Gene CNC05460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNC05460 
Symbol 
ID3256826 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006685 
Strand
Start bp1624923 
End bp1632810 
Gene Length7888 bp 
Protein Length2265 aa 
Translation table 
GC content50% 
IMG OID638255764 
Product3'-5' exoribonuclease, putative 
Protein accessionXP_569749 
Protein GI58265186 
COG category[D] Cell cycle control, cell division, chromosome partitioning
[K] Transcription 
COG ID[COG5103] Cell division control protein, negative regulator of transcription 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.857743 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GACGCCCGTC CATCCATACT CCTTCCTTCC TTCCTACCTA CTCCCGTACT TCTTTTCCCC 
TGACCACTCT CGCCAGCCGG TACACGTCAA CCACCATCAT TCAATAACCC CGCGCAGGGA
TGGACATTTG ATCCTTCCCT TCGAACAAGA CTTACAGCAA CATCCTCTCT TCCTCACTCT
CTCTCATCCG ACAATCACCA GCCCATGTCA ATCCCTCCTC CCGGCCTGGG AGGCGGGGTC
AGCAGAACAG GACCGCCTCC GGGATTTGGC GGCGGTGCGG CCCATTCTCC AGTTAGCGAT
GCGAGTGCGG CCACCATGGC GAGCAATGCC GGCGTTGCGG GAAGTGTTGG CGGGGGTGCC
GGTCGAAGAG ACGGTCAGGG CGGAACAGCA GTGATCGTTA GAGCACAGAT TGTATTCTTG
TTAACGACTT TTACGGAAGA TAGCTTTGAA AAGGCCTCAG CTGAGATCAG GACGGTGAGT
GTACAGCTCG CGTTTTGGAT GACTGAGCGT GTCAATACAT GTCACAGATA ACTGATCTAT
AAACCGTAGC TTGCGTCTAC CAATGGGCCG GAAATGTACC ACCACTTTTT AAGGCGAGCG
GTCGTGGTCG CCAACCCAAT TATCCAAACT CTAATCCAGC ATTCGAATCA ATACAAGGAT
GACCCTGCCG CGCCTCCTCC TCAGATCCCT ACTACGGGTC AAGCTGCGCT TGTATGGAGA
TTGCTCGTTA CTGAAGCAGC TAGGGCAGCT AGGGATGTGC AGCTCGCGCC CCATTTCTCC
TTCATCATGC TTTCCTCCTC CCCATCAACT CCTCTTCCTT TGCCCTCTCT TCGATTGTTC
AACCTCCCTC CTGCGCTGCT CTTCTCTCTC TCAGCATACA CACTTGCATC ACCTCACGTT
TTCCCGCAAA ACCACGCGTC TTATCCTGTT TTCCATGCCA TCCTCGCCCA GACCTTCCAG
CCTACTATGG AGCTTCTACG ATCGCCAGGT GTTCCATTCT GGATGATGAA CATCCCTGGA
AGAGAGCCCT TTACCGACGA TTTGACTTTG CAGGAAGCCA GAACTTTGAT CCTCGCGCTC
TTCCCGAGGG CCCAGAGCCC TACCAGCGGC ACCGCTTCTC GACCTGCTAC ACCTACCAAC
CCGACTTCGC CACATTCTTC TCCTCTCAAC TCTCTTCAAC GTGCGACCCT CCTCACTTCT
