| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNC06460 |
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| Symbol | |
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| ID | 3256118 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006685 |
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| Strand | - |
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| Start bp | 1878465 |
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| End bp | 1881351 |
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| Gene Length | 2887 bp |
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| Protein Length | 625 aa |
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| Translation table | |
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| GC content | 50% |
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| IMG OID | 638255865 |
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| Product | RNA helicase, putative |
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| Protein accession | XP_569901 |
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| Protein GI | 58265490 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ACTTATTCTA CCCGCAAGTC TACTCAGCTA CCAGCCAGGG CCACAGCTGC TTATACGCCC
AGCTCCGCGA ATAGAGTCAT CCGCTACCGA CTACATCCCG TAACAACACT CTTGCAACCC
GCTATACATT GCTACGTACC GCCATCAATC GATATCGGCC GTTTCAGCCC ACTTAACTAC
AATTCACAAC ACCACAGCGC TGGACCAGCC TCTCTCATTA AGCTAAATCC TCCTTAACCG
ACTAATCGTT TACTCTGCTA TCTACTATGG CGTCTTCCTC AACGTAAGCT GTTACTTTGG
AATACCAGCA AGGCTGACTG TAGGCTTAGG TTACTGAACG ACGACTGGAA ACAGGGTCTT
GCTGCCCCTC CTAAAGACCT TCGTCCCCAA ACTGAGGTCT GTCCGGGCGC CAACACGTCA
ATCTCACACA ACTAATGATT GCACCAGGAC GTTACCGCTA CTCAAGGATC TCGTTTCGAA
GATTTTGGCT TACGCCGAGA ACTTTTGATG GGTATCTACA CTGCTGGGTT CGAAAGACCT
AGTCCTATCC AAGAGCAAGC TATCCCTATG GCCCTTACAG GACGAGATAT TCTTGGTGGG
TTTAGGTTTC AGCGTCTGGA GCTGCGGCTT ACGGGTATGA CATAGCTCGA GCGAAGAACG
GTACTGGAAA GGTGAGTAGC CGGGGCACTT TTTGATGACT TGGACTGAAT GTCAACTCAG
ACTGCTTCTT TCATTATTCC TACCCTTAAC CGAATCAACA CTTCTCTATC TCATATTCAA
GCACTTATCC TAGTTCCCAC CCGAGAACTC GCCCTTCAAA CATCCCAAGT CTGCAAAACC
CTTGGTGCTC ACATCCCTAA CCTCCAAGTT ATGATTACCA CCGGCGGTAC CACATTACGT
GACGATATCC TTCGTCTTCA ACAACCTGTC CACATTCTCG TCGGTACACC CGGTCGTATC
TTAGATTTGG GAAGCAAGGG AATTGCGAGT TTGAACAAGT GCGGTGTCTT TGTTATGGAT
GAAGCAGACA AGCTTCTCAG TGAAGATTTC ATGCCTGTCA TTGAGCAGAC TTTGGCTCTG
TGCCCTCAAG AGAGACAGGT TATGCTGTTC TCTGCTACTT TCCCATGGAC CGTCAAGGAA
TTCAAGGTAG GTTTTGAATC TTCATTTCCC GTTGCCGCTG ACCAGCTTTA GGACCAACAC
ATGGTTCAAC CATACGAAAT CAACCTCATG GACGAACTTA CTCTTAAAGG TGTCACTCAA
