Gene CNC06360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNC06360 
Symbol 
ID3256771 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006685 
Strand
Start bp1850209 
End bp1851827 
Gene Length1619 bp 
Protein Length396 aa 
Translation table 
GC content47% 
IMG OID638255855 
Productconserved hypothetical protein 
Protein accessionXP_569893 
Protein GI58265474 
COG category[J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair 
COG ID[COG0513] Superfamily II DNA and RNA helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATCACGAATA AACATGGCTG GTGTTAATGT GTAAGTACGT AGTCATTCTG TCCAGCTACC 
AGCTTACATC TAGTAGTGGC GACGACAAGC TCGTATTCGA GTCTTCCGAA GCCGTCACGG
TCGTACGTAT ATAAACTCTG ATGTTTCTTC GAGAGGTTCA GGAGTGCTCA TAAGACGAAC
ACTTTTGTTC CTCTCGACTT TAGGCTCCTA CCTGTGAGTA CAACTTAATC AATCCTTGTA
AACAAATGCT GATGATTTTC CTATACAGTC GAGGCTCTCA ACTTGAAAGA AGATCTCTTG
CGCGGAATTT ATGCTTACAA CTTTGAGAAA CCTTCCGCCA TCCAGCAACG TGCGATCATC
CCCATCATCC GTGGTCGAGA TGTTATTGCC CAAGCCCAGT CTGGTACGGG TAAAACCGCC
ACCTTTTCTA TCTCAATGCT TCAGTCCATC GACACCAACT TGCGCGAGAC TCAGGCTTTG
GTTCTGTCCC CCACAAGGGA ATTGGCTGTA CAGATCCAAA CCGTCGTTCT CGCTCTCGGT
GACTACATGA ACGTCTCTTG TCATGCTTGT ATTGGAGGAA CCAGCGTTGG TGAAGACATT
AGGAAGCTTG AGGCTGGGCA GCAGGTTGTC AGTGGTACTC CTGGACGAGT GTTTGACATG
ATCCGAAGGA GAAACTTGAG GACTAAGGAC ATCAAGGTGC GTCTACGTCT TGTCAGAAGT
ACGGTAAAGC TGATGCATCT CAGATGCTCA TTCTCGATGA GTCTGATGAA CTCCTCAACA
AAGGTTTCAA GGACCAAATT TACGACATCT ACCGATACCT CCCTCCCGCC ACCCAAGTTG
TCGTTGTCTC CGCGACCCTC CCTCATGACG TCCTCGAAAT GACTACCAAG TTCATGACAG
ACCCTGTCCG AATTCTCGTC AAGCGTGATG AATTGACTCT TGAAGGAATC AAGCAATTCT
TCGTCGCCGT CGAAAAGGAA GACTGGAAGT TTGACACGCT TTGTGATTTG TACGACACTT
TGACGATTAC GCAGGCGGTC ATTTTCTGTA ACACCCGACG CAAGGTCGAC TGGTTGACAG
AAAAGATGCG AGAGGCGAAC TTTACTGTCA GCAGTATGCA CGGAGAAATG GTACAAAAGG
AACGAGATGC GATCATGGCC GAATTCCGAG GGGGACAGAG GTAGGTTCAT TTAGTACCGT
GTGATCTGAA CTAGCATCGT CTCTGACTCG ACGACCTGCA GTCGAGTATT AATTACCACC
GACGTCTGGG CCCGAGGTAT CGACGTCCAG CAAGTTTCTC TAGTCATCAA CTACGACCTT
CCTACTTCTC GTGAAAACTA CTTGCACAGA ATAGGTCGAA GTGGTCGATT CGGCAGGAAA
GGTGTGGCGA TCAACTTTGT CACTGTTGAT GATGTCAGGA TTTTGAGAGA TATTGAGCAA
TATTACTCTA CTCGTTAGTT GAAGCATCTG AACATCTGGG TGTAGGAGCT AATTGTTTCT
TAGAAATCGA CGAAATGCCT ATGAACGTTG CGGAGCTCAC ATAAAAAAAC AAGAAATGAA
GTTTCGGTTC GATAGCTTTG ATGGTTGTTA TTTATTATTT AAAATGCATT AACGTCTCG
 
Protein sequence
MAGVNVGDDK LVFESSEAVT VAPTFEALNL KEDLLRGIYA YNFEKPSAIQ QRAIIPIIRG 
RDVIAQAQSG TGKTATFSIS MLQSIDTNLR ETQALVLSPT RELAVQIQTV VLALGDYMNV
SCHACIGGTS VGEDIRKLEA GQQVVSGTPG RVFDMIRRRN LRTKDIKMLI LDESDELLNK
GFKDQIYDIY RYLPPATQVV VVSATLPHDV LEMTTKFMTD PVRILVKRDE LTLEGIKQFF
VAVEKEDWKF DTLCDLYDTL TITQAVIFCN TRRKVDWLTE KMREANFTVS SMHGEMVQKE
RDAIMAEFRG GQSRVLITTD VWARGIDVQQ VSLVINYDLP TSRENYLHRI GRSGRFGRKG
VAINFVTVDD VRILRDIEQY YSTQIDEMPM NVAELT