CTCACCGTCA AGTTTTCGTC TCCCGCCATC ATCCTTCAAA CTTTATCAGC GTTATCCCCA
GGTGGACCGC CTCGGTCGCC TGGCAGCATT CCCCTTGAAG ACATCTTATT CGAGCTGGGT
GAGAGTCTTA CCCAAGATGA GGGCACTGTT GAGGCTGTTG TGCAGAGATG GTGGGTCTCT
TGGTTGTTTG AGGGCTCCCC AGAAGATGTC AGGCGAAGAG TCACTGAAGA AGCGTGTCAC
GTTGTTCATG GTCTGTGTGA GGGATTGCCA CTGGGGCGTG TCGTAGATCT GCACGGCGTG
ATCAAAGGAA TGTCGGCGAT CGTAAGTCCA TTTCGTCTAG TTTGCGGAGT TGTAATTGAT
GAAAAATCAT CTCTAGGATG CTATCTCCTG GCCTGATGTG GTTAAGTCAT TTGACACTCC
GATGACCATT GCGGCATATC CTTCCTCTAT TCCCCTCCTT GTTTCCCTCA TATGTCTTCC
ATCACAGGCG CCCGTTCCAC CCATGGCTGG TCTTTTGCCA GCTCACCTAG AAGCACCCAT
GTGGGAAAAC ATTTCTTCAC TTCTCTCTGT GTTGACGCAC CTTACGAGCC TTGCGCCCGA
CGCGATGCCC ATCTTCACTA TGCCATCCGC TCCTCCACCT TCAGTCTACT CTCGTATCGT
CGATCCTCCG CCTTCCGAGC AAGTGTGGAG CAAGGCTGCT CGTCAGCAGG CGAGAGATTT
GCAGGGAGCC GGGTTGTGGA ATACTTTGGG TTTGATCCAA GTATTGGTGC ATGCGTGTGC
TTTGGCAGAG ATGGACCATA ATTCAGACAG AGAAAGGGAA GAGAGGGCGG ATATTGGCAG
GAGAGCTACA GAGATTTTGG AGAAGGCAGC CAAATTGGCG CCAGAGTTGG TTTTGATTGC
GCTAGAGAAG CTTCCAGTGA GTTTGAACGG GTTAGATGCT TTAAGTTCTT TTTGCTGACT
TATTTGCAGA AACCTCTTCC CTCCCCCGTT GTCGTTCAAC AGACTCGTCT TTTGGCGATG
TACTTGTCAA CTAAACCTAG CGATATCACG TCATCTGCCC TGGTATTCCA TCAGATGTGG
GAAATAAACC CTGAAAATCT TTTGTCGGTC TTGCTAGAGT TCTATGGGGA AGATGAAAAC
AATTTGGGAA GAATTGTGGA GATCGGTTCA GAGTTGAAGG TGAGTTAATT TATGTGACGG
GCGCCGCTAA CGCTGTAGAT TCTTGGCAAA CTTTTGGCTG TTCAGGATAA TCTTCACTTT
GTCCTCGATG TGGCCGCTTT GGCATCTAAC AGAGAGTTGC TCAACTTGGA GCGATGGTTG
GCGGATGGGA TTGAGGTTAA GGGAGAAGAG TTCCTCGAGG CTATCTTTGA CTTCGTTGAA
CATAAGATCC GTCTTGAGTT TGAGCATCAG CATCAACCCG AAAACGCGCC CCCTCTATTG
TTCACTCTCG GTCCCACTGT ATATTCTATC TTCATCCGTG TGGTTCGCAA TGCTCCTAAC
CTCGCTCGTG AGGACATTGC TCGTTTCAAA AACCTTCGAA CGGATATACT CATCCTTCAC
CCTCGTCTTC TCAACCTCCG ACCGCATAGC AAGCAAGAGC AAGGTTTCTC TGAAGCCAAA
TTCGCGAAGG ATGTTGTTGA TAAGGTGGAC AAAATCTATC AACGAATGTA TGGTGGACAG
CTCAAGTTGG ATGACGTGGT GGAAGAGCTG AAAGCTTTCC AAAAGTCGGA TGACAGCAAG
GAGCAAGACA TTTTTGCGCA CGCACTTCAC TCGCTCTTTG ACGAGTACAA GTTTGTCAAG
