Gene CNC06560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNC06560 
Symbol 
ID3256825 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006685 
Strand
Start bp1920399 
End bp1923169 
Gene Length2771 bp 
Protein Length675 aa 
Translation table 
GC content56% 
IMG OID638255875 
Productconserved hypothetical protein 
Protein accessionXP_569950 
Protein GI58265588 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CAACATTGAT TCACCCTCTT CATTCCTTCC TTCCATCCTC AACGGTATAG TGAACCGCCT 
CTCCCTATCC GCAACTCGCC GCCGCCGCCT TTGCCACTCG GCTGCCATCA CGGCCGATCT
AATCACCTCC CCCATCACGT CACGCCGCAC TGCCACGCCC CATCACATCT CATCTCCGTC
GTCTTCCATC TTCCACATTC TTTCTCCGTC CTTCCTGTTC CCATAAACCG TCTTCGGCCT
TGCACTCGCC ACCACTCCGG GGGAGTAACC GTATCTTTAT CGTCGATTTT TGGGTGCCGC
TCAATACACA GGGCACATTG CCAGGACAGA CCAGACTACA GAGCACAAAG GACCCTTTGT
CTCCATAACT GCTAGGTCTC TGGAGAGTCC CAAGACTTGC GTGCTGGATT CCACTATAAC
AAACAGCCAG CAACTCGTAT ATCTGCTGTT CTCTGCTTCT TTCAGAGCTA GATAGAAGCA
AGGACACGCG TCGTCAATTT CGGCTTCATC ACGCTTACAC CCGAGCCCGT ATAAATCCCG
ATCCTCATAC TTCACTCCAA CAACCCACCG CACAGCGCAA TAATGTCCGT TCCACTCCCT
TCTCCCTCTC CTCTCGCCTC TGCTCAGGAC GGACCTACCG GGAGCACAGG CGACAATTCC
AACACGTCTG CTTCTGCAAA GCCCATCCCC CGCTCACGGC CCACTCCTAT TGCCACCGCC
GGCTCGCCTG AAAAGGCCAG CGGTACCCCT GCCTCATACA AGTATCGTCC TGGCGCAGCG
ACTTCTATTG GCAAGTCGTT CAACAATGAC AACTGGCGCG ATCGATCGCC CGCACCCAGT
TCCGCCATGC CCGCTACTGT AAGTGGAAAG GGGTCTGAGC GAACAGTGGG ATTCGAGAAG
CGGGATGTTA GCTCTTTGAA GGGCAACGGA GGCAGCGCGT TGAGTAGGGA GAGAGAAAAG
GAGGAAAACA AGGAAAGGGA AAATGAGAAG GACAAGGAGG GCAAGGAGAA ATGTAAGTGA
TGGCTGAGCT ATTGCGCGCA ATGCATACGC TGAATAACAA TGTAGCTGCC TTGAGCCATG
TCCCTTGTCG ATTCTTCAAG GCTGGTGCTT GTACCGCTGG AGAAAGTTGT CCATTCTCTC
ACGCTGCGCC GGACTGTGGG TTTTGGATTC TTGCCTCGTA CATTGAAATC TGTTTCTGAT
CCACGTTTGT AGCCGCAAAG CGGGAGGTAT GTCAGTGGTT CTTGAAGGGC AATTGCAAGT
TTGGCCACAA GTGTTAGTAT TTCCAATCAG TCACAAGCTA TATAGTTGAC AATGAATCGA
CAGGTGCTCT TGCTCACGTT CGACCTGGAG AGCCGATGTC GATGGATCGA AAAAACAAGA
AAGCGGCGCA GCTCGAAGCC CGAGAACGAA GTGGTGAAGT CACTACCAAC GGGACCAGGA
AGGCTACCCC CACTGCTATC CCCAGCGCCT CTGAAGAATC TGGCGCCAGT CCCGTCCCTA
TCCGATCGGC ACTTTCCTCC TCAATCCAAT CGAATTCTAC TCGTATTGGA TCTTCCCCTA
