| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CND00040 |
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| Symbol | |
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| ID | 3257266 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006686 |
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| Strand | + |
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| Start bp | 9444 |
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| End bp | 12501 |
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| Gene Length | 3058 bp |
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| Protein Length | 673 aa |
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| Translation table | |
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| GC content | 45% |
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| IMG OID | 638255943 |
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| Product | transketolase, putative |
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| Protein accession | XP_570357 |
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| Protein GI | 58266402 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0021] Transketolase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.214798 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CGTATTTTGA CTGCGTATTA TGACTGAATC TCCCACTTTC ACTTACGACT TCTTGCATGA
TACCCCACAC TACGTATGCT ATCCCGCTTC CTATATAGCC AATTTCCCAC TGTCAGTCGA
CGCAACGATC AGCTTTTCCT CTTTTCTTTC TTATAATCAT CTATCTATCT AGTTCGTCGT
TGTATTCAAA AATAGAAATT ACCATACAGT AGCCAGAATG TCTGTCAATG TGAGTATCCA
TGGTCGGTGG ATATTGAATT TTATACTATG TGTGAATTAT TCCCCCCCGC TGATGTTCCC
CATGCAGAAA GTTCAAGACT GGGATTTCGA AAAGTTCCCC ATCGACCTCA AAAAATACAA
ACCTTTCCCT CTTGACCCTA CCAAGGACAA GAAGCTTTCA CAAGAGCAAA AAGATGGTTT
GGTAAGTGTT CAGTAGGCAA ATCAATAATT TTTTGGTTGA TACACTGATC TCTGTCTGAC
TTTAGATTGC CAACATCTCA TTGTTGCGTG ATGTGATTGT CTTCTTCACC GCGACAGGTG
CTGCTAGGGG TCTGGCCGGT CATACTGGGT GAGTTTCTCA TCTACCGTCT GGTCAGCATC
TCCGCGATCT TTATGTTAGA ACAACCTCTG TTCCGTTATA GAAATTGCTG AGATATTATG
TTTAGAGGAG CCTTTGACAC CATCCCCGAA GTTGTGATCC TTCTTTCCTT CCTCCTTGCC
GACCAGGACA AGTCGAAATA CGTTGATATT CTCTTCGACG AGGCTGGTCA TCGTGTCGCG
ACTCAGTACC TTCTCTCTGC TCTTGACGGT CACATTCCAG TTGAGCATCT TCTCCACTAC
CGAGAAGCTA ACTCCAAGCT CCCTGGTCAT CCTGAGCTCG GTCTCACTCC CGGCGTCAAG
TTCTCTTCTG GACGATTAGG ACACATGTGG CCCTTGGTCA ACGGTGTGGC TTTGGCCGAG
AAGAACAAGG CCGTATTCAT ACTTGGGTCA GATGGTTCTC AACAGGAAGG CGATGACGCC
GAAGCTGCCA GATTGGCTGT CGCTCAAGGA TTGAACGTGA AGCTCTTCGT TGATGACAAT
GATGTGACCA TCGCGTGAGT GGGGTTAATC TTCTGAGCCT TATAAAGAGC CTGTACGCTG
ATAATCATCC AGTGGTCACC CATCTGAGTA CCTCAAAGGA TACAGCGTCG CCAGAACTTT
GGAGGGTCAT GGACTCAAGG TCGTTGAAGC TAACGGTGAA GACCTTGACT CTCTTTACTC
TGCCATCGTC GAGGTCATGA ACCACAAAGG TCCAGCTGCC GTAGTCACCC ACAGGCCTAT
