Gene CNC07090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNC07090 
Symbol 
ID3256508 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006685 
Strand+ 
Start bp2075464 
End bp2076559 
Gene Length1096 bp 
Protein Length249 aa 
Translation table 
GC content50% 
IMG OID638255929 
Productconserved hypothetical protein 
Protein accessionXP_569834 
Protein GI58265356 
COG category[C] Energy production and conversion 
COG ID[COG1905] NADH:ubiquinone oxidoreductase 24 kD subunit 
TIGRFAM ID[TIGR01958] NADH-quinone oxidoreductase, E subunit 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0210016 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTTTCG CACGTTCAAC CATCCAATCC GTAAGGAACA CCCTCGCAAG GCCTACCAGA 
CGTTCTTTCG TCTCTTCCAC CTCCCGTCTT TCAGATGCGC TCTTCGTCGT ATGTCCCCTT 
TATTTACTGC CTGGCGAAAA CAACTGCTAA CATTGGCCTT TTTATTCGTA CATCTAGCAC 
CGCGACACAG ACTACAACAA CCCTTCTATT CCATTCGAAT TCACCCCTGA AAACCTCAAA 
CGCGCACATG AAATCATTGC TCGCTACCCA CCGCAGTACA AGAAGGCTGC TGCTTTGCCC 
ATTCTTGATT TGGGTCAGAG ACAGAACAAG GGATGGACTA GTATTAGCGT CATGAACGCT 
GTTGCCAAGT TGTTGGACAT GCCCAAGATG AGAGTTTACG AGGTGAGTCC AATTCGCTTT 
GAATCATCTT AACCCTAGTT GGATGCGGTG AGGGATAAGA ACTAAAACGC GCACCCTTAT 
AGGTCGCTAC ATTCTACACA ATGTACAACC GCGAACCCGT CGCCCCCAAC TTTGTCCAAC 
TCTGCACTAC CACCCCTTGC CAACTCGGCG GCTGCGGTTC CACCAAGATC CTGGAGACCA 
TCGAGTCCCA CCTCGGCGTC CACCCCGGCC AGACAACAAA GGACGGGAAA TTCACTTTTG 
TCGAAGTTGA ATGTTTGGGA GCGTGCAGTA ATGCGCCAAT GATGCAGATT GGAGATGATT 
ATTATGAGGA TTTGACCCCG GAAACGACGG TAAAGATTTT GGATGCGCTT GCGCGTGGGG 
AAAAGCCAAA GCCGGGTCCT CAGTCTGGGA GACAGACGTC AGAGAACTCT GCGGGGTTAA 
CGACTTTGAC TACAAAGGTG AGCACCTTTT TCTTTTTCTT TCTCTCCAAT TGTGCCAAAT 
AGCTAATTTA TATTTCTAGC CTTACGGACC AGGAGAGTTT TGTTCACCTG AATTCCAATA 
GACACATCAG GCTAGAGGGG TTTTAGAGTG AAAGTGTAGA GTAGGGGTGT GGGCTTGTTC 
GTCCGTCCAA GCGGATGGGT AGGTTCGGGA GGGCGCGCGG CTGGGGCACG ACATGCATTG 
TTACTTATTA GGGCTC
 
Protein sequence
MSFARSTIQS VRNTLARPTR RSFVSSTSRL SDALFVHRDT DYNNPSIPFE FTPENLKRAH 
EIIARYPPQY KKAAALPILD LGQRQNKGWT SISVMNAVAK LLDMPKMRVY EVATFYTMYN 
REPVAPNFVQ LCTTTPCQLG GCGSTKILET IESHLGVHPG QTTKDGKFTF VEVECLGACS 
NAPMMQIGDD YYEDLTPETT VKILDALARG EKPKPGPQSG RQTSENSAGL TTLTTKPYGP 
GEFCSPEFQ