Gene CNC07020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNC07020 
Symbol 
ID3256232 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006685 
Strand
Start bp2048845 
End bp2051651 
Gene Length2807 bp 
Protein Length697 aa 
Translation table 
GC content49% 
IMG OID638255921 
Producthypothetical protein 
Protein accessionXP_569850 
Protein GI58265388 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0156] 7-keto-8-aminopelargonate synthetase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.22515 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTTTCGCATC CCGCTTATTA GAAGCTTCTA CTACCTGTCT TCCTACATCT TCCTTCTTGC 
TTCCCACCAG CGTAACTGGC CAGTCGCCAC CGCTACCCGT TCTTCCTTCC TTCCCGCTAG
TCGCGTCAAC TGTCGCGTAA GATTTCTTAC CTCCGCGAGC AGGGCGAATT TCCTACCCTC
CTCTTACGAC AGAGATAATG GGCCGCACCA CCAGACGCTC AGCAAGGCCC CAATCGGGTA
CATCTACTCC CCCCAACATC TCCTCTCCGC CTTCGCGCCC TTTGTTTCCC AGCATCTCCC
TTCGCTCTTC ATCGCCTACT CCACCTACCC ACGAAAACCT CTCAGCCCGG TCCTCTCTCC
TCAGCGTGCT CACACGACCA GCCCATTCAG TCGCAGCGAC GCCAGATTCG CCAGAGGAAG
AGCTCTCGGA TTTGTCGACA GTAAGCAGCT ATGCCTCGAG TGTTATCTCT GGTACACATT
CAAAGGACAT GACCGAAGAG GAGATTGCAA AGGTATATGA GAATTATTTG GAGAAGCCAT
TCATCCAAAT AAAGACTACA ATAAAGCATA GCGAGTTTGG ACATTGTAAC AATCCCAATT
GGCGGTGGAC CAGTCAGGTA AGTACCGCCG AGCGCGTAGC ACGACTTGTA ATGAAAGATT
TTGGGTTAAC GATATCAGTG GAATCCCAAC GAAGTGATTC ATGCCGACGA TGCCAGACCA
TCCTACACTG TGTTACTAAG TACATACTTG AGTTACATCC TGCTTATCAT TATCGGTCAC
ATTCGAGACT TCTTCGGTAA AAAGTTTACA CCAGCCTCAT ACGCTCATTT GATGCCCCAG
AACGTAAGTC CTTGTCTCGT TTACGTGGCT AACATGTACA GGGCTACGCC GCGCTCAACT
CCGACTTCGA CTCTTTCTAC ACCCGTCGAT TAAAGAAACG TCTCGACGAC TGTTTCGCGC
GACCTACCAC CGGTGTCCCC GGTCGAACCA TTGTCTGCTA CGATCGTTCC TCCACCGACC
AGAACAACAC TTTTCAATTG ACTGGTACTA CAACGCGCGC TTTGAACGTT TCCTCTTATA
ACTATCTCGG TTTCGCCTCT TCTACAGGTG GCTGCGCCGA TGCTGTCGAA ATGGCCATTA
AGCGATACGG TGTTGCCAGT GCCGGTGCCA GACATGAAGC TTCTACTACC GACCTTCACT
TACAATGTGA GAAACTCGTC GCCAAGTTTC TCGGTGTTGA AGCGTCCATG GTCGTTTCGA
TGGGTTATGC CACCAACTCG ACTACGATCC CTGCGTTGGT TGGTAAAGGC TGTCTTGTGA
TTTCCGACGA ATTCAACCAC GCTTCTATCC GTGCCGGTGT GAGAATGAGT GGGGCTTCGA
TGAGATGGTA CAAGCACAAC AATATGGATG TGCTTGAGAA CTTGTTGAGG GAAGTCATTT
CACAAGGCCA ACCCAGGACT CACAGGCCGT GGAAGAAGAT ATTGGTTATT GTCGAAGGAT