TCGTATCCTC CCAAGGAGTT GACCATGACT GGTCTCCTTT TCGGTGCCAT CATTGACTAT
CGACTTGTCA AGGACACTCC GGCGTTTGTT GCGACACGAT ACGTCTTGGA TGCTTGCAAG
ACTTCTCCCC ATGAACCCTT GTACCAATTT GGTATCACCG CTTTGAGCGT GCTCCGTAAC
TCTCTTGTTG ACTTTCCCGG TCTCTGTCGA TCTCTTTTAG AGATTCCTGC TCTTCATGAG
TCTCACCCTG TTCTAATCAA TGACATTCAG CAAGCGTTGA TCGAGAGGGA AGAGTTGGAC
CTTCAAGGAG GCGTCAAATT GGCGTTTCCT GCTCTCAAAT TGCCTGTGCT TATTGAAGAG
GGAGATGACG AGTTTAAAGA GCCAGAGACT GGGAAGAAAG ACGCCATCAT GTTCCACGTC
AACCAGATCG CTCCTACCAA TTACGAGGAT AAGGCTAAAG CTTTGCTCGA GCTATTTGAA
GACCAGTATT CTCGTTGGTT CGCGCACTAC TTTATCGACG TCCGAGTCAG TCTTGAGCAG
AATAGGCATG AGATCTACTT GCAGTTGCTT CAAAAGCTCG GCTCACCTCT TCTCGACCGA
CACATCCTCT GGGAGACGTA CAGGAAAGCG AGAGAGTTGC TCAACTCGGA GGCAACGATT
AACTCTGCTT CAGAACGAGC GGTTCTCAAA ACGGTGGCCA TGTGGTTGGG CCGTATCACT
CTCGCTCAGA ACAAGCCAAT CAGGATGAAA GAGCTTTCCG TAAAGGATCT CTTAATCCAA
GGTTACGACA CCAAACGACT CATTGTTGCC ATTCCCTTTG TCTGTAACTT GCTTGCTTCT
TGCAGAGATT CAGCTGTCTT CCACCCGCCC AACCCTTGGT TGGTTGCTAT TCTTAGACTT
CTTTCCGAGT TTTACCACTT TGGTGAGCTT AGACTCAACA TGAAGTTCGA AATCGAAGTT
CTTTTCAGCA AGCTCGGTAT CGAACTTGAC TCCTTCGAGC CATCCAACCT CCTTCGCATG
CACGTCCCAC CACCCCCTGC TCAGCCCGAG ATCCCCAACC GACTCGACCT CGAGCTTCAA
CGTGCCACAA GCGAACTTAT GAATGGTTCT CAGCGACTTG GAGACTTGCC TGGCAACGAG
GCGTATGCTC GCATCCAGCA GTTGCAGACT GAGCAAGCTG TACAAGCCGC TCAGGATGCG
TTGGCGCGTC GCGTCGATGA GCTTATTGCT CAACTTCCCG AGTACCTCGT CTTCAACCAA
GATTACCCCA TCTTTACCGC TCCAACTCTC AAGCGTATCG TGCACCACTC AATCGACAGG
GCCATTCGTG AAATCATTAC TCCTGTTATC GAGCGTTCTG TCACCATTGC TGGTATCTCT
TCTCGCGATT TGATTCAAAA AGATTTTGGT ACCGAGCCGG ATGCCATCAA GATGCGCCAG
GCGGCTCACA TGATGGTGCA GAACCTTGCC GGTAGCTTGG CTTTAGTGAC GTGCAAAGAG
CCGTTGCGTT CTAGCATGAT TGCCAATGTC AAGTCCATGC TCGAACAGAA CGGTTACACG
GATGAGACCA TGCCGGATGC GATGATTGCG GGTGTAGTAA ATCAGAATTT GGATGTGGCA
TGCGCGGTGT TAAAGAAAGC CGCCATGGAA AAAGCAGCCA AGGATATTGA TGTCAATCTT
GCACCTCAAT ATGCCGCGCG AAAGGCCCAC CAGAATTCGA GATCTACTGC TCCTTTCTGG
GACAGTGCCT CTTTCGGTGT TGCCATCTCT CACACTGCTC TTCCCGACCC TCTCAAACTT
