Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNC05460 |
Symbol | |
ID | 3256826 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006685 |
Strand | - |
Start bp | 1624923 |
End bp | 1632810 |
Gene Length | 7888 bp |
Protein Length | 2265 aa |
Translation table | |
GC content | 50% |
IMG OID | 638255764 |
Product | 3'-5' exoribonuclease, putative |
Protein accession | XP_569749 |
Protein GI | 58265186 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning [K] Transcription |
COG ID | [COG5103] Cell division control protein, negative regulator of transcription |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.857743 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GACGCCCGTC CATCCATACT CCTTCCTTCC TTCCTACCTA CTCCCGTACT TCTTTTCCCC TGACCACTCT CGCCAGCCGG TACACGTCAA CCACCATCAT TCAATAACCC CGCGCAGGGA TGGACATTTG ATCCTTCCCT TCGAACAAGA CTTACAGCAA CATCCTCTCT TCCTCACTCT CTCTCATCCG ACAATCACCA GCCCATGTCA ATCCCTCCTC CCGGCCTGGG AGGCGGGGTC AGCAGAACAG GACCGCCTCC GGGATTTGGC GGCGGTGCGG CCCATTCTCC AGTTAGCGAT GCGAGTGCGG CCACCATGGC GAGCAATGCC GGCGTTGCGG GAAGTGTTGG CGGGGGTGCC GGTCGAAGAG ACGGTCAGGG CGGAACAGCA GTGATCGTTA GAGCACAGAT TGTATTCTTG TTAACGACTT TTACGGAAGA TAGCTTTGAA AAGGCCTCAG CTGAGATCAG GACGGTGAGT GTACAGCTCG CGTTTTGGAT GACTGAGCGT GTCAATACAT GTCACAGATA ACTGATCTAT AAACCGTAGC TTGCGTCTAC CAATGGGCCG GAAATGTACC ACCACTTTTT AAGGCGAGCG GTCGTGGTCG CCAACCCAAT TATCCAAACT CTAATCCAGC ATTCGAATCA ATACAAGGAT GACCCTGCCG CGCCTCCTCC TCAGATCCCT ACTACGGGTC AAGCTGCGCT TGTATGGAGA TTGCTCGTTA CTGAAGCAGC TAGGGCAGCT AGGGATGTGC AGCTCGCGCC CCATTTCTCC TTCATCATGC TTTCCTCCTC CCCATCAACT CCTCTTCCTT TGCCCTCTCT TCGATTGTTC AACCTCCCTC CTGCGCTGCT CTTCTCTCTC TCAGCATACA CACTTGCATC ACCTCACGTT TTCCCGCAAA ACCACGCGTC TTATCCTGTT TTCCATGCCA TCCTCGCCCA GACCTTCCAG CCTACTATGG AGCTTCTACG ATCGCCAGGT GTTCCATTCT GGATGATGAA CATCCCTGGA AGAGAGCCCT TTACCGACGA TTTGACTTTG CAGGAAGCCA GAACTTTGAT CCTCGCGCTC TTCCCGAGGG CCCAGAGCCC TACCAGCGGC ACCGCTTCTC GACCTGCTAC ACCTACCAAC CCGACTTCGC CACATTCTTC TCCTCTCAAC TCTCTTCAAC GTGCGACCCT