| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CND00020 |
|---|
| Symbol | |
|---|
| ID | 3257239 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006686 |
|---|
| Strand | + |
|---|
| Start bp | 3730 |
|---|
| End bp | 6005 |
|---|
| Gene Length | 2276 bp |
|---|
| Protein Length | 545 aa |
|---|
| Translation table | |
|---|
| GC content | 51% |
|---|
| IMG OID | 638255941 |
|---|
| Product | myo-inositol transporter, putative |
|---|
| Protein accession | XP_570347 |
|---|
| Protein GI | 58266382 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | [TIGR00879] MFS transporter, sugar porter (SP) family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGAAG GCGGTAACAA TCAGACATCC GTCAATATCA GCAAGGAGGA CTTGAAGGTT
GAGACCGAGC ACTATGAAAA CGTTGCCTAT ATCGCCAGTA CTCACGATGG CCTGATAGTG
AGTACCCAAT CGAGTCGCCG CCGATGTATG AAACTGCATC CGATTGATGC AAGTAGGACG
AGAACCTCGT TCGAGCCGAG AACGAGGACA AGGTGACCCC TTATTTTATG TTTCTCATAT
CAGTTGCCGC CATTGCGGGC TTTTTGTTTG GATACGGTGG GTGATCACGA CCGATCTCGC
CCTCTTTTGC TCAAGTCCGA TAGACACTGG CATTGTCGGA GCAGCCTTAC CAATGGTGGA
TACCGCCCTT GGTCACACCC TCTCGGCTAC CGAGAGTGAG ATTATTACTG CTGGCACGAC
AATCGGTGCG ATCTTCGGTG CTTCAATCCT CGGTACCATG GCCGATAAAT TGGGCCGTAA
GTGGGCCATG GTCATTTCCG ACTTTGCGTA AGTATCACCT TTGTCAAAAC CGCGGATTTT
TCGGCTGATG TGAGAAGCTT CACTGCAGGC GCGATCATCA TTGCCGCGAG CTATTCGGTT
CCCCAGATAA TCGTCGGTCG ATTGGTCCTT GGTGTTGGCG TTGGAGGCGC CGCTGTTATC
GCTCCTCTCT ACATTGCCGA GCTCGCCCCG ACCGCTGTTC GAGGACGTTG TGTCGGAGTC
AACGCCTTTT GCATTCCTTT CGGTCAAGTC ATCGCCAGTG CCATTGGCGC CGGTTTTCAA
GCAGGCGTTC CATATCATAT CGGGTGGCGA GTCCTCTGTG AGCAAACTTT AGCTCTGATT
TTGCGCTTGA GTTGATTCCG TGCAGTCGCA CTGGGTGTTG TTCCTTCGGT TGTGCAACTC
TGCCTCATGC ATTTTCTCCC TGAGTCTCCC CGAGTATTAG TCCTTCGAGG CAAAGAGCAG
GAAGCCCGGG TTTGTTTGAA GAAGATTTAT GGAGCCGCCA CGGACGACAT CATCGATCTC
AAACTCCGAA TCGTCAAGCA ATACGTCGCT GCCACGACAG CCATGCAGCG CGACCTTTCT
TTTACTGAGA GAGCCAAAAA GTACTGGACT CACAAGCCCT ACCGAAGAGC TATCATTTCT
ATCTCTGGAG TTCAGGCTTT TGGACAATTG ACTGGCTTCA ACACGCTACT CTACTATTCC
GGCACCATCT TCGGTCTTCT CGGCATAAAA AATGGATCCG CCGCCGGTCT CATCCCCTCG
TGCCTCAATG CTCTCTTTGT GGTGAGTCAT ATTGCATGGA AGGAATAAAT ATCAAGCTGA
CGTTGTCAGT TCATCGGAAT GAGCATTGTC GACAAGGTCG GACGTCGTAA ACTCATGGTC
ACTTTCATTC CCGGAATGAT GATCGCTTTT ACTTGGACGA TCATTTCCTT CCACTGTATG
TCTGTTCCCT CTCTGCCAGT TACATAGTCA TTGATGTGAG CCTCAGACCT TACTAAGCCA
ACTGGCGGTC TTCTGCTCAA GGACTACCAG TACTCGACCC CCTTGGTTGG TAGCGTTCTC
GGCTCGATCG TTCTCTTCGT CATACCGTAT GGCCTTACCT ACTCCCACAT CATCTGGTAT
CAATCCGAGT TCCTTCCGCT GGAGATCAGA GCGGCTGGTT CGGCCATCTC CACCACAGCC
TGCTGGCTCG CTAACCTGGT GGTCTCCGTC GCCTATCTCA CTCAGCTCGA GAAACTAGGA
GCCACCGGCA CATACGGCCT GTATCTCGGT TTCATCACCA TCGGTTATGT TTTTGTCTAT
TTCTGCTATC CAGAAACCAG TCAGTTACCT CGTAGATCTA CGATACGTCC AGCTAATCGC
TTTTTCAGAG GGTCTTTCGA TCGACGAGAC TGCCGAAATC TTCATCGATG GTTTCGGCAT
CGAGAAGGCC CACCAGATGC TGAGAGAGAA GCGGGCATTT GCTGCCGAGC TTCATGCCAA
CAGGGCTTGA GTCTGAATTC GCACCAAACT CGCTACGGAT CATTGGATTT TTTTGGACGA
ATACAGAGAG CACTGTAAAG ATGACGAGAA CTCTAAGAAG GAAAGAAAAC AACCGGAAAA
AAATGGTCAG AATCCAAGGT GTGGGGAGAG AATCATGGGC ATGATGCCAG ATTCGGATTC
ACACTGCGGT GGAGATCCGT TTGCCGGTCG GTGGACCGAA CGAGGGAGTG ATCGCCCTAA
CGACCGGGGG AGAGAATCAT GGGCATGATG CCGGATTTGG ATTCACGCTG TGCTGG
|
|---|
| Protein sequence | MPEGGNNQTS VNISKEDLKV ETEHYENVAY IASTHDGLID ENLVRAENED KVTPYFMFLI
SVAAIAGFLF GYDTGIVGAA LPMVDTALGH TLSATESEII TAGTTIGAIF GASILGTMAD
KLGRKWAMVI SDFAFTAGAI IIAASYSVPQ IIVGRLVLGV GVGGAAVIAP LYIAELAPTA
VRGRCVGVNA FCIPFGQVIA SAIGAGFQAG VPYHIGWRVL FALGVVPSVV QLCLMHFLPE
SPRVLVLRGK EQEARVCLKK IYGAATDDII DLKLRIVKQY VAATTAMQRD LSFTERAKKY
WTHKPYRRAI ISISGVQAFG QLTGFNTLLY YSGTIFGLLG IKNGSAAGLI PSCLNALFVF
IGMSIVDKVG RRKLMVTFIP GMMIAFTWTI ISFHYLTKPT GGLLLKDYQY STPLVGSVLG
SIVLFVIPYG LTYSHIIWYQ SEFLPLEIRA AGSAISTTAC WLANLVVSVA YLTQLEKLGA
TGTYGLYLGF ITIGYVFVYF CYPETKGLSI DETAEIFIDG FGIEKAHQML REKRAFAAEL
HANRA
|
|---|
| |