Gene CNC05910 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNC05910 
Symbol 
ID3256407 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006685 
Strand
Start bp1748374 
End bp1751507 
Gene Length3134 bp 
Protein Length949 aa 
Translation table 
GC content52% 
IMG OID638255812 
Producthypothetical protein 
Protein accessionXP_569816 
Protein GI58265320 
COG category[R] General function prediction only 
COG ID[COG2319] FOG: WD40 repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GGGTATACCA CCACAAAAAT GAGCGGAACC CACTCTAGAA AGTCTCTCAA GACTAGGTAC 
GTTGGTGCCG AATTTTTCTT GCCTAAAACA TCCACTGACC TTTACTGTAG CTTCCGACCG
TCTCCGCGGT CCATCCGCCC TATCTATACT GGCGGACCCG TTCTTCTTAC CAAGGATGGC
CAGTGGATAA TCACTACCAT GGGAGAAGAG GCCTTGGTGA CGGAAGTGCA GACTGGGTTG
GCTATCGCTA GAATACGAGG GGCAAGTTTC ATCGCATTTC TTTTCACTCT ATCTGATCCC
ATGTACTGAC TTTATTCATC AGGACGGCAC ACCCATTACG TCCCTCTCGC TCTCCTACCA
TACTTCACCA CCTACTCTCA TCACATCGCA CATGTCCATG ACTGTCCGGT ACTACCCTCT
TCCTGAATCA GCACCCCTCT CATCTACTCC CAAACCCCCT TCATTAACCT ACACCCGTAT
CCTCAACAAA GCCCACTCGG CTCCTATCCT CGTCTCAAAA GTTTCCCCCG ACAACACGCT
TTTAGCTACT GGATCCTCTG ATGGAATTGT CAAGGTCTGG GACTTGGCCG GTGGATACGT
GACACATCTG TTCAGAGGAC ATGGCGGTCC CGTTTCGGCA TTACACTTCA ACTTCCCCAT
CATCTCTGGA GAAGAACGAC GTCGTATGGA GCTTCTCACT GGGTCGACCG ACTCCAGGGT
ACGGGTTTAT GATCTTCGAG ATGCTAATGC CCGTGTTGTC GGTGGTGGGA ATGCGGTCAA
GCCTAAAGCA GTGCTCGAGG GTCACGTCTC TGTCGTTAGA GGGATTGATG TTACCCCCGA
CGGCAAATGG GCTGTCACCG GTGGTCGAGA CAAGGTCGTG CTTGTATGGG ATATGCTTTC
AGGAGAAACA ACGGCTTTGG CCAAAAAGGG TAAAGGAAAG GCGACAGCGG GCCCCAAGTT
GGTGCAAACT ATCATCGCAC AAGAGCAAGT CGAATCTTTG GGTTTATTGC CCCAAGAAGA
GCAAGTTTCT GGTGCAGCCG AAGGGAGATG GCTTTGCTAC ACCGGTGGAG ATAAAGGATT
GGTGAGGGTC TGGGACGTCC TCAAGGGAAC CCAGGTTGCT ACAATGAAAG GCGTCGAAGG
GGTCGATGAA ACAGAGTTGG ACGAGGACGA ACAGCGCGGC GTTCTTTCCG TAATGTACTC
CCCAACCTCC TCGTCCCTCG TATCTATCCA CGCCGATCAA AACATCATCT TCCATTCCCT
TTCCACTCTC CTTTCAACAC GTCAAATTAT AGGTTTCAAC GACGAAATCG TCGACGTCGC
CTTCCTCTCC CATCCCTCCG CACCAACCAC CTCCCCTTCC TCACTTCCGG AAACACCAGA
CATTCCCCAC TCCCACATGG CAGTCGCTAC AAACTCCAAC CTCTTGCGAG TCTACTCCAC
ATCCTCGTTC AATGCCCGAC TCCTTCCCGG ACACAGCGAT ATGATCCTCT GTCTTGACAT
CTCCCCCGAC CACCAATGGC TCGTCACCGG ATCCAAAGAC CATACTGCTC GCGTATGGGC
GCCTACCACC TGCGCAGAGG GCGATGGGTA TACATGGAAA TGCATCGCCA TCTGTGAAGG
CCACGCGGAA TCGATCGGTG CCGTCGCTTT TGCGCGCAAG CCTTCCGACA ACGGTCATGC
CCGGTTCCTC TTCACTGCAA GTCAGGACCG TACCATCAAA ATGTGGGATC TCACTCCCCT
TTCCAACTCT CTTTCTCCGT CTCCTATCCG CCCTCGGTCG ATGGCCACCC TCCGTGCCCA
