Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNC06000 |
Symbol | |
ID | 3256481 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006685 |
Strand | - |
Start bp | 1769989 |
End bp | 1773187 |
Gene Length | 3199 bp |
Protein Length | 708 aa |
Translation table | |
GC content | 46% |
IMG OID | 638255821 |
Product | actin cross-linking, putative |
Protein accession | XP_569979 |
Protein GI | 58265646 |
COG category | [Z] Cytoskeleton |
COG ID | [COG5069] Ca2+-binding actin-bundling protein fimbrin/plastin (EF-Hand superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTTTTGCAGT GTCATTTCCA AAACTTCTTC CGATCTTCAT CAGCATATCT TCCCAAAGAT GTGGTCCCCT CAAGTTGACA TGGAACGTCG CGCGTCCCAA CAATCAGCCC TCTCACCAAC CCCTCCAACA AATAAACATG GCCGTACAAA GTCTCTCAGC GCAATATCCA ACTTCAACGC CGCGATGAAC ATCAACGCCG GAGGACCTGG CGGGGGTGCA CCGATGAGCC CTGTCCGCAT GGGCAGTCCT TTGATAGGAC CCGGGGGAGC AGTCGAGTTT GAATGGGCAG ATATTCAAGC AAGGTCAGTG GTGGATGTTG GGTTACGACG ATGAAATAGT CGTTGATGCT GCTGCTGATC ATCTTGGTAA CAGGACTTTT TGTCGATGGT GTGTACACTG TACAGAAACG TTATGGGCAA TAGATCTGAT TGCTATGTAA GGCTCAACAA ACAGCTGGAA AGTCACGGAT TAGAACCGAT GACAGACGTT GTCAAGGACT TTTCGAGCGG TGTCAAGCTC ATTCAAGTAA GTCCTGCTCA AGATGATTCT ACAGCTACAT AGGCTAACAA AATAACTTTA AGCTCCTAGT CAGTGGACAT TTACTTCAGA GGCTTGCAAA ACATCATCTA ACAAATCGGA ATCATGTAGG AAATCATCTC GGAGGAAAGC TTGGGGCGCT ATGTTAAGAA CCCGAGGCTG CGTGTGCAAA AAGCCGAGGT AGGCTACCAA AGAACTTATA CCTGCAGGCA ATATCGTAAC AAATATCATT CTTAGAATGC TGCAAAAGCC CTGAATTTTA TACGGTCAAA AGGAATTAAA TTGACGAATA TCGGTCCGGA AGATATCGTT GACGGAAACC TGAAGCTTAT CCTGGGCATG GTATGTTGTT GTCAGATCAT CTCTCGTGGA TTAAGGCAAT TTGGGGACTG ATAATGGCAA TCAGATATGG ACGCTTATTC TGAGATTCAC AATCGCAAAC ATCACGTAGG CTCTTGGTAA CCTCCTTAAC AACTAAAAAA GATGGCTAAT GCATTTTTTA GAGAATCTGG ATTATCGGCA AGGGATGGTC TGTTGCTCTG GTGCCAAAGA AAGACAACTG GCTATAACCC GGAGGTGGAT GTACAAAACT TCAAAGGAAG TTTTGCAGAT GGTCTAGCTT TGTGAGAATC AATTTGGTCA GGCAAGGGGT GGGTGACTGA CTTGCACTGC AGATGTGCTC TGATTCATTA CCACCGCCCG GAGCTGCTAG ATTATCATGG GTTGGATAAG GCTGACAAGC GAAACAACAC TGAACTTGCT TTCAAAGTTG CTGAAGAAAA GCTTGGTATC CCTGTAAGAT TCAATTCTCA CATATACACC GCTCATAGCT GACAGAGTTC CTTTATAGCG TCTGCTTGAA GTGAAGGATT TGTGCGATGT GGAAGTCCCA GACGAAAGGT CTGTAATGAC TTACGTTGCT GAATTTTTCC ACAAGTTCTC AAGCGAAGGT GTGTCATAAG CCGCAGCAAT AGAATATAGC GAGTCGCCAA CTCATAATAA TTATTCATCA CAGACAAAGC CGAAACCGGC GCTAGGCGAG TCGAAAAGTT TGCGGAGGTG ATGCAAGGCG TCTGGTGAGT GTCCAATCTT AGGTAACGAA TTCTCGCCCT AACACTGGCA TCCAGGGCCA ATAAAAATGA TTTTGAGCGC CGTCTGGACC TCCTTCTTTC CGCGCTTTCT GTCACCGAAC AGTCCTGGTT