CCTCACTTCT CTCACCGTCA AGTTTTCGTC TCCCGCCATC ATCCTTCAAA CTTTATCAGC GTTATCCCCA GGTGGACCGC CTCGGTCGCC TGGCAGCATT CCCCTTGAAG ACATCTTATT CGAGCTGGGT GAGAGTCTTA CCCAAGATGA GGGCACTGTT GAGGCTGTTG TGCAGAGATG GTGGGTCTCT TGGTTGTTTG AGGGCTCCCC AGAAGATGTC AGGCGAAGAG TCACTGAAGA AGCGTGTCAC GTTGTTCATG GTCTGTGTGA GGGATTGCCA CTGGGGCGTG TCGTAGATCT GCACGGCGTG ATCAAAGGAA TGTCGGCGAT CGTAAGTCCA TTTCGTCTAG TTTGCGGAGT TGTAATTGAT GAAAAATCAT CTCTAGGATG CTATCTCCTG GCCTGATGTG GTTAAGTCAT TTGACACTCC GATGACCATT GCGGCATATC CTTCCTCTAT TCCCCTCCTT GTTTCCCTCA TATGTCTTCC ATCACAGGCG CCCGTTCCAC CCATGGCTGG TCTTTTGCCA GCTCACCTAG AAGCACCCAT GTGGGAAAAC ATTTCTTCAC TTCTCTCTGT GTTGACGCAC CTTACGAGCC TTGCGCCCGA CGCGATGCCC ATCTTCACTA TGCCATCCGC TCCTCCACCT TCAGTCTACT CTCGTATCGT CGATCCTCCG CCTTCCGAGC AAGTGTGGAG CAAGGCTGCT CGTCAGCAGG CGAGAGATTT GCAGGGAGCC GGGTTGTGGA ATACTTTGGG TTTGATCCAA GTATTGGTGC ATGCGTGTGC TTTGGCAGAG ATGGACCATA ATTCAGACAG AGAAAGGGAA GAGAGGGCGG ATATTGGCAG GAGAGCTACA GAGATTTTGG AGAAGGCAGC CAAATTGGCG CCAGAGTTGG TTTTGATTGC GCTAGAGAAG CTTCCAGTGA GTTTGAACGG GTTAGATGCT TTAAGTTCTT TTTGCTGACT TATTTGCAGA AACCTCTTCC CTCCCCCGTT GTCGTTCAAC AGACTCGTCT TTTGGCGATG TACTTGTCAA CTAAACCTAG CGATATCACG TCATCTGCCC TGGTATTCCA TCAGATGTGG GAAATAAACC CTGAAAATCT TTTGTCGGTC TTGCTAGAGT TCTATGGGGA AGATGAAAAC AATTTGGGAA GAATTGTGGA GATCGGTTCA GAGTTGAAGG TGAGTTAATT TATGTGACGG GCGCCGCTAA CGCTGTAGAT TCTTGGCAAA CTTTTGGCTG TTCAGGATAA TCTTCACTTT GTCCTCGATG TGGCCGCTTT GGCATCTAAC AGAGAGTTGC TCAACTTGGA GCGATGGTTG GCGGATGGGA TTGAGGTTAA GGGAGAAGAG TTCCTCGAGG CTATCTTTGA CTTCGTTGAA CATAAGATCC GTCTTGAGTT TGAGCATCAG CATCAACCCG AAAACGCGCC CCCTCTATTG TTCACTCTCG GTCCCACTGT ATATTCTATC TTCATCCGTG TGGTTCGCAA TGCTCCTAAC CTCGCTCGTG AGGACATTGC TCGTTTCAAA AACCTTCGAA CGGATATACT CATCCTTCAC CCTCGTCTTC TCAACCTCCG ACCGCATAGC AAGCAAGAGC AAGGTTTCTC TGAAGCCAAA TTCGCGAAGG ATGTTGTTGA TAAGGTGGAC AAAATCTATC AACGAATGTA TGGTGGACAG CTCAAGTTGG ATGACGTGGT GGAAGAGCTG AAAGCTTTCC AAAAGTCGGA TGACAGCAAG GAGCAAGACA TTTTTGCGCA CGCACTTCAC TCGCTCTTTG ACGAGTACAA GTTTGTCAAG