CGAAAAGGAT ATCAACTCAC TCGATATCGC GCCCAACGAC AAGTTCCTCG TCTCGGGTTC
CCAAGACAAG CTTGTCAAGC TTTACGCCAT TGATTTCAAC CCGCCCAAGG TACCTGGAGA
AGGAAAAGGT GCGGAAGGAG GTTTCAAGGC TTTGGGTACT TGTGCAGGGC ATAGAAGAGG
TGTATGGACC GTGAGGTTTA GCAGGAATGA TAAAGTTGTG GCGAGCGGTA GTGCCGATAG
GACCGTCAAG CTTTGGAGTT TGGACGACTT TACTTGTCTC AAGGTTGGTT TTCATTTGGC
GTTTTTGTGT GTTGGCCTGG ACTTTCCCTG TTACTTTGCT GACTCTTGTA TATCCAGACT
TTTGAGGGTC ACACCAACTC TGTGCTTCGA GTGGACTTTT TGTCTCATGG TCAACAGCTC
GTGACTTCTG CGTCTGATGG GTTAGTGAAG CTCTGGAATA TCAAGGAAGA AGAATGTGTA
AAGACGTTGG ATAATCACGA AGACAAGGTG AGAGTTGCCT CCTACTCTCA CTTACAACGT
ACCATTTCAC TAATCTCTTT TTTATTTTTC CCTTTTCCTT GCAGATCTGG GCGCTTGCAC
ATTCATCCGA CGAATCCACC CTCCTCTCCG CCGGCGCCGA TTCCCTCCTC ACCATCTGGC
ACGACACCTC TCTCCTCGAA CAATCCGAGG CAAACGCCAC TCTCATCAAG TCCGTCCAGG
TCGAACAGGA TTTCATCAAC TACGTCGCTC TCAAAGACTA TCGCCGCGCC ATCTTACTCG
CACTCTCCAT GAGTCAGCCC GGACGTCTCT TCAACCTCTT CAGTACCGTC GTCAAGGGCC
GTCAGCCCGA TTTGACAGAG GAAGAACAAG GGATCACTGG GTCCAAAGAG ATTGATGAGA
TTATGAAGAC CTTGCCTGGA ATAGAGTTGG TGAGGTTGCT AAAGTTTGTG AGAGACTGGA
ATGCGAATGC CAAGATGGCA CCGGTGGCGC AGGTGATTTT GCACGCCATC TTCAAATTGA
GGAGTGCGGA GGATATCCTT GCGGCGTTTG AGCAGGCCAA CAGGTTGCCC AAGCGTTCAG
AGGAGGAAGA GGAGGATGAA GATGAGGACG AGGAGAAGGA GGAGGGAGAG GAAAAGAAGA
AGAAGAAGAA GAAGGAACGA CCGTCTCTCG GCGCGCCTAT AAGCATCAAG GATCTTCTCG
AAGGGCTTAT CCCATATTCT GAGAGGCATT TCAACAGGGT TGACAAGCTT GTGCAGGAAA
GTTACATGTT GGACTATGTG CTTGGCGAGA TGGAAGGTGG ATTGTTTGGT GAGGAGTTAA
TGGACCTCCA ATAA
 
Protein sequence
MSGTHSRKSL KTSFRPSPRS IRPIYTGGPV LLTKDGQWII TTMGEEALVT EVQTGLAIAR 
IRGDGTPITS LSLSYHTSPP TLITSHMSMT VRYYPLPESA PLSSTPKPPS LTYTRILNKA
HSAPILVSKV SPDNTLLATG SSDGIVKVWD LAGGYVTHLF RGHGGPVSAL HFNFPIISGE
ERRRMELLTG STDSRVRVYD LRDANARVVG GGNAVKPKAV LEGHVSVVRG IDVTPDGKWA
VTGGRDKVVL VWDMLSGETT ALAKKGKGKA TAGPKLVQTI IAQEQVESLG LLPQEEQVSG
AAEGRWLCYT GGDKGLVRVW DVLKGTQVAT MKGVEGVDET ELDEDEQRGV LSVMYSPTSS
SLVSIHADQN IIFHSLSTLL STRQIIGFND EIVDVAFLSH PSAPTTSPSS LPETPDIPHS
HMAVATNSNL LRVYSTSSFN ARLLPGHSDM ILCLDISPDH QWLVTGSKDH TARVWAPTTC
AEGDGYTWKC IAICEGHAES IGAVAFARKP SDNGHARFLF TASQDRTIKM WDLTPLSNSL
SPSPIRPRSM ATLRAHEKDI NSLDIAPNDK FLVSGSQDKL VKLYAIDFNP PKVPGEGKGA
EGGFKALGTC AGHRRGVWTV RFSRNDKVVA SGSADRTVKL WSLDDFTCLK TFEGHTNSVL
RVDFLSHGQQ LVTSASDGLV KLWNIKEEEC VKTLDNHEDK IWALAHSSDE STLLSAGADS
LLTIWHDTSL LEQSEANATL IKSVQVEQDF INYVALKDYR RAILLALSMS QPGRLFNLFS
TVVKGRQPDL TEEEQGITGS KEIDEIMKTL PGIELVRLLK FVRDWNANAK MAPVAQVILH
AIFKLRSAED ILAAFEQANR LPKRSEEEEE DEDEDEEKEE GEEKKKKKKK ERPSLGAPIS
IKDLLEGLIP YSERHFNRVD KLVQESYMLD YVLGEMEGGL FGEELMDLQ