Gene CNC06770 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNC06770 
Symbol 
ID3256731 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006685 
Strand
Start bp1981814 
End bp1983135 
Gene Length1322 bp 
Protein Length336 aa 
Translation table 
GC content48% 
IMG OID638255897 
Productmitochondrion protein, putative 
Protein accessionXP_569860 
Protein GI58265408 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGTTCT TCGAAAAACT CATGACTCGA AGAGGGTCCA CTGATTCCCA GATGAAATTC 
GTCTCCTGTA AGTGATGTCG AACGTCTATT CGAAACTTAG TCGACAGGTG AACTGATATT
TCTGGCTACA GATCGATCAA GGTTACATCC CCAGGGCATA GTTGGGCTAG TGGACTCCAC
CGAACAGTTC GTAGCACCGC TCAGTTTCCC TGATAATACC CTTGTACGGA CGATGCAGCA
ACTCATCGAA GAATGGGACG CGACACATCG CCATTTACTT CACGGTGCTC CTATGGAAAG
CTTGGACATT GTAGAAATTC TTGCACCTCT TCGAGGAAGG GATGTTATTT GTGTTGGGAA
AAACTACAGG GAACATGCCG AGTGGGTGCG ATCGCTGTTT AAGCTCGTCA AATATGTCGG
TTGACGTTCA AGTAGAGAAT TTCATAACAG TGGTTTTGAC AATAGTGATA ATAAAGCTCA
ACCTGACTTC CCTGGTGAGT ATTGTTTGAA ATCGATCATT CAGTTGTTTT GATTGATCTG
GATTGCAGTG ATTTTCACCA AGCGCGCAAC GTCAATTATT GGCACCAACC AGGAGATCTA
CCCTCATCCC AGAGTGACTC AGACATTAGA TTATGAGGGT GAATTAGGCA TTATCATTGG
AAAAGCTGGC ATCCAAATCT CCAGGGAAGA TGCTTGGGAT TACGTCTGGG GTGCGACTAT
CATCAATGAT GTGAGTTAAA ATTGCAAATG ATCTGTGGAT GCACTGACTT CGCGAGGTAG
GTCACTGCTC GAGAAAGACA ACGAGACCAC AAGCAATTCT ACATCGGGAA GTCTCTAGAC
ACATTCTGCC CTATGGGACC TTACGCCGTC CACTGTAAGC TTATCCAAAC GCCTTGCAGG
AAGTTAAAGC CTTCTTTGAC ACTTCCACTA ACCCATCTTC AGCTTCTGTC CTAGACTGGC
GCAATATGAT GCTCGAAACA CGCGTGAACG GTCAGATTCG TCAATCCGCC AACACTTCAC
AGCTTATCTT CGACATCCCC GCCCTCATCG CCACCTGCTC AATGGGTATC ACCCTCCAGC
CCGGGGATGT GATTTCTACC GGAACTCCGG CAGGGGTATG TCTCTCTTCG GGCGAGTTTT
TGAAGCACAG GGATGTTATC GACATTAGTA TGTCCGGATT GGGAACATTA TCGAACACCG
TCGGAGATCC TAACAGACCC CCACCGGCTT GTGCGCCATT GAACGAAAAG GTGCTTGTAA
GATCGAATGC CACGATAAAA GGGATGAGGT TGGCTGGAGA AACTGGCCCT GTGGGGTCAT
AA
 
Protein sequence
MSFFEKLMTR RGSTDSQMKF VSYRSRLHPQ GIVGLVDSTE QFVAPLSFPD NTLVRTMQQL 
IEEWDATHRH LLHGAPMESL DIVEILAPLR GRDVICVGKN YREHAEWVRS LFKLVKYVVI
FTKRATSIIG TNQEIYPHPR VTQTLDYEGE LGIIIGKAGI QISREDAWDY VWGATIINDV
TARERQRDHK QFYIGKSLDT FCPMGPYAVH SSVLDWRNMM LETRVNGQIR QSANTSQLIF
DIPALIATCS MGITLQPGDV ISTGTPAGVC LSSGEFLKHR DVIDISMSGL GTLSNTVGDP
NRPPPACAPL NEKVLVRSNA TIKGMRLAGE TGPVGS