Gene CNC06140 details

Gene Information

• Locus tag: CNC06140
• ID: 3256583
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006685
• Strand: -
• Start bp: 1798790
• End bp: 1801020
• Gene Length: 2231 bp
• Protein Length: 608 aa
• GC content: 50%
• IMG OID: 638255834
• Product: SWI/SNF-related matrix associated protein, putative
• Protein accession: XP_569875
• Protein GI: 58265438

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CATCTCTCCC GTCTACGAAA TGGCGTACCC AACGCGTACA CGGGTATCCA CCCCGTCCAT 
CCAAAACTCC TACACAAACC GGACTTCTTA TACCTCGACA CGCCCAGCTC CATCTCCGGC 
CCCAGTGCCA GTCCTCTCCC ATCAAGCAGC CGTATACCAA CATCCTCAGA CATACCCTCC 
CGGACCATGT CCCTTCTTCC TCCCTCCACC AGGCCAAAAG ACAACTGACC CATCGCTGTC 
TACTCAACCC ACTACCCAAG CGCTTTACAC GACTTATCCG TCAAGGTTGA GGACCGGAGT 
GACCGGGCTG ATACAACCTG AGCGCGTATC GGGCGGGCCA AAGGAGAGGA AAGCGTTCTT 
GGCAGAGTTG GATAGGGAGA TGCCTTTTGG CGGGGGCGTC AGTACGCCAG GATATGGTAG 
ATTTTCAGGC AGTGGAACGA GCACCCCGCG ATTCGACTCG CCCGCTCCCT TTCCCTCCTC 
TAGACGCATG ACGGCCGCTT CAGCAGCAAC TGGGGCAGGA CTCGGATCAA GTAGAAGGGG 
AAGGGTGGTG AACTATGCCG AAAAGGCGTC AGATGATGAA GATTTTTCGG AAGAGGAGGA 
TGATTTTGGG GAAGCGGCTT CTGATCCGGA TGATGTAGAT TACGGTTCAC GGCGAAGGCG 
CGCTGCCGGA GGAGGGAGTC GGAAGGAAAG CGCGGCGCCG TTAGTTGTGG GTGGGCTTGA 
ACATCAAGCG GCCATGAGGG CGGGGAAATT GAGACGGAAA ATGGAGGAAT TGGATAGGGG 
ATGGACGTGG TTGGGCGATA GGACCCCTGG AGATAGGGTG AGGAGCCAGG TTGCAGGTGT 
GACCAAGCAT GTTTACAAGT GCGTCCCTTT TCTCCCAGGA GAAATACTCA GGAATCGTGG 
TTGACAAGAA CCTGTTTTTC TTTTTCTCTT TTCAACAGGT CAGAAGATGA ATTGCAAAAA 
GAAGCCGAAC GGCCCGAGAT GCTTATCCCC ATAACCATCG ATTTTGACGT CCAATCTACC 
CATCCCGATC AACAAGGACT GAAAATCCGA GATCGTTTCC TATGGAATCT GAACGAACCG 
TTCATCACTC CTTACCAATT CTCAATCATC TTTTGCGAAG ATATCGGGAT CCCAATCTCG 
CCTTATGCGC AAAGAATCCA AGATTTAATT GAAAAACAGA TTGAGGAGAA TCAGAATGCG 
GCGGAAATTG ATGTAACGAA TGAAGAGGTG ACGGAGAATG ATGTAGTCTG GAGTGATGAA 
GAGGTTGAGG GAGTCATGGA TGATGCAGTT GAAAATGGAG ATGGGATAAA AGGTGGAGAT 
GATGAATCCA AGGAACGACA AGTGGAAGAG GAGCAAGAGC AAGAACAAGG GCAAGATGAG 
AAAGAGGACA AGGAGAGATC GAGAAAGAGG AAGAGGGAGA GGGAAGAAAA AGACGACAAG 
GAGCGAAATT GGGCAGAGCC CGATTGCCGT ATCATCGTCA ACGTGAGTTT ACTTCTCATC 
ATATCTTCCA CTACCTCAAT GGAAGAACTA AAACATGCCA TCAGCTTGAC GTCCAAATCT 
ACTCTTACCT CCTGCGCGAC CGCATCGAAT GGGACCTTTC TTCTCCCCTT CCACCATCCC 
TTTTCGCCAA ACATTACTGC ACCGAACTCG GCCTCACCGG CGAAGCCATC CCTGCCATCA 
CATGTGCCAT CACCGAAGAA CTCTTGAAAC ATAAACGTGA CGCGCTCGAT CTCGACCTTT 
TTGCAGCTAC ACACCCTGTC GAACAAGCCA AGTGGGAAAA GGGAACAGCA CAGCCGAGGG 
TGAATGTGAA CCAAAAAGGG GGAGCGAAAG CGTTGGTAGG TGTTTGGAGG GATTGGTGGG 
AGCGAGAAGA GTTTGGGCCG GTTTTGGTAG AGTTGACGAT GGAGGAGATG GAGAAGAGGG 
ATATGGAGAG AACGAGGGAG GTAAGGAGGA ATAATAGAGC TGGAGCGCCT TTGAAGAGAA 
GAAGGTGAAA AAGTAAAGTA GGCATTAAAG TGTTTAATTT TTTGGTTTCG CTTTGGGTCT 
CTGAATACAC ATGTCGTTCC CTTATTACTC TTCCTTTTTT TGCTTGCGTC GTATCGCCCG 
AATCGTGATG TTTTTTCCCC CCCAAACAGT CAGTTCCTTT GTCCATTATA TATCGGTAGC 
CACTTTATCA ACCAAGTTAG CTTCTGATCA TTGTAAATGA TTGGATCGTA GACTACAATT 
GAAAAGTAGC G 

 

Protein sequence

MAYPTRTRVS TPSIQNSYTN RTSYTSTRPA PSPAPVPVLS HQAAVYQHPQ TYPPGPCPFF 
LPPPGQKTTD PSLSTQPTTQ ALYTTYPSRL RTGVTGLIQP ERVSGGPKER KAFLAELDRE 
MPFGGGVSTP GYGRFSGSGT STPRFDSPAP FPSSRRMTAA SAATGAGLGS SRRGRVVNYA 
EKASDDEDFS EEEDDFGEAA SDPDDVDYGS RRRRAAGGGS RKESAAPLVV GGLEHQAAMR 
AGKLRRKMEE LDRGWTWLGD RTPGDRVRSQ VAGVTKHVYK SEDELQKEAE RPEMLIPITI 
DFDVQSTHPD QQGLKIRDRF LWNLNEPFIT PYQFSIIFCE DIGIPISPYA QRIQDLIEKQ 
IEENQNAAEI DVTNEEVTEN DVVWSDEEVE GVMDDAVENG DGIKGGDDES KERQVEEEQE 
QEQGQDEKED KERSRKRKRE REEKDDKERN WAEPDCRIIV NLDVQIYSYL LRDRIEWDLS 
SPLPPSLFAK HYCTELGLTG EAIPAITCAI TEELLKHKRD ALDLDLFAAT HPVEQAKWEK 
GTAQPRVNVN QKGGAKALVG VWRDWWEREE FGPVLVELTM EEMEKRDMER TREVRRNNRA 
GAPLKRRR