Gene CNC06000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNC06000 
Symbol 
ID3256481 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006685 
Strand
Start bp1769989 
End bp1773187 
Gene Length3199 bp 
Protein Length708 aa 
Translation table 
GC content46% 
IMG OID638255821 
Productactin cross-linking, putative 
Protein accessionXP_569979 
Protein GI58265646 
COG category[Z] Cytoskeleton 
COG ID[COG5069] Ca2+-binding actin-bundling protein fimbrin/plastin (EF-Hand superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTTTTGCAGT GTCATTTCCA AAACTTCTTC CGATCTTCAT CAGCATATCT TCCCAAAGAT 
GTGGTCCCCT CAAGTTGACA TGGAACGTCG CGCGTCCCAA CAATCAGCCC TCTCACCAAC
CCCTCCAACA AATAAACATG GCCGTACAAA GTCTCTCAGC GCAATATCCA ACTTCAACGC
CGCGATGAAC ATCAACGCCG GAGGACCTGG CGGGGGTGCA CCGATGAGCC CTGTCCGCAT
GGGCAGTCCT TTGATAGGAC CCGGGGGAGC AGTCGAGTTT GAATGGGCAG ATATTCAAGC
AAGGTCAGTG GTGGATGTTG GGTTACGACG ATGAAATAGT CGTTGATGCT GCTGCTGATC
ATCTTGGTAA CAGGACTTTT TGTCGATGGT GTGTACACTG TACAGAAACG TTATGGGCAA
TAGATCTGAT TGCTATGTAA GGCTCAACAA ACAGCTGGAA AGTCACGGAT TAGAACCGAT
GACAGACGTT GTCAAGGACT TTTCGAGCGG TGTCAAGCTC ATTCAAGTAA GTCCTGCTCA
AGATGATTCT ACAGCTACAT AGGCTAACAA AATAACTTTA AGCTCCTAGT CAGTGGACAT
TTACTTCAGA GGCTTGCAAA ACATCATCTA ACAAATCGGA ATCATGTAGG AAATCATCTC
GGAGGAAAGC TTGGGGCGCT ATGTTAAGAA CCCGAGGCTG CGTGTGCAAA AAGCCGAGGT
AGGCTACCAA AGAACTTATA CCTGCAGGCA ATATCGTAAC AAATATCATT CTTAGAATGC
TGCAAAAGCC CTGAATTTTA TACGGTCAAA AGGAATTAAA TTGACGAATA TCGGTCCGGA
AGATATCGTT GACGGAAACC TGAAGCTTAT CCTGGGCATG GTATGTTGTT GTCAGATCAT
CTCTCGTGGA TTAAGGCAAT TTGGGGACTG ATAATGGCAA TCAGATATGG ACGCTTATTC
TGAGATTCAC AATCGCAAAC ATCACGTAGG CTCTTGGTAA CCTCCTTAAC AACTAAAAAA
GATGGCTAAT GCATTTTTTA GAGAATCTGG ATTATCGGCA AGGGATGGTC TGTTGCTCTG
GTGCCAAAGA AAGACAACTG GCTATAACCC GGAGGTGGAT GTACAAAACT TCAAAGGAAG
TTTTGCAGAT GGTCTAGCTT TGTGAGAATC AATTTGGTCA GGCAAGGGGT GGGTGACTGA
CTTGCACTGC AGATGTGCTC TGATTCATTA CCACCGCCCG GAGCTGCTAG ATTATCATGG
GTTGGATAAG GCTGACAAGC GAAACAACAC TGAACTTGCT TTCAAAGTTG CTGAAGAAAA
GCTTGGTATC CCTGTAAGAT TCAATTCTCA CATATACACC GCTCATAGCT GACAGAGTTC
CTTTATAGCG TCTGCTTGAA GTGAAGGATT TGTGCGATGT GGAAGTCCCA GACGAAAGGT
CTGTAATGAC TTACGTTGCT GAATTTTTCC ACAAGTTCTC AAGCGAAGGT GTGTCATAAG
CCGCAGCAAT AGAATATAGC GAGTCGCCAA CTCATAATAA TTATTCATCA CAGACAAAGC
CGAAACCGGC GCTAGGCGAG TCGAAAAGTT TGCGGAGGTG ATGCAAGGCG TCTGGTGAGT
GTCCAATCTT AGGTAACGAA TTCTCGCCCT AACACTGGCA TCCAGGGCCA ATAAAAATGA
TTTTGAGCGC CGTCTGGACC TCCTTCTTTC CGCGCTTTCT GTCACCGAAC AGTCCTGGTT
