Gene CNC06280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNC06280 
Symbol 
ID3256321 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006685 
Strand
Start bp1834098 
End bp1835520 
Gene Length1423 bp 
Protein Length149 aa 
Translation table 
GC content45% 
IMG OID638255847 
Productconserved hypothetical protein 
Protein accessionXP_569886 
Protein GI58265460 
COG category[D] Cell cycle control, cell division, chromosome partitioning
[R] General function prediction only
[T] Signal transduction mechanisms
[Z] Cytoskeleton 
COG ID[COG5126] Ca2+-binding protein (EF-Hand superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CACGAAACAT CACGAGTAAC AACAACCTAC ATAACTTACG ATGGCTGAAC AACTTGTGAG 
TATACCTTCC CATTGCAACA CCCTGCCGAT GGCGTCGCAT ACACTCCCCC TGTTCTCCGC
GACACAAGTG AACGGTTGCT GATGGATTCG TCTACATGAC CTCTGTAGAC TAAGGGTAAG
CTTTTATACC GCCACTTTGG AAAGGGATGC TGTGGGCGAT TATACTGATC ATTATGGGCA
TTCCCTACAG AACAAATTGC TGGTACGCAT ATCTGCCTAT TTTTAGCACA CTCTTTTCAT
TAACTGATTC ACATGTGATA GAATTCAAAG AGGCTTTCTC TTTGTTCGAT AAGGGTGCGC
AATAACCATT GGAGTACTTT TGGAGTAATA CTGACTCAAA GGATATCTCT TTCATCTTGC
ACTTTTCATG TTCTTTCTTC ACCTCTTTAA CTCTCCCCGC CCCATTGATC CCTTTACCAT
ATTGCACCTC GTTACCTATG GTCTACCACA GACGGAGATG GAACTATCAC TACCAAGGAG
CTCGGTACCG TTATGCGATC TCTCGGCCAG AACCCTACTC AAGCTGAGCT TGAAGACATG
ATCAACGAGG TGTGTCTTTG GTCCCTCTTC AAAGCTGTAC TCGGGACGAG TTTTAGTCGT
CGCAATGGGC AATGGCGTCT GTAACAAACA TGTTTGAGAG CTAATCTGAC TTTGAATAAC
TATTAGGTTG ATGCCGATGG AAACAACTCT ATCGATTTTG CCGAATTCAT GACTCTTATG
GCTAGGAAGA TGCACGACAC CGACTCCGAG GAGGAGATCC GAGAAGCCTT CAAGGTGAGA
TTCGTATCAG CCCAGCGTCC AAGGAGACGA AAAAGATGAA TGTTAAGTTG ACGACTCTCG
CTCGAATAGG TTTTCGACAA GAACAACGAC GGTCATATTT CTGCTGCCGA GTTGAAGCAC
GTCATGAGTA AGTTGATGCA AACGAGGTTT GGAAAGAAAG TTTCTGCAGG CCTTTATGCT
AATGATGTGG TATAGCCAAT CTTGGTGAGA AGCTCACAGA CGCTGAGATC AGCGAAATGA
TTCGAGAGGC AGACAAGGAC GGTGAGGATA TTGTGTCGGA CGTGGTACGA TCAATGCGAA
AGTCTGACTT TTACATGTTC AGGTGACGGA ATGATCGACT ACAACGAGTT TGTTACTATG
ATGATCGCCA AAGTAAGCCT GCTTCGCTCT TTTGATTAGT ACAGTACCCA ACTGATCGTC
TTTGTTAGTA AATGTCTTTA TCAACATTCT GGGTCCTCTT GTCATTACTT GTCCTGATTG
GCGCTGCACG TTGGGATGCG AGAATGCGAT ATGAAGAGGT GGATGGAGTG AAAAGGAAAC
ATTCAAATGT ATATTGGAAA CAATGAATCC CGATGATATC CTG
 
Protein sequence
MAEQLTKEQI AEFKEAFSLF DKDGDGTITT KELGTVMRSL GQNPTQAELE DMINEVDADG 
NNSIDFAEFM TLMARKMHDT DSEEEIREAF KVFDKNNDGH ISAAELKHVM TNLGEKLTDA
EISEMIREAD KDGDGMIDYN EFVTMMIAK