TCGTATCCTC CCAAGGAGTT GACCATGACT GGTCTCCTTT TCGGTGCCAT CATTGACTAT CGACTTGTCA AGGACACTCC GGCGTTTGTT GCGACACGAT ACGTCTTGGA TGCTTGCAAG ACTTCTCCCC ATGAACCCTT GTACCAATTT GGTATCACCG CTTTGAGCGT GCTCCGTAAC TCTCTTGTTG ACTTTCCCGG TCTCTGTCGA TCTCTTTTAG AGATTCCTGC TCTTCATGAG TCTCACCCTG TTCTAATCAA TGACATTCAG CAAGCGTTGA TCGAGAGGGA AGAGTTGGAC CTTCAAGGAG GCGTCAAATT GGCGTTTCCT GCTCTCAAAT TGCCTGTGCT TATTGAAGAG GGAGATGACG AGTTTAAAGA GCCAGAGACT GGGAAGAAAG ACGCCATCAT GTTCCACGTC AACCAGATCG CTCCTACCAA TTACGAGGAT AAGGCTAAAG CTTTGCTCGA GCTATTTGAA GACCAGTATT CTCGTTGGTT CGCGCACTAC TTTATCGACG TCCGAGTCAG TCTTGAGCAG AATAGGCATG AGATCTACTT GCAGTTGCTT CAAAAGCTCG GCTCACCTCT TCTCGACCGA CACATCCTCT GGGAGACGTA CAGGAAAGCG AGAGAGTTGC TCAACTCGGA GGCAACGATT AACTCTGCTT CAGAACGAGC GGTTCTCAAA ACGGTGGCCA TGTGGTTGGG CCGTATCACT CTCGCTCAGA ACAAGCCAAT CAGGATGAAA GAGCTTTCCG TAAAGGATCT CTTAATCCAA GGTTACGACA CCAAACGACT CATTGTTGCC ATTCCCTTTG TCTGTAACTT GCTTGCTTCT TGCAGAGATT CAGCTGTCTT CCACCCGCCC AACCCTTGGT TGGTTGCTAT TCTTAGACTT CTTTCCGAGT TTTACCACTT TGGTGAGCTT AGACTCAACA TGAAGTTCGA AATCGAAGTT CTTTTCAGCA AGCTCGGTAT CGAACTTGAC TCCTTCGAGC CATCCAACCT CCTTCGCATG CACGTCCCAC CACCCCCTGC TCAGCCCGAG ATCCCCAACC GACTCGACCT CGAGCTTCAA CGTGCCACAA GCGAACTTAT GAATGGTTCT CAGCGACTTG GAGACTTGCC TGGCAACGAG GCGTATGCTC GCATCCAGCA GTTGCAGACT GAGCAAGCTG TACAAGCCGC TCAGGATGCG TTGGCGCGTC GCGTCGATGA GCTTATTGCT CAACTTCCCG AGTACCTCGT CTTCAACCAA GATTACCCCA TCTTTACCGC TCCAACTCTC AAGCGTATCG TGCACCACTC AATCGACAGG GCCATTCGTG AAATCATTAC TCCTGTTATC GAGCGTTCTG TCACCATTGC TGGTATCTCT TCTCGCGATT TGATTCAAAA AGATTTTGGT ACCGAGCCGG ATGCCATCAA GATGCGCCAG GCGGCTCACA TGATGGTGCA GAACCTTGCC GGTAGCTTGG CTTTAGTGAC GTGCAAAGAG CCGTTGCGTT CTAGCATGAT TGCCAATGTC AAGTCCATGC TCGAACAGAA CGGTTACACG GATGAGACCA TGCCGGATGC GATGATTGCG GGTGTAGTAA ATCAGAATTT GGATGTGGCA TGCGCGGTGT TAAAGAAAGC CGCCATGGAA AAAGCAGCCA AGGATATTGA TGTCAATCTT GCACCTCAAT ATGCCGCGCG AAAGGCCCAC CAGAATTCGA GATCTACTGC TCCTTTCTGG GACAGTGCCT CTTTCGGTGT TGCCATCTCT CACACTGCTC TTCCCGACCC TCTCAAACTT CGTCCTGGCG GTCTTACCCC