TGCGAGAGCC TTTTGGTCCT CCCTCTGGGG CTTTGCCGAA CAGCCCTCCT GCTGGATTTG
CTCACTCTTA TACAAGGGGC CATCCAGCCT TTGCTTCTTC GCCCAACCGT CCTTCTCCTC
TTTCTGCAAG CTTTGGTGCC GTAGGCAGTG GACTTGCTTC CGGCAGCGTT CCTGGACCCT
TGTCCCTTAA GCCGGGCTCA AACGTCCTCT CCTCTCTTCG CCCGCCGGTC ACCGCTGCTC
CCACATTCTC CTCTTCATTC TCTCATTCAT CATTGGCTAT CGAGCGTCCT TCCAACGCTG
TCGCCACACC TCTTTCCGCG TCTTTTGCTG GGGAAGCTCC TCCATTGCAC CGCTCCATTT
GGGCTCGTTC CGACCAACCT GCTGAACCTC TGTCTCCTCG TCGACCGATC CCCCGGACCA
TCAAGCCCGA AGCCGTTTTT GAAGACGATG ATGACCACGG AGAAGAGTTT CTGCCTTCCT
CTCTGTCAGA CCTTCTCACC CCGCAAGAAC GGGCCCGCCG TATGTCTCGC CGAGACAGCC
AAGACTCTTC ATACTCTCCT TCCCTCGCTG CATTTGCTGC TCAAGCTCCT GTATGGGGAG
GCGAGCGTCT TGCACAGAGT GCAGGCCCTA CCATGGGACA AAAGGGATTC TTGCAGTCTC
TCTGGTCTGC CGATGGTGAA GATGTACGCA AATTCCAACC TACTCAAGTC TCCAGCGCCC
AGCCGCAAAA GCAAGACTTT GCCTTTGGCC CCGCTACCGC CCAAGCTTCC GGTCCTCGCA
CTTCGTTGCT CACCCAACAA CGATCTCCCG ACTCTGCCTC CCCGACGAGC CCCATCCGAT
TATCTTCCTT CAGTCCCCCG GCCGCTGGTC CAGGCGAGCC ATTCTTGATT CGTAACCTCG
GCGATCCCGG ATCCCCTTCC GCCCGCGCAC TGATTGAACA TGCTCCCGGC CAATCTTTAC
CTGGCGGTCT GGCTAATGCC TTGTCGAGGC TACACCTCCA CGGACCCCGA CCAACGAGCT
CCTTGACGGT GGTCAATCCC GGAGGAGGCG GGAGGGTGGG TGGGGGACTT GGTGCAGAGT
GGAGGTTGGC TGAGCATGAG GCGGAGGGGA GTGAAGATGG GGATGGGGGA GCGACCCCGC
CTAATGGTGC GGGGGTGTCG CATTCCAAGA GGGAAGAACA TGATGAGGGG TTGTTTGCGA
TGGACGGGTA A
 
Protein sequence
MSVPLPSPSP LASAQDGPTG STGDNSNTSA SAKPIPRSRP TPIATAGSPE KASGTPASYK 
YRPGAATSIG KSFNNDNWRD RSPAPSSAMP ATVSGKGSER TVGFEKRDVS SLKGNGGSAL
SREREKEENK ERENEKDKEG KEKSALSHVP CRFFKAGACT AGESCPFSHA APDSAKREVC
QWFLKGNCKF GHKCALAHVR PGEPMSMDRK NKKAAQLEAR ERSGEVTTNG TRKATPTAIP
SASEESGASP VPIRSALSSS IQSNSTRIGS SPMREPFGPP SGALPNSPPA GFAHSYTRGH
PAFASSPNRP SPLSASFGAV GSGLASGSVP GPLSLKPGSN VLSSLRPPVT AAPTFSSSFS
HSSLAIERPS NAVATPLSAS FAGEAPPLHR SIWARSDQPA EPLSPRRPIP RTIKPEAVFE
DDDDHGEEFL PSSLSDLLTP QERARRMSRR DSQDSSYSPS LAAFAAQAPV WGGERLAQSA
GPTMGQKGFL QSLWSADGED VRKFQPTQVS SAQPQKQDFA FGPATAQASG PRTSLLTQQR
SPDSASPTSP IRLSSFSPPA AGPGEPFLIR NLGDPGSPSA RALIEHAPGQ SLPGGLANAL
SRLHLHGPRP TSSLTVVNPG GGGRVGGGLG AEWRLAEHEA EGSEDGDGGA TPPNGAGVSH
SKREEHDEGL FAMDG