAAGAT CAAGAAGGAG
CCAAGAAGGA TTTTGGACCA CGTGGATGGA TGGGTCAAAC CCGGTACTTT AACTGCTCTT
ATGGTAAGCT CTTTTATCCC TCTCGGAGCG ATGTTGAGGT AACACTTACG GATGATTAGG
GTGTTTCTGG TGCGGGCAAG ACTACTCTTC TCGATGTGTT GGCCACCCGG GTTACTATGG
GTGTAGTTAC CGGTGAAATG CTCGTCGACG GCCGACAAAG AGACATCTCG TTCCAGCGAA
AGACCGGCTA CGTTCAACAG CAAGATCTTC ATCTTGAAAC TAGCACTGTC CGAGAAGCCC
TCCGGTTCAG CGCTGTTCTT CGACAGTCGA ACACTATCAG CATCAAGGAG AAATATGAGT
ATGTGGAAGA AGTATTGAAG CTTTTGGAGA TGGAAAGTTA CGCCGACGCG GTCGTTGGTG
TGCCCGGTAC TGGTCAGTTT AATAATTCTA ATTCTCATCG TCCTCACACT ATATGCTAAC
ATCCTACTAG GTCTCAATGT CGAACAGCGA AAGCGGCTCA CCATTGGTGT TGAGCTTGTC
GCCAAGCCTG CCCTTCTTCT CTTCCTCGAC GAACCCACCT CCGGTCTCGA TTCCCAAACC
TCCTGGAACA TTCTTCTTCT CCTTCGAAAG CTCACTGAAC ACGGTCAAGC TATTCTCTGT
ACCATCCACC AACCCTCCGC AATGCTTTTC GAACAGTTCG ACCGTCTCCT CTTCCTCGCT
AGAGGTGGTA AGACGGTCTA CTTTGGCGAG GTTGGCAAGG GATCTCATAT CCTCATTGAT
TACTTTGAGC AGAACGGTGC TCCCAAGTGC CCAGAGGGCG AAAACCCGGC AGAATGGATG
TTGGCTGCTA TTGGTGCTGC GCCCGGCTCC CATTCTGATG TCGATTGGCA CCAGGCATGG
ATTAACAGCC CTGAACGAGT CGAAGTCCGC CGTGAGCTTG CAAGGATCAA GGAGACTCAA
GGCGGTAAGG GTGAAGCGGC TCTGCAGAAC AAGGATCAGG AAAAGAGCAA GTCGGAAGTC
AAGGCGGAAT ATGCAGAATT TGCGTCACCC TTGTGGAAAC AGTTTATTGT TGTGTTGACG
AGGGTTTGGC AACAACACTG GAGGACGCCT AGTTATATTT GGTCCAAGGC TGCTTTGTGT
GCTTTGTCTG TGAGTTGCTT CAATGCTTTT CTACGCGAGC AATGGGTGTT AATCATCGCA
TAGGCCCTTT TCATTGGATT CAGTTTCTTC AAGGCCGGTA CTTCCCAGCA AGGCTTGCAG
AACCAGTTGT TCTCCGTTTT CATGGTAAGT AATCCCTGAG ACTCTCTTAA TGACCACTGA
CTTTAATGTA GATGTTCACA ATCTTCGGTC AACTCACCCA ACAAATCATG CCCAACTTTA
CCACTCAGCG AAGCTTGTAT GAGGTCCGAG AAAGACCTTC AAAGGCGTAC TCTTGGAAGA
TCTTTATTTT GAGTAACATC GTCGCGGAAA TTCCTTGGGC TAGTGCGTTT TTCTTTTCTT
TTCCTACCTG TGCTCGCGCT AACATCTTTC AGTTCTCATG GGCGCCGTCA TCTACTTTAC
CTGGTATTAT CCCATTGGTT ACTACCGCAA CGCCATCCCT ACCGACGCTG TCCATCTTCG
AGGTGCGCTC ATGTTTTTGT ACATTGAGAT GTTCTTGATC TTCAACGCTA CTTTTGCGAT
CATGATTGTG GCGGGTATCG CGACGGCTGA AACTGCTGGT AACATTGCGA ACCTTTTGTT
TTCCATGTGT CTCATCTTCT GCGGGTAAGT CTTCCTTCCT GCCTCTCTTT ATGAGACACT
CGCTGATTCC TGCTCAGTGT TTTGGCCCCT CCTTCCTCCC TCCCCGGTTT CTGGATGTTT
ATGTATCGTG TCTCACCATT CACCTACCTT GTTGAAGGGA TGCTCAGTAC TGCTGTCGCC
GACACCAATG TCGTCTGTTC CGACATCGAG CTTCTCACAA TGAACCCTCC TTCCGGCCAG
TCTTGTGGCG ACTACATGTC AACTTATATC AGTAATTACG GGGGATATTT GGTGAATGAG
AATGCAACGA CGGCGTGCGA GTTCTGTTCT ATGAGCAGTA CTAACACTTT CTTGGCACAA