CATCGCGCCT CAACCCTCAA CATACCCGGA AGCAATCTCA TACCTTGCCC AATTCAATGA
TTACAAACGC ACCTCTAAAC GGGAATGGGT AAAGGAGCGA CAAGAGCTTG CTGCGTTGTA
CAGTAATATC CAGACAAAGA TCAGAACGTA TTCTTTAAAA CCTTGGGAAC CGAGTGAAGG
GGCTAGATTG GAGGTAAATC GGTCTGACTA ATGTGGGAAT GGCTACTGAT TGGTTTATAC
AGGATCTGGA GAAGAGATGG GCAGAGTTTT TGGTGTCGGA GACTGCAAGA AGTCGTGCTA
TAAATGCCTC TGTAAGAGAG TAGGTTTTTA TTTTATTTTT TACTTTCTGC TCGTCCGTTG
CAGTGAGTTA CGTACTGACA GGGTGCAGTA TTAAAGAGAC TTTGAAAAAG AAATTTGCGA
GAGCGGCAGA GGACTTCATC CATCGCTTAC AGCAGATTGA ACAGGCGATC GGCGCCTTGG
CCGGACCTTT ACCAGTGAGT ATTGGTTTTC TTTGTCAGTT ACCTCTGTTC AGCTGTACTT
ATCGTACACG TATAGCAACA AAAGCAGACT CTTTCTCAAC TATCATCCTC CATACCATCT
CTTTACAAGT TGTTATCGAC AGAAATATCA GATCTCAACA ACAGCTGTCT CGAAGCCAAG
GTAGAAGAGA ATGACTATAC TGTTTTGACT GTGGATGATC TCGAGTACGA GTTGGAGCTG
GCTGAGGTGG GATTAAAAAA GAAGATCGCA TTCATAGATA ACCAAGTCAG TCGGTTCTGG
AGACAAGAGA AAATTATGCT TATGATGCTA CAGCTGGTCT CTGCCCAACA CACCAATATC
ACACCCGCCA AATTAGAAGA GTTTGAGGCG ACGTTTAAGC ATTTTGCATG GGAGGAGACA
AATGCAAGTG ATGTTTCATC TTTGTGGGAG ACCCAGCTGA TGACGAGTAT AACAGACCCT
CGGAATGTGG GAGATGCATT CAGCCTTGGC GAGTTTAGGT ATCGTCTACG CTGTAGGTGT
TGTGTCCAAC GTATCACCAT GGGCTTACAT TGTTCCATAG GAGGAGGAAC TGGAAACGAT
TTTCTCCGAG CTAGAACAAC ACTTTGGCGC TGTCACATAC GAGGCGTGGC TCAGTCTGCT
CGTCAACATT ACTCAAGACG ATGCGTCCTC CCCTGAACAA CTGCGCGAAG CTTTCAGAGG
CATGGCTGGG GAGAAGCCAT ACGTCACTGA CCTTGATTTT GAGTACGCGC ATTTGCCTAA
AGAGACAGTT AGGTTCTTGC AGGAGGCAAT GCCAGAAACG TCTGAGCTGC CCGAGTTGGA
AGAAGGGATG GAAAGACCTG CTAATGGTAC CACGAAGGCT TATGACTGTG AGTCAAGTCA
GCAGAGCATT GAAGTCACTT GCTTATTTGG GGCAGACAAC TCTTTCTTAG AAGTTGCTTT
TGCGCAGCAG TGTATCTGA
 
Protein sequence
MWSPQVDMER RASQQSALSP TPPTNKHGRT KSLSAISNFN AAMNINAGGP GGGAPMSPVR 
MGSPLIGPGG AVEFEWADIQ ARTFCRWLNK QLESHGLEPM TDVVKDFSSG VKLIQLLEII
SEESLGRYVK NPRLRVQKAE NAAKALNFIR SKGIKLTNIG PEDIVDGNLK LILGMIWTLI
LRFTIANITE SGLSARDGLL LWCQRKTTGY NPEVDVQNFK GSFADGLALC ALIHYHRPEL
LDYHGLDKAD KRNNTELAFK VAEEKLGIPR LLEVKDLCDV EVPDERSVMT YVAEFFHKFS
SEDKAETGAR RVEKFAEVMQ GVWANKNDFE RRLDLLLSAL SVTEQSWFIA PQPSTYPEAI
SYLAQFNDYK RTSKREWVKE RQELAALYSN IQTKIRTYSL KPWEPSEGAR LEDLEKRWAE
FLVSETARSR AINASVRDIK ETLKKKFARA AEDFIHRLQQ IEQAIGALAG PLPQQKQTLS
QLSSSIPSLY KLLSTEISDL NNSCLEAKVE ENDYTVLTVD DLEYELELAE VGLKKKIAFI
DNQLVSAQHT NITPAKLEEF EATFKHFAWE ETNTLGMWEM HSALASLGIV YAEEELETIF
SELEQHFGAV TYEAWLSLLV NITQDDASSP EQLREAFRGM AGEKPYVTDL DFEYAHLPKE
TVRFLQEAMP ETSELPELEE GMERPANGTT KAYDYNSFLE VAFAQQCI