Gene CNC05940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNC05940 
Symbol 
ID3256168 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006685 
Strand+ 
Start bp1756716 
End bp1757861 
Gene Length1146 bp 
Protein Length323 aa 
Translation table 
GC content49% 
IMG OID638255815 
Productnuclear mRNA splicing, via spliceosome-related protein, putative 
Protein accessionXP_569820 
Protein GI58265328 
COG category[S] Function unknown 
COG ID[COG5134] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.900704 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATATG CTTACTGTGA CCTGTTCTTG TACAGCTTCC CTCCGGATTT TGATCCGTCG 
AAGATCAAAC GGCGCAAGAT GCCGAAGGAC CCTCAGCAGG TCATTCGACT GATGGCGCCG 
TTCTCCATGA GGTGTAACAG GTGCGGAGAG TACATCTGTA AGTCAACTCA TTCTATGGAG 
ACTTTGTGGA TACAGCACTA ACGGACTTCT TTAGATAAAG GAAAGAAGTT CAACGCGAGG 
AAAGAGACGG CTGTCGGGGA GGAATACTAC GGTATCAAGG TGTTTAGGTT TTACATCGTG 
TGTTTTTTTT TTTGGTACTT CAATCTCCAA TGGCCATTGT ATTGACGGAA AGCTTTAGAA 
ATGCCCAATG TGTTCCTCTG AAATCACATT CAAGACCGAT CCCAAAAATG CCGACTATAC 
TTGCGAGCAG GGTGCTACCC GCAACTTTGA AAATTGGATT GAGAATGATC CCACGGGGAA 
AGCAGGTGCC ATGCCAGATG CAGCGGCGGA TGACGATTAT GATTCCGAGG GAAATTTGAG 
GGAAGAAGCT CAGGAAAGAG ATGCTATGGC TGATCTGGAG AGAAGTCAAG AGCAGAGTAA 
AAGAGAAATG GAAATGATGG ACGAGCTGGC CGATCTTCGG TTTGTTTATT TTAGCTTTTT 
GTTTTGACTT CTACTAACTT GTGGCGTTTC TACAGACAGC GAAACGCTCG TGTCGAGCTG 
AACAAGACCG ATCAAGATCC CGAGTCGCTC CTTGCCGCTC TCCACGCGGA AAAGATTTCC 
GCAGAGGAAG AAGCTCGACA GAAGGCCGAG CAAGAAGAAG ATGATGCTCT TGTCCGGCAG 
TACTTTGCAA AGGTCGCGGG TCCTGCTGGA TCTGGCGCTC AAAAATCTGA AAAGACCAAA 
ACCCCTGACG GAGAGGCGGA AGGCTCGGAG GAAGAGAACA CGGCTCTGCC CCAGTTGACC 
ATCAAGCGAC GACCCGTACC TGGCACTGAA AAGGCTGGAG AACCGAGTGT ACAAAATCTC 
TTGGCGGCTA AGGGGAAGGT TTTGGAAACT GCTGGCCCGA ATGGTGTTGG GGCGCCGCCT 
CAGGTCAAGA GGAAGAGAGA AGGGATGCAA AAGTTGTTAG GGATAAAGAA AAAGGCTAAG 
GCTTAA
 
Protein sequence
MKYAYCDLFL YSFPPDFDPS KIKRRKMPKD PQQVIRLMAP FSMRCNRCGE YIYKGKKFNA 
RKETAVGEEY YGIKVFRFYI KCPMCSSEIT FKTDPKNADY TCEQGATRNF ENWIENDPTG 
KAGAMPDAAA DDDYDSEGNL REEAQERDAM ADLERSQEQS KREMEMMDEL ADLRQRNARV 
ELNKTDQDPE SLLAALHAEK ISAEEEARQK AEQEEDDALV RQYFAKVAGP AGSGAQKSEK 
TKTPDGEAEG SEEENTALPQ LTIKRRPVPG TEKAGEPSVQ NLLAAKGKVL ETAGPNGVGA 
PPQVKRKREG MQKLLGIKKK AKA