TTCAGCATTT ACTACAGCAA CAAGTGAGTT TCCTCGTTTA CTTTACATGG GCAATGAATG
CTGATATGCA AATAGGTGGA GAGATTTTGG TCTGTTGTGG GCATACGTCG TGTTCAACAT
CATTGCGGCT GTAGGTATCT ATTGGCTTGC TCGTGTAGTG CGTACTTTTC GGCTCTTTAC
TCAACCCTCA TTGCTGATAA CCAGTTTAAT TAGCCCAAGA ACACTGGCAA AGAACAAGCA
TCTGAACCGG AGGACGTACA GGAGAAGCTG GTTCCTGCAC AGTCTACTGA GAAGAAACCT
GAGTCGGTGT CTCGAGGCTC CCAGTCTACC GCGGCGTAAA ATTGGAAGAC AAGAAAATAG
GAGGTTATGA TCGTTATGTT TTGAAAGTCT TAGAAAGTAG AATGAGTACA CGTGTATTTA
GTTTTCTCAT CTATCTGCAG CTGATTATAT ATCTGCATGG ACATTGGTA
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| Protein sequence | MAFSGVGQGI GTYDRTEQTS GASLGRVTSR AHFTDVHPND NLPAQTGEHC ARDVGHLARQ
LTRQSVAAAD DSAAIFSYQE GSDLDPFSEK FNAKKWTKLM FEASQSSGPG RKAGLSFRNL
DVHGFGSDAD YQKTVGNLPL VGIGALRDLI GNRKRKVQIL NSMDGVLEAG EMLVVLGPPG
SGCTTMLKTI AGEMNGIYLD ESSSLNYRGI TPKQIYGQFR GEAIYTAEVD VHFPNLTVGQ
TLSFAAEARA PRKPPGGISK KEYAKHMRDV VMSVFGISHT LNTIVGNDFI RGVSGGERKR
VTIAEASLAG APLQCWDNST RGLDSANAIE FCKNLRLNSD YIGISSAVAI YQAPQAAYDC
FDKVSVLYEG EQIFFGKATE AKQFFVDMGF HCPSQQTVPD FLTSLTSASE RTPREGFEGK
IPTTPQEFAT RWKQSDKYQE LLAQIAEFEN KYPVHGEKYQ EFLQSRRAQQ SKRLRPKSPY
TLSYGGQVEL CLRRGFDRLR ADPSLTLTQL FGNFIMALII GSVFYNLPAT TSSFYSRGAL
LFFAILMSAF GSALEILILY AQRGIVEKHS RYAFYHPSAE AVASALTDIP YKVVNCIIFS
LTLYFMTNLR REPGPFFFFM LISFTLTMVM SMLFRSIASL SRSLTQALAP AALLILALVM
YTGFAVNVAN MRGWARWMNW LDPIAYGFES LMINEFHGRE YECAAFIPMG PGYEGATGQQ
LVCSTAGAVA GSSVVNGDDY INLSYEYYHA HKWRNFGILI GFFLFFSAIY ISATEFITAK
KSKGEILVFP RGKIPRALLA QSTHSHGSSD DVEGGKFAGG SKMKKEITGA DRADAGIIQR
QTAIFSWKDV VYDIKIKKEP RRILDHVDGW VKPGTLTALM GVSGAGKTTL LDVLATRVTM
GVVTGEMLVD GRQRDISFQR KTGYVQQQDL HLETSTVREA LRFSAVLRQS NTISIKEKYE
YVEEVLKLLE MESYADAVVG VPGTGLNVEQ RKRLTIGVEL VAKPALLLFL DEPTSGLDSQ
TSWNILLLLR KLTEHGQAIL CTIHQPSAML FEQFDRLLFL ARGGKTVYFG EVGKGSHILI
DYFEQNGAPK CPEGENPAEW MLAAIGAAPG SHSDVDWHQA WINSPERVEV RRELARIKET
QGGKGEAALQ NKDQEKSKSE VKAEYAEFAS PLWKQFIVVL TRVWQQHWRT PSYIWSKAAL
CALSALFIGF SFFKAGTSQQ GLQNQLFSVF MMFTIFGQLT QQIMPNFTTQ RSLYEVRERP
SKAYSWKIFI LSNIVAEIPW AILMGAVIYF TWYYPIGYYR NAIPTDAVHL RGALMFLYIE
MFLIFNATFA IMIVAGIATA ETAGNIANLL FSMCLIFCGV LAPPSSLPGF WMFMYRVSPF
TYLVEGMLST AVADTNVVCS DIELLTMNPP SGQSCGDYMS TYISNYGGYL VNENATTACE
FCSMSSTNTF LAQFSIYYSN KWRDFGLLWA YVVFNIIAAV GIYWLARVVR TFRLFTQPSL
LITSLISPRT LAKNKHLNRR TYRRSWFLHS LLRRNLSRCL EAPSLPRRKI GRQENRRL
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