Gene CNC07080 details

Gene Information

• Locus tag: CNC07080
• ID: 3256657
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006685
• Strand: -
• Start bp: 2073249
• End bp: 2075189
• Gene Length: 1941 bp
• Protein Length: 559 aa
• GC content: 54%
• IMG OID: 638255928
• Product: hypothetical protein
• Protein accession: XP_569833
• Protein GI: 58265354
• COG category: [D] Cell cycle control, cell division, chromosome partitioning; [Z] Cytoskeleton
• COG ID: [COG5184] Alpha-tubulin suppressor and related RCC1 domain-containing proteins

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.000492685
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCCCGCC TACACAGGAC TCTCCCGCTC ATCACAGCAT CAGGCATAGC ACTCACACTC 
TATGCCACCC ACGCACAGCT CCACCCTCTC AAGCTCGACT CGGTATTCCC CACAACCAAG 
AAAGTCAAGC ACGCATCCAC CACTTTCCCG CCCTACACAC CGATCGGCTG GGGATCAAAC 
AGGAACCTCA CGCTTATCCC TCCTCAATTA GACCAGGACA AGGAGAACAC ACAGGAGACA 
CCGGTACTGG TAAAGCGACC CGCGCCGTTA TTACATCTCG GAGGAACACC TTTACGGGAT 
TTAGTGATTG CAGAGAATTA TGCCGCGGCG TTGGATGCGA ATGGGGATTG TTGGTTATGG 
GGAAAAGGGT ATGACCCGAC GGGTAGAGTT GGAAAGGGAC TGGTAGGCAA GGTATGTCTT 
ATATCTGATT ATATAAAATC CGAGGGAACG CTAAACAAAG AGCAAACGTA GGATCTGAAC 
ACGTTGGTAC CAGGCCAGTC CAAGCTATTC GCCCTCAGCC GATCTGGCAA GCTATACGCC 
TTTTCACCCG ATTCTTCTCT CCACTCGGCT TCCTCTTCCT CTTCGACATC GGACAACTCT 
AGCTGGCTAT CCTACTTTAC CCCTTCACGC TCCCAAGATA TCCCGCACGT CGAACTCGAA 
GCCAATGGCG GTCTGTCCTG GGGCGAGAAA TGGAAACAAG TAGCCGTAGG CAGCCATCAC 
TTGTTGGCGC TTACCACCAA AGGCAGAGTA TTTTCCATGC CGCTTTCTGA AAAGGGAAAT 
GATTTCCGTC AACTCGGGAC GAGAGAAGAA CTCGTCTCTA GCAAACCCCT CCTTGCCCCT 
TCCTCCACCC CTTCTTCCTC TTCCCAGCCA TCGAAAGATA TCATCTACCG AACCCACCTT 
GATCCCATCC CATCTCTCTC TACCATCCCC ATCACCCGCA TCGCCACAGC CTCCCACACC 
TCGTACGCCA TCACATCTAC CTCTCGCCTC CTCTCCTGGG GCGCCAACTC GCTAGGCCAA 
ACAGGTCTCG GCGGGTCCAA CACCACCCCG CTCGTCCCGG TGCCTATCGA GATCGTCCTG 
AGCAAGGCTT ACCCCGCTGG CTCACCCATA AACGTCGAAT GTGTGGACGT AAAAGCAGGA 
GGTGACACCG CATTTTTCAC TGTGAAGCGG ACCCATCCGG GGAGGAGAGG AGAGTGGTTC 
GATCTCTTGG CTTGTGGAAG TGGCTTGATG GGAGCGTTGG GCACGGGATC GTACAGCTCC 
GCCCAAGGTG TCCCCGGAAA AGTCAAGGTC ATTAGCGGGC TACAGGAGTA CAGTGAGAAG 
GAAAAGACAT TCAAGCCGCT GGGTATATAT CAGTTGAGCG TGTCGCCTTC AGCGGGTGCG 
AGTGTGGGAG TCGGTGGAGG AGAAGGGGAG GGAGGGATGG GAGGGACGCA TGTGTTTGCG 
GTGCTGGATA CATTGAGAGG CGGGGAAGGG AAAGAATATG GACGGGATGT GTTTGCGTGG 
GGTGCGAATG GTACGTCCCT TTCCTTCTCC TTAACATGAC ATACACTAAC CAAAATCTCC 
GCTTATCTTT TACTTTTAGT GGAATACCAA TTGGGCATGG GTAAACGTAC ATCCATCCCT 
ATTCCGACGT ATATCCCAGC CTTGGGCAGT AAACCTGATC GAAGCGGGGG CTGGAGTGGG 
AACGAGCTGG ATGCAGCTGG TGTTGATGCC GTGAGCGTTT CTTTTTTTTT CTCGTTTCCG 
GCCCCCAACC CCAAAGCACC ACAGCGCAGC TCGCTAATCA TGATACTTCA CCCCATACAG 
AACCGACTCC AACTCCACAC CTCCCCCTCC ATCCCAGCCT ACTCCCCAAC GGGCCAACTA 
TTGAGACGAA GAGTCAAGTG TGAAGAGACA ATCGTAGCTG GGTGTGGGTG TAGTGTTGTT 
TATTGGAAGA TTGTGGAGTA G 

 

Protein sequence

MPRLHRTLPL ITASGIALTL YATHAQLHPL KLDSVFPTTK KVKHASTTFP PYTPIGWGSN 
RNLTLIPPQL DQDKENTQET PVLVKRPAPL LHLGGTPLRD LVIAENYAAA LDANGDCWLW 
GKGYDPTGRV GKGLLFALSR SGKLYAFSPD SSLHSASSSS STSDNSSWLS YFTPSRSQDI 
PHVELEANGG LSWGEKWKQV AVGSHHLLAL TTKGRVFSMP LSEKGNDFRQ LGTREELVSS 
KPLLAPSSTP SSSSQPSKDI IYRTHLDPIP SLSTIPITRI ATASHTSYAI TSTSRLLSWG 
ANSLGQTGLG GSNTTPLVPV PIEIVLSKAY PAGSPINVEC VDVKAGGDTA FFTVKRTHPG 
RRGEWFDLLA CGSGLMGALG TGSYSSAQGV PGKVKVISGL QEYSEKEKTF KPLGIYQLSV 
SPSAGASVGV GGGEGEGGMG GTHVFAVLDT LRGGEGKEYG RDVFAWGANV EYQLGMGKRT 
SIPIPTYIPA LGSKPDRSGG WSGNELDAAG VDANRLQLHT SPSIPAYSPT GQLLRRRVKC 
EETIVAGCGC SVVYWKIVE