TCAGCAGTTC AGAGTGTATG AAGACTTTGG CGAGCCTACG AGGATGCTGT CATCTCATCC CGCTGCCAAC GGCGATTATC TGTCCGCTAG CTATCAAAAC CTTACTCTCA ACGACGGACT CGTTCCTGCC GAAATCAAGA CTGGCCCTTC GCCTCGTCAC GGCTTTGTTC AAGACGTTGT TGAGGCTCCC GAAATTGTTG CGTCGCCCCG TGCTATCCCG CCTCAGACTA GCATTGATAA GTTCCACGAG GTTGCGGCTG AGATCCAGAA GATCGTCTCC CAGACCCATG TACCCAGCAT TTCGGCCCTT CCTGCTGACC ATGAGCTTCG AGATCTTATT CGAGGCATCG TTATTATTGC GAACCAGTCT GTGCACAGGG AGAACACAAC TTTGGCGATT GCCCAAAAAG TTGTGCAGCT ATTGTACAGG TCCACGGTAC AGTTAGACCG GGAGGTGTAT GTGTACTTGT TGCAGCAGTT GTGCGATTTG TCGGCGAAGG TGGACAAGGA AGTGAAGCAG TGGCTGATCT ATGCGGAGGA TGTGGTAAGT CATGTTTAGG TAATTTCTTT GATTAAGCTA ACGTTTTTGC AGAGGAAACT GAATGTCCCT GTTACTGTAA CTCTTCTTCG CGCTCAGTCC ATCGGCGTGC AAGAGCTTGA CGTTGCCCTT TCCCACATCA TCATCCGGTC CTACCCCTCC GAAATCCTCG ACTTCGTCAC TCAACTCATC CGTGAATGCT CGGTGTCTGA TATCGCATTC CTTCCTCGAC AGGCTTTCTC TCATAGTCTA GCTTCGCTTC TTAAGGCTCA GGAAGATGGC CATGCTACTG CTCAAGTTGA CTCATTGCTC GAAGAGCTTC GTGGCCCACG AGAGCCTCAG AGTAGCATCG AGGGTGATCA TTCCAAGACT GTCATTGACA GCAAGCTTCA GGAGAGATTA GCTCACTACT TCTTGGAGTG GGTTCGAGTC TGCAGCTCTA GCAAGGATCC CGAAGTTCCT TTCGTGCCCT ACATCACTTT CTTGCAAAAG GAGGGTATCC TCAGCGGTGA GGATGTGTCA TCTGCATTTT ACCGCACTGC TATCAATACC GCCGTCGATC TCGACACTGC CAAGCTTACC CCCGATGGCT CATCAAGATT TTACGGCGTA GATGCTTTGG CCAAACTCAT TCTGTTCATC GTTAAAAACT ACGGTGACAA GAGCGGAGCC AGCAGTGTTG GTAGAGCCGT CTACTATTAC AACAAGATCA TTACGATCAT GTCGTACTCT CTCGTGCAAA GGCAACTTGC CATGGGTGAT GCTTTCAACC AGCGACCTTG GGCCAGGTTT TTTACAAGTA TGTTGAGCGA GTTGTCTACT ATTGAGTATG ACCTTCCTGA AACCTATATC GGCTGCTTGA AGCACCTTGC CAACAACCTC GGCATTACTC AGCCCACTTA CGCTCCCCGT TTCGCATTCG GCTGGGTCTC AGTTATCTCC CACCGTCTTT TCATGCCTAA ACTCCTCTCC ACTCAAAGGG ACGAAGGGTG GCCGGAGTTC CACCGATGCG TCATGTGGCT TCTTCGCTTC CTTGCGCCCT TCCTTCAGTC AGATGACATG ACTCCCTCGT CAAGATCAAT CTTCAAAGCT ACTATCCGAC TTCTCATGCT TCTTTTGCAT GACTTCCCCG AGTTCCTCGT TGAGTTCTAC CATACTCTCT CCACCGTCAT CCCTCCCCAC TGCACTCAAA TGCGAAACAT TGTCCTTTCT GCGTTCCCTC ATTCCGAGGC TCCTCTCCCC GATTACTACA AGCGGCTTGA TCAGCTTGTT