CGTCCTGGCG GTCTTACCCC TCAGCAGTTC AGAGTGTATG AAGACTTTGG CGAGCCTACG
AGGATGCTGT CATCTCATCC CGCTGCCAAC GGCGATTATC TGTCCGCTAG CTATCAAAAC
CTTACTCTCA ACGACGGACT CGTTCCTGCC GAAATCAAGA CTGGCCCTTC GCCTCGTCAC
GGCTTTGTTC AAGACGTTGT TGAGGCTCCC GAAATTGTTG CGTCGCCCCG TGCTATCCCG
CCTCAGACTA GCATTGATAA GTTCCACGAG GTTGCGGCTG AGATCCAGAA GATCGTCTCC
CAGACCCATG TACCCAGCAT TTCGGCCCTT CCTGCTGACC ATGAGCTTCG AGATCTTATT
CGAGGCATCG TTATTATTGC GAACCAGTCT GTGCACAGGG AGAACACAAC TTTGGCGATT
GCCCAAAAAG TTGTGCAGCT ATTGTACAGG TCCACGGTAC AGTTAGACCG GGAGGTGTAT
GTGTACTTGT TGCAGCAGTT GTGCGATTTG TCGGCGAAGG TGGACAAGGA AGTGAAGCAG
TGGCTGATCT ATGCGGAGGA TGTGGTAAGT CATGTTTAGG TAATTTCTTT GATTAAGCTA
ACGTTTTTGC AGAGGAAACT GAATGTCCCT GTTACTGTAA CTCTTCTTCG CGCTCAGTCC
ATCGGCGTGC AAGAGCTTGA CGTTGCCCTT TCCCACATCA TCATCCGGTC CTACCCCTCC
GAAATCCTCG ACTTCGTCAC TCAACTCATC CGTGAATGCT CGGTGTCTGA TATCGCATTC
CTTCCTCGAC AGGCTTTCTC TCATAGTCTA GCTTCGCTTC TTAAGGCTCA GGAAGATGGC
CATGCTACTG CTCAAGTTGA CTCATTGCTC GAAGAGCTTC GTGGCCCACG AGAGCCTCAG
AGTAGCATCG AGGGTGATCA TTCCAAGACT GTCATTGACA GCAAGCTTCA GGAGAGATTA
GCTCACTACT TCTTGGAGTG GGTTCGAGTC TGCAGCTCTA GCAAGGATCC CGAAGTTCCT
TTCGTGCCCT ACATCACTTT CTTGCAAAAG GAGGGTATCC TCAGCGGTGA GGATGTGTCA
TCTGCATTTT ACCGCACTGC TATCAATACC GCCGTCGATC TCGACACTGC CAAGCTTACC
CCCGATGGCT CATCAAGATT TTACGGCGTA GATGCTTTGG CCAAACTCAT TCTGTTCATC
GTTAAAAACT ACGGTGACAA GAGCGGAGCC AGCAGTGTTG GTAGAGCCGT CTACTATTAC
AACAAGATCA TTACGATCAT GTCGTACTCT CTCGTGCAAA GGCAACTTGC CATGGGTGAT
GCTTTCAACC AGCGACCTTG GGCCAGGTTT TTTACAAGTA TGTTGAGCGA GTTGTCTACT
ATTGAGTATG ACCTTCCTGA AACCTATATC GGCTGCTTGA AGCACCTTGC CAACAACCTC
GGCATTACTC AGCCCACTTA CGCTCCCCGT TTCGCATTCG GCTGGGTCTC AGTTATCTCC
CACCGTCTTT TCATGCCTAA ACTCCTCTCC ACTCAAAGGG ACGAAGGGTG GCCGGAGTTC
CACCGATGCG TCATGTGGCT TCTTCGCTTC CTTGCGCCCT TCCTTCAGTC AGATGACATG
ACTCCCTCGT CAAGATCAAT CTTCAAAGCT ACTATCCGAC TTCTCATGCT TCTTTTGCAT
GACTTCCCCG AGTTCCTCGT TGAGTTCTAC CATACTCTCT CCACCGTCAT CCCTCCCCAC
TGCACTCAAA TGCGAAACAT TGTCCTTTCT GCGTTCCCTC ATTCCGAGGC TCCTCTCCCC