TATTATGCCT ATGTTGAAGA ATCTCAGAAA GTCCATTGCC TCAACACCCT CTTCTCTAAG
GTATGCCCCA GACTTTTGGC AGCTCGAATT GGGCCTGACT ATTCTTAGCT CCAAATCAAC
CAATCTATCA TCTTCTGCAA CTCCACCAAC CGTGTCGAGC TCCTCGCCAA GAAGGTCACT
GAACTTGGCT ATTCCTGTTT CTACTCCCAC GCAAAGATGC AACAAGCCCA CCGAAACCGA
GTTTTCCACG ACTTCCGTAA CGGCATGACT CGAAACTTGG TCTGTTCCGA CTTGTTGACA
AGAGGTATTG ATATCCAGGC CGTGAATGTT GTCATCAACT TTGACTTCCC AAGGACTGCA
GAATCATATC TTCACAGGAT CGGCCGATCT GGTCGTTTTG GTCATTTGGG TCTTGCCATT
TCTCTCCTCA CTGTATGCTT GAAACTTCGC ATTATACTGT CTTTGTGCTG ATGTCCTATC
TTAGCTTGAA GATAGACATA ACCTGTACCG TATCGAATCC GAACTTGGCA CAGAAATTGC
CCCTATCCCC GCCGTCATCG ATCCTGTCCT CTATGTCGCT CCTGCCATGG TAGAGGAAGA
GCGAGAATCA CCGCCCCCTA AGCCCGCTGC CATCGCCGCT CCTCCCGCTC AGCAACAACC
TCAACAACGA CAACGACAAC ACCCTCCTGT GCCTTCCCAC CAAGCTGCTC AGCAGAGCCC
TGCTGCCGCG CCCGTCCAAC AACAACAGCA GCAGCAACAA CAACAACAAC AACAACAACA
ACAACAACAA CCTCAGTACC AACAGGCATA TGGTCAGGGC CCACCCCAGC CTCAAGCCCT
TTTCCAGCAG CAGCCCAATT CTTCTCCCGC CCCGGCACCT TTGCCTTCTT ATTCTCAACA
GGCTCCGACT CAGGCCCAGG GACCCGCGCC AGTGCAATCT CCACCTCCCG CGCCTTCCAC
TCAGCCCCAG GCCCCTGCTC AAACCCCCAT TCAAGGCCAA ATCCCTCCGA CTCAGCCCCG
AGCTCAGCAA CAAGGCCAGC AACAACCCGG TCAACCAGGT CAGGCGCAGG GTCAGAGTCA
ACCTAACAGA CGGCCGAATA CTGGTGGCTT TAGGGGTAAC GGACGAGGTC AAGGACATAG
AGGACGAGGT AGGGGGAGGG GAGGACAGCC CGGTCAGCCT GGTGCCGGTG CCGGTGCGGG
CCAGAGCCAA CAGGCTCAAG CCTAAGCGGC GTAAGGCAGG TGTAGTATAA TAAAAGGAGG
AGCGGGAGGG GTGCGACATG AAAAAAAGGA AGTAATGATG GCAGATGAAA GGGAAGCCGT
CGCTATTAAG AGGTATATAC ATCAAGAAGA AGTAGAAGAT GATAAGGGAA ATAGGGTGAA
GGACGTGATT GGAACCTAAG AAATTCAACC TTCTTCAGTG GTAAAAGCAA GGCCACGCGG
AATATCACAC GGATCGCCGC TGTTTTCTCA ACAAAATCAG CGGTAGCAGA AGTCGAATGA
TAGGAAAGAA ATTAAGAAAT GGGAAGTGGG AAGCGGTATG GAGGAGAGGG AATAGGGGAT
GAAGCACGGG TGGAGGAAGT TTTTTTTTTC TTCCTTGAAT TCATTGTAAG CAGCGTGGAA
GCCCCTC
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| Protein sequence | MASSSTLLND DWKQGLAAPP KDLRPQTEDV TATQGSRFED FGLRRELLMG IYTAGFERPS
PIQEQAIPMA LTGRDILARA KNGTGKTASF IIPTLNRINT SLSHIQALIL VPTRELALQT
SQVCKTLGAH IPNLQVMITT GGTTLRDDIL RLQQPVHILV GTPGRILDLG SKGIASLNKC
GVFVMDEADK LLSEDFMPVI EQTLALCPQE RQVMLFSATF PWTVKEFKDQ HMVQPYEINL
MDELTLKGVT QYYAYVEESQ KVHCLNTLFS KLQINQSIIF CNSTNRVELL AKKVTELGYS
CFYSHAKMQQ AHRNRVFHDF RNGMTRNLVC SDLLTRGIDI QAVNVVINFD FPRTAESYLH
RIGRSGRFGH LGLAISLLTL EDRHNLYRIE SELGTEIAPI PAVIDPVLYV APAMVEEERE
SPPPKPAAIA APPAQQQPQQ RQRQHPPVPS HQAAQQSPAA APVQQQQQQQ QQQQQQQQQQ
QPQYQQAYGQ GPPQPQALFQ QQPNSSPAPA PLPSYSQQAP TQAQGPAPVQ SPPPAPSTQP
QAPAQTPIQG QIPPTQPRAQ QQGQQQPGQP GQAQGQSQPN RRPNTGGFRG NGRGQGHRGR
GRGRGGQPGQ PGAGAGAGQS QQAQA
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