GCGGAGATGC AGCGATTCCC CACCGTTCGC TCAGACTACA TTGGCGCATT GGCCGACGGT AACGTCAAAG CCGCCGTCGA CCAGTATGTC CGAACTGGCG TCCCTACTCT TCCTTCAATC GTGGCGGAGC TCAAGAACAG GATCGCGGTG AAGTCTTTGG GTCCTCAAGG CAGCACTGCT GTCACGTGGA ACCACACATT GATGCACGCT TCAGTATTCT ATCTTGGTAC CACTGCGGTT GCTAGGACCT TCCAGCAAAC GGGCGTTGCG AGCTTTGACC CGAAGACTCC TGAGGTGGCC GTGTTGGCTG GTTTAGCACA TGCGTTTGAC GGTGAAGGTG TGTTTTTTCT ACATAAAATG TACAACTGTG TACTGTATAC TGACGAACAT AATAGGCCAG TACTATATGC TCAATGTGGT TGCTGATCAG CTTCGATACC CATCCGCTCA TACTCTTTTC TTCATCCACT TCATGCTCTT CCTTTTCGGT ACCAGTGTGC AACCCGAGCT TTCATCTACC ATCCCCGAGC GTATCGCCCG TATCCTTCTC GAACGAACCA TTGTCAAACG CCCTCATCCT TGGGGTCTAC TTGTCACTTT CATCGAGTTG CTCGACAACG AGGCGTATGG GTTCTGGAAA CAGCCATTTG TCAGGGCGCA GGATGAGGTG TTCAGACTCT TCGGCCAGGT GCGACAGTCT GTCGCGGCGC GCAGGGAATT GCAGTAAAAG GTTGAGACGT CCATCTATGG TCTTTAGGGT GAGTATCTTG TTTCAACCAT ATATGACTAA ACACTGATCA TTTTGCACAG ATCATCTAAT GTTCATTTTT CTTTCTTTTT CCGGGACGTC GTCTGCGCAT ACACCATTCT TAAGAGTCCC CAAAGCATAT TCTCAGTTAT TGACATCTGC GCGTATTTTT CTTTTCTTTT TTTCTCGGTC TATACAGTTC TCGTTTTCTC TATTCTCGAA ATCAATGTTT GTCCTACTAG TAGAACCCCT TCTCCAAAAG CCAGTGAATA TATATCATGG GTCTTGGTTT TAGTACATAC AACAATTCCC CTTCATCTGT AGCCCTTTGC TAGCCCGGCG GAACACCAAC GTTAATCTAG CGAATGGATA GGAAATGCAT CACAAGAAAG TTACGAATAT TCAGACTTGG GTCTATAGCT GGCGCCTTAT AGTTGCTCGT GGAGAAGGGG GTGCAAGGTA GTTTGTATAC TAGTCGAAGT ATATATGCAT AATGGTCTTC TTCATTAT
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Protein sequence | MSIPPPGLGG GVSRTGPPPG FGGGAAHSPV SDASAATMAS NAGVAGSVGG GAGRRDGQGG TAVIVRAQIV FLLTTFTEDS FEKASAEIRT LASTNGPEMY HHFLRRAVVV ANPIIQTLIQ HSNQYKDDPA APPPQIPTTG QAALVWRLLV TEAARAARDV QLAPHFSFIM LSSSPSTPLP LPSLRLFNLP PALLFSLSAY TLASPHVFPQ NHASYPVFHA ILAQTFQPTM ELLRSPGVPF WMMNIPGREP FTDDLTLQEA RTLILALFPR AQSPTSGTAS RPATPTNPTS PHSSPLNSLQ RATLLTSLTV KFSSPAIILQ TLSALSPGGP PRSPGSIPLE DILFELGESL TQDEGTVEAV VQRWWVSWLF EGSPEDVRRR VTEEACHVVH GLCEGLPLGR VVDLHGVIKG MSAIDAISWP DVVKSFDTPM TIAAYPSSIP LLVSLICLPS QAPVPPMAGL LPAHLEAPMW ENISSLLSVL THLTSLAPDA MPIFTMPSAP