Gene CNC06530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNC06530 
Symbol 
ID3256432 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006685 
Strand
Start bp1912569 
End bp1914423 
Gene Length1855 bp 
Protein Length378 aa 
Translation table 
GC content47% 
IMG OID638255872 
Productconserved hypothetical protein 
Protein accessionXP_569908 
Protein GI58265504 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GCAAATACTC GTAAAACGCA CCACTATCCG ATCATTGGTA TCAAAGTTCC GAGGAGCTTG 
TCTCCACTTC TCCCATGCCC TCATTCACGA CTTCCAGCTC TCCTCAAATA CCCGCGCACT
CCACAAAACT TCACCGTCAC TCTGTCCAGG ACGAAGCGTC AGAATTCGCC GTAGCAACAT
CTAGTTCGAC ATATGCCATC GCTGAAGAAG AGTTTGAAAG TGAATCTGAA GAGAGGACGT
TGAGAGGGAG GTTGAGGGAC ATCATGTCAG ATAATCAGAT GGTGATCAAC ACGTTTATTG
CGGGTACGTT TATGCTGGGG ATACAAGAAA AACCGGAGAT AAAGCTCATA AACAACTTAG
GCGGGCTTGC TGGAGCTGCT AGCAGAACGG TTGTTAGTCC TCTGGAAAGA CTGAAGATTA
TTCTGTGCGC CTGATCTTAT TGCCTTGCGT ATGTATTTTC GCTGACTTCT TACTAGCCAA
GTACAGGCAT CTGGTAGCAA ATCTGGTGTT GGGCAAGCGT ACGCTGGAGT TTGGGAGTCC
TTGGGACGGA TGTGGAAGGA CGAGGGCTGG AGAGGGTTCA TGAGGGGTAA CGGCATCAAC
GTTGTCCGAG TGAGTTTTGT TTCTGCGTTC CAACTGTCAC GTCATTCCCT AGACAGTAAA
CTGATCGAGT GACCGATGTC AGATATTACC ATACTCGGCT TTACAATTCA CAGTGAGCTA
GCCCTGGCAT GAATTGGCAT GGGATGATGG CTCACCCAGC ATTTAAGTCG TATGGAGCAT
TCAAGGGTGT CTTATCGACA TGGTCTGGCC AAGAGGCGCT CTCAACACCG TTGCGCTTGA
CAGCAGGTGC AGGTGCAGGT GTCGTTGCTG TTGGTGCGTT GCGCTGTCAT ACTAGACTTG
ACTCGACTTG TCAAAACCTG GGGTATAGAC TAGACACTGA CCGTTGCCTG TAGTTGCCAC
ATATCCTCTA GATCTCGTTC GAGCTCGGTT ATCCATCGCA ACGGCGAACA TGGCAGTTCG
TCAGCCTGGA GCAGCGTTCA CAAATGAAGA CGCAAGATTA GGTATAGTCG GTATGACCAA
GAAAGTGTAT AAGGCCGAGG GGGGGTTAAG AGGCCTGTAG TAAGTCCTCA CTCGCCATTG
GTATCTTTGA GAGTAATAAT AACTGTTGCG CACGAACAGT CGAGGTTGTT GGGCCACAGC
TTTAGGAGTG GCGCCTTACG TGTCGCTGAA CTGTGAGTCT TGAAATAATT TTACAGCACA
TGGTTACAAA CTAATACTTT CCCAGTTTTC TTCTATGAAT CCGGTAAGCT CACTACTACC
CGCCTTTCCT CCTTTTTTTT CCCACACTAA CTATTCTTCC CAGTCAAAAC CCACGTCCTT
CCTGATCCGC CTTCCCCCCC ATTATCAGAA ACGGACCTCG CTCTCCGTAA ACTCTTCTGC
GGCGCCGTCT CTGGCGCCTC TTCCCTCATC TTCACCCACC CCTTTGACGT GTTGAGAAGA
AAGCTGCAGG TGGCCGGCTT GTCTACCCTC ACTCCGCATT ATGATGGAGC AATCGATGCT
ATGAGGCAGA TAATAAGGAA TGAAGGTTTT TGGAAGGGGA TGTAGTAAGT CCATTAGACA
TCTTTATGAT TGTCAAGGAG GATAGTTGAT GTGCGCTTGT CTAGTCGTGG ATTGACACCT
AATTTGATCA AAGTGACACC ATCGATCGCA GTTTCGTTTT ACGTCTTTGA GCTTGTTCGG
GATTCTTTAG AAGCTTTATA ACTTTGGGAA AAACAAAAAG GTGGTACTTT TTTACTTTCG
ATCTAGCATA TTTTCATCGT TTATTTTGCA TATGCATACT GCATGAATTT CCATT
 
Protein sequence
MPSFTTSSSP QIPAHSTKLH RHSVQDEASE FAVATSSSTY AIAEEEFESE SEERTLRGRL 
RDIMSDNQMV INTFIAGGLA GAASRTVVSP LERLKIILQV QASGSKSGVG QAYAGVWESL
GRMWKDEGWR GFMRGNGINV VRILPYSALQ FTSYGAFKGV LSTWSGQEAL STPLRLTAGA
GAGVVAVVAT YPLDLVRARL SIATANMAVR QPGAAFTNED ARLGIVGMTK KVYKAEGGLR
GLYRGCWATA LGVAPYVSLN FFFYESVKTH VLPDPPSPPL SETDLALRKL FCGAVSGASS
LIFTHPFDVL RRKLQVAGLS TLTPHYDGAI DAMRQIIRNE GFWKGMYRGL TPNLIKVTPS
IAVSFYVFEL VRDSLEAL