TATTCTCAAT GGAGGGTAGT TTGGTTGATC TTCCCAGATT GATTGAGCTC AAGAAGCGTT
ACAAGGTGAG TCATTACTGT TCGTATGAGA TCATTCACGC TGACATATGT CAGTTCTATT
TGTATGTCGA TGAAGCTCAC TCTATCGGTG CGATGGGCCC CAACGGTCGA GGTGTTTGTG
ACTATTTCGG TATCGACCCC CGTGAAGTCG ACGTCTTGAT GGGTACCGTC ACAAAATCGT
TCGGTGCTGC CGGTGGTTAC ATCGCGGGTA GCAAGGAACT CGTCGACCGT CTCCGTGTCC
GATCACACGC TACCGCGTAC GCTGAATCCG TATCTCCTGC CGTTCTCACC CAGATCATCG
CTTCTATGGG TTCTATCATG GGCATTGCCC CTCCCCTGGC TGCCCCTCCC ACAGAGGACG
ACAAGTCCGA GACATGGTCC ATCGCATCCC GTCCAGCAGT GTACGGCCCC GCCCCATCTT
CCCTCCTCCC CCCTTGGCTC ACCCTCCCTC CTCACTTACT CAACGGAACC GAGGGCCGCG
AACGTCTCCG CCGTATCGCT TTCAACTCCC GGTACCTCGC TTCTGGTCTT CGCAAACTGG
GCTTCATCGT CTACGGTAAT CGGGATTCAC CCATCATTCC TCTTCTTATC TTCCAGCCCG
GTAAGATGGG TTACTTTTCT CGTATGATGC TCGAGCGTAT CGGCCCCGAC AAGACACCCA
TCGTCGTCGT GGTCGTGGCC TATCCCGCGA CCCCACTCAT CACTTCCAGA GTCAGATTCT
GTCTCTCGGC GAGTCACACG AAAAATGATA TGGACATGGT CCTCAGGGCA TGTGATGAAG
TTGGAGATGT GTTGAATTTG AAATATAATA AGCAGGAAAT GAGTGTGGAG GAAGTCATTG
CCAATGCTGA GGAGCTGGTT GCTGCTTCTC ATGTTTAAAC ATGGGGTGAA GAATGAGTGT
GTTCATTTTG CATATGGAAG GGAACGATGA AGGACGAACT AAATCATACA GCGTTTAATT
ATTTTCACAC CTCTTTTTTC GTCTTTTTCG TTTAATCCTT CTCCATTATT TTATTTTACA
ATTTCTCAAC AAGCAATTTG AATCGTACAT TTTTCCTAAT TTGTTTTCTA TCACCTTTTT
TCTCACCTTC TTGCAAAGCA ACAAGCAGCT TAGATTGCTT CAATTGCGAA ACAAAGCTAG
AATCTGTAGG AGCTAGAACC TATATAGCCT GGACTGGATT CTAGGGAGTA TTCGTCTTTC
TTTTTGGTCT GGTTTCTTTT GCCTATTATA TGTAAATAGG ATAAAGG
 
Protein sequence
MGRTTRRSAR PQSGTSTPPN ISSPPSRPLF PSISLRSSSP TPPTHENLSA RSSLLSVLTR 
PAHSVAATPD SPEEELSDLS TVSSYASSVI SGTHSKDMTE EEIAKVYENY LEKPFIQIKT
TIKHSEFGHC NNPNWRWTSQ WNPNEVIHAD DARPSYTVLL STYLSYILLI IIGHIRDFFG
KKFTPASYAH LMPQNGYAAL NSDFDSFYTR RLKKRLDDCF ARPTTGVPGR TIVCYDRSST
DQNNTFQLTG TTTRALNVSS YNYLGFASST GGCADAVEMA IKRYGVASAG ARHEASTTDL
HLQCEKLVAK FLGVEASMVV SMGYATNSTT IPALVGKGCL VISDEFNHAS IRAGVRMSGA
SMRWYKHNNM DVLENLLREV ISQGQPRTHR PWKKILVIVE GLFSMEGSLV DLPRLIELKK
RYKFYLYVDE AHSIGAMGPN GRGVCDYFGI DPREVDVLMG TVTKSFGAAG GYIAGSKELV
DRLRVRSHAT AYAESVSPAV LTQIIASMGS IMGIAPPLAA PPTEDDKSET WSIASRPAVY
GPAPSSLLPP WLTLPPHLLN GTEGRERLRR IAFNSRYLAS GLRKLGFIVY GNRDSPIIPL
LIFQPGKMGY FSRMMLERIG PDKTPIVVVV VAYPATPLIT SRVRFCLSAS HTKNDMDMVL
RACDEVGDVL NLKYNKQEMS VEEVIANAEE LVAASHV