PPSVYSRIVD PPPSEQVWSK AARQQARDLQ GAGLWNTLGL IQVLVHACAL AEMDHNSDRE REERADIGRR ATEILEKAAK LAPELVLIAL EKLPKPLPSP VVVQQTRLLA MYLSTKPSDI TSSALVFHQM WEINPENLLS VLLEFYGEDE NNLGRIVEIG SELKDNLHFV LDVAALASNR ELLNLERWLA DGIEVKGEEF LEAIFDFVEH KIRLEFEHQH QPENAPPLLF TLGPTVYSIF IRVVRNAPNL AREDIARFKN LRTDILILHP RLLNLRPHSK QEQGFSEAKF AKDVVDKVDK IYQRMYGGQL KLDDVVEELK AFQKSDDSKE QDIFAHALHS LFDEYKFVKS YPPKELTMTG LLFGAIIDYR LVKDTPAFVA TRYVLDACKT SPHEPLYQFG ITALSVLRNS LVDFPGLCRS LLEIPALHES HPVLINDIQQ ALIEREELDL QGGVKLAFPA LKLPVLIEEG DDEFKEPETG KKDAIMFHVN QIAPTNYEDK AKALLELFED QYSRWFAHYF IDVRVSLEQN RHEIYLQLLQ KLGSPLLDRH ILWETYRKAR ELLNSEATIN SASERAVLKT VAMWLGRITL AQNKPIRMKE LSVKDLLIQG YDTKRLIVAI PFVCNLLASC RDSAVFHPPN PWLVAILRLL SEFYHFGELR LNMKFEIEVL FSKLGIELDS FEPSNLLRMH VPPPPAQPEI PNRLDLELQR ATSELMNGSQ RLGDLPGNEA YARIQQLQTE QAVQAAQDAL ARRVDELIAQ LPEYLVFNQD YPIFTAPTLK RIVHHSIDRA IREIITPVIE RSVTIAGISS RDLIQKDFGT EPDAIKMRQA AHMMVQNLAG SLALVTCKEP LRSSMIANVK SMLEQNGYTD ETMPDAMIAG VVNQNLDVAC AVLKKAAMEK AAKDIDVNLA PQYAARKAHQ NSRSTAPFWD SASFGVAISH TALPDPLKLR PGGLTPQQFR VYEDFGEPTR MLSSHPAANG DYLSASYQNL TLNDGLVPAE IKTGPSPRHG FVQDVVEAPE IVASPRAIPP QTSIDKFHEV AAEIQKIVSQ THVPSISALP ADHELRDLIR GIVIIANQSV HRENTTLAIA QKVVQLLYRS TVQLDREVYV YLLQQLCDLS AKVDKEVKQW LIYAEDVRKL NVPVTVTLLR AQSIGVQELD VALSHIIIRS YPSEILDFVT QLIRECSVSD IAFLPRQAFS HSLASLLKAQ EDGHATAQVD SLLEELRGPR EPQSSIEGDH SKTVIDSKLQ ERLAHYFLEW VRVCSSSKDP EVPFVPYITF LQKEGILSGE DVSSAFYRTA INTAVDLDTA KLTPDGSSRF YGVDALAKLI LFIVKNYGDK SGASSVGRAV YYYNKIITIM SYSLVQRQLA MGDAFNQRPW ARFFTSMLSE LSTIEYDLPE TYIGCLKHLA NNLGITQPTY APRFAFGWVS VISHRLFMPK LLSTQRDEGW PEFHRCVMWL LRFLAPFLQS DDMTPSSRSI FKATIRLLML LLHDFPEFLV EFYHTLSTVI PPHCTQMRNI VLSAFPHSEA PLPDYYKRLD QLVAEMQRFP TVRSDYIGAL ADGNVKAAVD QYVRTGVPTL PSIVAELKNR IAVKSLGPQG STAVTWNHTL MHASVFYLGT TAVARTFQQT GVASFDPKTP EVAVLAGLAH AFDGEGQYYM LNVVADQLRY PSAHTLFFIH FMLFLFGTSV QPELSSTIPE RIARILLERT IVKRPHPWGL LVTFIELLDN EAYGFWKQPF VRAQDEVFRL FGQVRQSVAA RRELQ
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