GATTACTACA AGCGGCTTGA TCAGCTTGTT GCGGAGATGC AGCGATTCCC CACCGTTCGC
TCAGACTACA TTGGCGCATT GGCCGACGGT AACGTCAAAG CCGCCGTCGA CCAGTATGTC
CGAACTGGCG TCCCTACTCT TCCTTCAATC GTGGCGGAGC TCAAGAACAG GATCGCGGTG
AAGTCTTTGG GTCCTCAAGG CAGCACTGCT GTCACGTGGA ACCACACATT GATGCACGCT
TCAGTATTCT ATCTTGGTAC CACTGCGGTT GCTAGGACCT TCCAGCAAAC GGGCGTTGCG
AGCTTTGACC CGAAGACTCC TGAGGTGGCC GTGTTGGCTG GTTTAGCACA TGCGTTTGAC
GGTGAAGGTG TGTTTTTTCT ACATAAAATG TACAACTGTG TACTGTATAC TGACGAACAT
AATAGGCCAG TACTATATGC TCAATGTGGT TGCTGATCAG CTTCGATACC CATCCGCTCA
TACTCTTTTC TTCATCCACT TCATGCTCTT CCTTTTCGGT ACCAGTGTGC AACCCGAGCT
TTCATCTACC ATCCCCGAGC GTATCGCCCG TATCCTTCTC GAACGAACCA TTGTCAAACG
CCCTCATCCT TGGGGTCTAC TTGTCACTTT CATCGAGTTG CTCGACAACG AGGCGTATGG
GTTCTGGAAA CAGCCATTTG TCAGGGCGCA GGATGAGGTG TTCAGACTCT TCGGCCAGGT
GCGACAGTCT GTCGCGGCGC GCAGGGAATT GCAGTAAAAG GTTGAGACGT CCATCTATGG
TCTTTAGGGT GAGTATCTTG TTTCAACCAT ATATGACTAA ACACTGATCA TTTTGCACAG
ATCATCTAAT GTTCATTTTT CTTTCTTTTT CCGGGACGTC GTCTGCGCAT ACACCATTCT
TAAGAGTCCC CAAAGCATAT TCTCAGTTAT TGACATCTGC GCGTATTTTT CTTTTCTTTT
TTTCTCGGTC TATACAGTTC TCGTTTTCTC TATTCTCGAA ATCAATGTTT GTCCTACTAG
TAGAACCCCT TCTCCAAAAG CCAGTGAATA TATATCATGG GTCTTGGTTT TAGTACATAC
AACAATTCCC CTTCATCTGT AGCCCTTTGC TAGCCCGGCG GAACACCAAC GTTAATCTAG
CGAATGGATA GGAAATGCAT CACAAGAAAG TTACGAATAT TCAGACTTGG GTCTATAGCT
GGCGCCTTAT AGTTGCTCGT GGAGAAGGGG GTGCAAGGTA GTTTGTATAC TAGTCGAAGT
ATATATGCAT AATGGTCTTC TTCATTAT
 
Protein sequence
MSIPPPGLGG GVSRTGPPPG FGGGAAHSPV SDASAATMAS NAGVAGSVGG GAGRRDGQGG 
TAVIVRAQIV FLLTTFTEDS FEKASAEIRT LASTNGPEMY HHFLRRAVVV ANPIIQTLIQ
HSNQYKDDPA APPPQIPTTG QAALVWRLLV TEAARAARDV QLAPHFSFIM LSSSPSTPLP
LPSLRLFNLP PALLFSLSAY TLASPHVFPQ NHASYPVFHA ILAQTFQPTM ELLRSPGVPF
WMMNIPGREP FTDDLTLQEA RTLILALFPR AQSPTSGTAS RPATPTNPTS PHSSPLNSLQ
RATLLTSLTV KFSSPAIILQ TLSALSPGGP PRSPGSIPLE DILFELGESL TQDEGTVEAV
VQRWWVSWLF EGSPEDVRRR VTEEACHVVH GLCEGLPLGR VVDLHGVIKG MSAIDAISWP
DVVKSFDTPM TIAAYPSSIP LLVSLICLPS QAPVPPMAGL LPAHLEAPMW ENISSLLSVL