CATCGCGCCT CAACCCTCAA CATACCCGGA AGCAATCTCA TACCTTGCCC AATTCAATGA TTACAAACGC ACCTCTAAAC GGGAATGGGT AAAGGAGCGA CAAGAGCTTG CTGCGTTGTA CAGTAATATC CAGACAAAGA TCAGAACGTA TTCTTTAAAA CCTTGGGAAC CGAGTGAAGG GGCTAGATTG GAGGTAAATC GGTCTGACTA ATGTGGGAAT GGCTACTGAT TGGTTTATAC AGGATCTGGA GAAGAGATGG GCAGAGTTTT TGGTGTCGGA GACTGCAAGA AGTCGTGCTA TAAATGCCTC TGTAAGAGAG TAGGTTTTTA TTTTATTTTT TACTTTCTGC TCGTCCGTTG CAGTGAGTTA CGTACTGACA GGGTGCAGTA TTAAAGAGAC TTTGAAAAAG AAATTTGCGA GAGCGGCAGA GGACTTCATC CATCGCTTAC AGCAGATTGA ACAGGCGATC GGCGCCTTGG CCGGACCTTT ACCAGTGAGT ATTGGTTTTC TTTGTCAGTT ACCTCTGTTC AGCTGTACTT ATCGTACACG TATAGCAACA AAAGCAGACT CTTTCTCAAC TATCATCCTC CATACCATCT CTTTACAAGT TGTTATCGAC AGAAATATCA GATCTCAACA ACAGCTGTCT CGAAGCCAAG GTAGAAGAGA ATGACTATAC TGTTTTGACT GTGGATGATC TCGAGTACGA GTTGGAGCTG GCTGAGGTGG GATTAAAAAA GAAGATCGCA TTCATAGATA ACCAAGTCAG TCGGTTCTGG AGACAAGAGA AAATTATGCT TATGATGCTA CAGCTGGTCT CTGCCCAACA CACCAATATC ACACCCGCCA AATTAGAAGA GTTTGAGGCG ACGTTTAAGC ATTTTGCATG GGAGGAGACA AATGCAAGTG ATGTTTCATC TTTGTGGGAG ACCCAGCTGA TGACGAGTAT AACAGACCCT CGGAATGTGG GAGATGCATT CAGCCTTGGC GAGTTTAGGT ATCGTCTACG CTGTAGGTGT TGTGTCCAAC GTATCACCAT GGGCTTACAT TGTTCCATAG GAGGAGGAAC TGGAAACGAT TTTCTCCGAG CTAGAACAAC ACTTTGGCGC TGTCACATAC GAGGCGTGGC TCAGTCTGCT CGTCAACATT ACTCAAGACG ATGCGTCCTC CCCTGAACAA CTGCGCGAAG CTTTCAGAGG CATGGCTGGG GAGAAGCCAT ACGTCACTGA CCTTGATTTT GAGTACGCGC ATTTGCCTAA AGAGACAGTT AGGTTCTTGC AGGAGGCAAT GCCAGAAACG TCTGAGCTGC CCGAGTTGGA AGAAGGGATG GAAAGACCTG CTAATGGTAC CACGAAGGCT TATGACTGTG AGTCAAGTCA GCAGAGCATT GAAGTCACTT GCTTATTTGG GGCAGACAAC TCTTTCTTAG AAGTTGCTTT TGCGCAGCAG TGTATCTGA
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Protein sequence | MWSPQVDMER RASQQSALSP TPPTNKHGRT KSLSAISNFN AAMNINAGGP GGGAPMSPVR MGSPLIGPGG AVEFEWADIQ ARTFCRWLNK QLESHGLEPM TDVVKDFSSG VKLIQLLEII SEESLGRYVK NPRLRVQKAE NAAKALNFIR SKGIKLTNIG PEDIVDGNLK LILGMIWTLI LRFTIANITE SGLSARDGLL LWCQRKTTGY NPEVDVQNFK GSFADGLALC ALIHYHRPEL LDYHGLDKAD KRNNTELAFK VAEEKLGIPR LLEVKDLCDV EVPDERSVMT YVAEFFHKFS SEDKAETGAR RVEKFAEVMQ GVWANKNDFE RRLDLLLSAL SVTEQSWFIA PQPSTYPEAI SYLAQFNDYK RTSKREWVKE RQELAALYSN IQTKIRTYSL KPWEPSEGAR LEDLEKRWAE FLVSETARSR AINASVRDIK ETLKKKFARA AEDFIHRLQQ IEQAIGALAG PLPQQKQTLS QLSSSIPSLY KLLSTEISDL NNSCLEAKVE ENDYTVLTVD DLEYELELAE VGLKKKIAFI DNQLVSAQHT NITPAKLEEF EATFKHFAWE ETNTLGMWEM HSALASLGIV YAEEELETIF SELEQHFGAV TYEAWLSLLV NITQDDASSP EQLREAFRGM AGEKPYVTDL DFEYAHLPKE TVRFLQEAMP ETSELPELEE GMERPANGTT KAYDYNSFLE VAFAQQCI
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