GGCTCCTAAG ATCAAGGGTA TCGAAGGAAG TCCTCACGCT CACGACGCCA TCAAGGTGTA
GGTGATACGT CTGTAAGCCC GAACGTGAAA CCAATGCTGA TAATTATTCC TTTTGAGTGA
ACCTGCCATC GAATACCTTG ACGCTCGACA CCCTAAATGC GCTGCTATCC TTCGAGCTAT
TCAACCTTCC AACTACGCCG AGTTGCTTTC TGGTAGTACC AAGGAGAGGG GAGCTTGTCG
AGTTCAATTC GGTGAAGCTG TCAGCGCCGT TCTTGATAAA ACTAGCAAAG AGCAGAACAA
GGCAAAGGTG TTGGTCATCG ACTCCGACTT GGAAGGTTCT ACAGGTTTGA GTGTGATCCA
CAAGAAACAT CCCGAGTGAG TTCATGACAC CTTAACTGCC TAATGTACCC ACATGTTTAC
GTCCCATTAC AGAGTATTTT TGTCCAGCGG CATCATGGAA CGTGGGAATT TTTCTGCTGC
TGCCGGTTGG GGTGCTTTCA ACGCCGATAG ACAAGGCGTT TTCAGGTATT GTTTTTTTTT
ACCAATTTTA ATTCATCCAG AAGTTAATTG ACAGGGTCAC GCAGTACCTT CTCAGCCTTC
TCTGAAATGA TCATCTCCGA ATTGACCATG GCTCGTCTCA ACTTTGCCAA CGTTCTCACT
CACTTCTCGC ATTCTGGTGT CGACGAGATG GCTGATAACA CCTGGTGAGT ATTGGGTCAT
CTGTTGATAT ATGTGCTAAT AGGCCATCCT AGTCACTTCG GTATCAACCA ATTCTTCCTC
GACAACGGTC TTGAAGATGG GTACGAGACC AGGTTGTATT TCGCCGCTGA TTGCGTGAGT
TACCACTCAA CGATGTTACT TGATTGAGCA AAAGCTGATT GTTAAACTTT AGTCTCAAAT
GGATGCGTAA GTCACTGAAC TTTGCTGCCC TATGCTTTCT TTTCACATCC TCTCATACCT
TACGCTATTG TTTCTTGTGT CAGAACTCAT CGCTGACATT TATGTAGAAT CGTCGACCGA
GTCTTCTACG ACAAAGGTCT TCGATTCGTC TTTTCCACTC GATCCAAGGT CCCATGGATT
TTGAAGGAAG ACGGATCCAG ATTCTTCGAC TCTGATTACA AATTCGTTCC CGGTAAAGAT
GAAGTTATTC GAAAAGGCAC CAAAGGCTAT GTTGTAGCGT ATGGAGAGAT CTTATACAGA
GCACTCGACG CCGTTGATCG TTTGAGAAAA GAGGGTTTGG ATGTCGGCTT GATCAACAAA
TCGACACTCA ACGTAGTGGA CGAAGATATG ATCAAGGAAA TTGGTTCAAC TGAGTTCGTC
TTTGTCGCCG AAAGTTTGAA CAGGAAGACC GGGTTGGGAA GCAAGGTAAG TTACATTATT
GTCTATTGAT AAAATATGCT AACGGCAAGT ACAGTTCGGT ACTTGGCTTC TCGAACGAGA
TTTAAGACCA AGGTACAATT ACATGTGAGT TAAGAGCGTC GAATTCAAGT GAACTCCTAC
TGATCGCTTT AAACCACTAC AGCGGAACCA GCAAGGAAGG ATGCGGTGGG CTTGGTGAAC
AAATTGGTCA CCAAAACCTC GGTAGCTCTG ATATCGCTCT CAAGGTGAAG CAAATGATCA
AGTGAACCGA TCTTGGACAT CCATGTCACG ATGATGACAC TGTTGAAGGA ATAGATCAAG
TGAGAAGCTT TTTGATCAAG TCAATTTTAT AAGTACAATT ATGCAAGACA TATGAATG
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| Protein sequence | MLSRFLYSQF PTFVVVFKNR NYHTVARMSV NKVQDWDFEK FPIDLKKYKP FPLDPTKDKK
LSQEQKDGLI ANISLLRDVI VFFTATGAAR GLAGHTGGAF DTIPEVVILL SFLLADQDKS
KYVDILFDEA GHRVATQYLL SALDGHIPVE HLLHYREANS KLPGHPELGL TPGVKFSSGR
LGHMWPLVNG VALAEKNKAV FILGSDGSQQ EGDDAEAARL AVAQGLNVKL FVDDNDVTIA
GHPSEYLKGY SVARTLEGHG LKVVEANGED LDSLYSAIVE VMNHKGPAAV VTHRPMAPKI
KGIEGSPHAH DAIKVEPAIE YLDARHPKCA AILRAIQPSN YAELLSGSTK ERGACRVQFG
EAVSAVLDKT SKEQNKAKVL VIDSDLEGST GLSVIHKKHP EVFLSSGIME RGNFSAAAGW
GAFNADRQGV FSTFSAFSEM IISELTMARL NFANVLTHFS HSGVDEMADN TCHFGINQFF
LDNGLEDGYE TRLYFAADCS QMDAIVDRVF YDKGLRFVFS TRSKVPWILK EDGSRFFDSD
YKFVPGKDEV IRKGTKGYVV AYGEILYRAL DAVDRLRKEG LDVGLINKST LNVVDEDMIK
EIGSTEFVFV AESLNRKTGL GSKFGTWLLE RDLRPRYNYI GTSKEGCGGL GEQIGHQNLG
SSDIALKVKQ MIK
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