THLTSLAPDA MPIFTMPSAP PPSVYSRIVD PPPSEQVWSK AARQQARDLQ GAGLWNTLGL
IQVLVHACAL AEMDHNSDRE REERADIGRR ATEILEKAAK LAPELVLIAL EKLPKPLPSP
VVVQQTRLLA MYLSTKPSDI TSSALVFHQM WEINPENLLS VLLEFYGEDE NNLGRIVEIG
SELKDNLHFV LDVAALASNR ELLNLERWLA DGIEVKGEEF LEAIFDFVEH KIRLEFEHQH
QPENAPPLLF TLGPTVYSIF IRVVRNAPNL AREDIARFKN LRTDILILHP RLLNLRPHSK
QEQGFSEAKF AKDVVDKVDK IYQRMYGGQL KLDDVVEELK AFQKSDDSKE QDIFAHALHS
LFDEYKFVKS YPPKELTMTG LLFGAIIDYR LVKDTPAFVA TRYVLDACKT SPHEPLYQFG
ITALSVLRNS LVDFPGLCRS LLEIPALHES HPVLINDIQQ ALIEREELDL QGGVKLAFPA
LKLPVLIEEG DDEFKEPETG KKDAIMFHVN QIAPTNYEDK AKALLELFED QYSRWFAHYF
IDVRVSLEQN RHEIYLQLLQ KLGSPLLDRH ILWETYRKAR ELLNSEATIN SASERAVLKT
VAMWLGRITL AQNKPIRMKE LSVKDLLIQG YDTKRLIVAI PFVCNLLASC RDSAVFHPPN
PWLVAILRLL SEFYHFGELR LNMKFEIEVL FSKLGIELDS FEPSNLLRMH VPPPPAQPEI
PNRLDLELQR ATSELMNGSQ RLGDLPGNEA YARIQQLQTE QAVQAAQDAL ARRVDELIAQ
LPEYLVFNQD YPIFTAPTLK RIVHHSIDRA IREIITPVIE RSVTIAGISS RDLIQKDFGT
EPDAIKMRQA AHMMVQNLAG SLALVTCKEP LRSSMIANVK SMLEQNGYTD ETMPDAMIAG
VVNQNLDVAC AVLKKAAMEK AAKDIDVNLA PQYAARKAHQ NSRSTAPFWD SASFGVAISH
TALPDPLKLR PGGLTPQQFR VYEDFGEPTR MLSSHPAANG DYLSASYQNL TLNDGLVPAE
IKTGPSPRHG FVQDVVEAPE IVASPRAIPP QTSIDKFHEV AAEIQKIVSQ THVPSISALP
ADHELRDLIR GIVIIANQSV HRENTTLAIA QKVVQLLYRS TVQLDREVYV YLLQQLCDLS
AKVDKEVKQW LIYAEDVRKL NVPVTVTLLR AQSIGVQELD VALSHIIIRS YPSEILDFVT
QLIRECSVSD IAFLPRQAFS HSLASLLKAQ EDGHATAQVD SLLEELRGPR EPQSSIEGDH
SKTVIDSKLQ ERLAHYFLEW VRVCSSSKDP EVPFVPYITF LQKEGILSGE DVSSAFYRTA
INTAVDLDTA KLTPDGSSRF YGVDALAKLI LFIVKNYGDK SGASSVGRAV YYYNKIITIM
SYSLVQRQLA MGDAFNQRPW ARFFTSMLSE LSTIEYDLPE TYIGCLKHLA NNLGITQPTY
APRFAFGWVS VISHRLFMPK LLSTQRDEGW PEFHRCVMWL LRFLAPFLQS DDMTPSSRSI
FKATIRLLML LLHDFPEFLV EFYHTLSTVI PPHCTQMRNI VLSAFPHSEA PLPDYYKRLD
QLVAEMQRFP TVRSDYIGAL ADGNVKAAVD QYVRTGVPTL PSIVAELKNR IAVKSLGPQG
STAVTWNHTL MHASVFYLGT TAVARTFQQT GVASFDPKTP EVAVLAGLAH AFDGEGQYYM
LNVVADQLRY PSAHTLFFIH FMLFLFGTSV QPELSSTIPE RIARILLERT IVKRPHPWGL
LVTFIELLDN EAYGFWKQPF VRAQDEVFRL FGQVRQSVAA RRELQ