Gene CNC05360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNC05360 
Symbol 
ID3256387 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006685 
Strand
Start bp1601625 
End bp1602969 
Gene Length1345 bp 
Protein Length304 aa 
Translation table 
GC content52% 
IMG OID638255754 
Product60s ribosomal protein l5-b, putative 
Protein accessionXP_569733 
Protein GI58265154 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0256] Ribosomal protein L18 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
AAAAACCCGA CACAATGCCC TTCGTCAAGG TCCAGAAGAA CGACGCCTAC GTGAGCGACA 
TCGCATGCTG GAGGACTATC GACGGAAACT GACTGTGAGA ATTAGTTCTC TAGGTACCAG
GTTAAGCCCC GAAGGAGGAG ACAGGGTAAG ACCGACTACC AGGCGAGGAG GGGTCTCGTC
TCCCAGGCCA AGAACAAGTA CGCTTCCCCC AAGGTGCGTT TTTTTTTCAA GTGCTAGGAG
AGGCAAGGCC AATAGATTGA CAATTTCTAC AGTACAGGCT TGTCGTTCGT ATCACCAACA
AGCAGGTGAT CTGCCAGATC GTCTACGCCA AGCTCCAGGT ATGTTACTTC GAATCTTGTA
AGGAAAGGGT TTATGATTCA TGTCTAATGC CCGCCTAGGG TGACGTTGTC TTCGCCCACG
CTACCTCCAA GGAGCTCCCC CGATACGGCA TCAAGCACGG TCTCACCAAC TGGACCGCCT
GTTACGCTAC CGGTCTCCTC GTTGCCCGAC GAGCCCTCAC CAAGCTTGGC CTTGCCGACA
AGTACGAGGG TGTTGTTGAG CCCACTGGTG AGCTCCAGCT CATTGAGCCC CTCGGTGACG
ACGAGCCCCG TCCCTTCAAG TGCTACCTCG ATGTCGGTCT CCGACGCACT TCCACTGGTG
CCCGTGTCTT CGGTGCCATG AAGGGTGCCT CTGACGGTGG TATCTTCATC CCCCACAGCG
AGAAGCGATT CCCTGGTTAC GACCCCGAGT CCAAGGAACT CGACGCCGAG GTCCTTCAGA
AGTACATTGT CGGTGGCCAC GTTGCCGAGT ACATGGAGTC TCTTGAGGAG GAAGACGACG
AGCGGTAAGT ATTTTGTTTT GTTTTTGTGA TCAATATCTG ATGAACCCCA CAGATTCAAG
AAGCAGTTCT CTTCTTACCT TGCCGACGGT GTTGGATCTG ACGACATTGA GGAGATGTAC
ACTAACGCCT ACGAGGCTAT CCGTGAAGAC CCCACCTTCA AGCCCACCGA GAAGGACGTC
GCCAAGTGGA AGGCCGAGTC TCTCAAGTAC AAGACTTTCA AGCTCACCAA GGAGCAGAAG
CAGGAGCGTG TCCAGGCCAA GATTGCCGCT TACAAGGCTG GCAAGCTCGA TGTCGAGGAG
GACGAGGAGT AATTCCATGG CGTCTGAAGG GTTTATGCAT TCAGGCATTT GGGATAACCC
GTTATTATGG ACAAATGTTG TAACATCACG CTTTTTGTTT CATATGCTGA TTGTTAAAAG
CATTGTGTTG CAAAACTGCT TAATGGCCTC GAAGTTTACC TGATTAACTT GTTCTCGTCC
TATAATGATA GTTTGTCCTT GACCA
 
Protein sequence
MPFVKVQKND AYFSRYQVKP RRRRQGKTDY QARRGLVSQA KNKYASPKYR LVVRITNKQV 
ICQIVYAKLQ GDVVFAHATS KELPRYGIKH GLTNWTACYA TGLLVARRAL TKLGLADKYE
GVVEPTGELQ LIEPLGDDEP RPFKCYLDVG LRRTSTGARV FGAMKGASDG GIFIPHSEKR
FPGYDPESKE LDAEVLQKYI VGGHVAEYME SLEEEDDERF KKQFSSYLAD GVGSDDIEEM
YTNAYEAIRE DPTFKPTEKD VAKWKAESLK YKTFKLTKEQ KQERVQAKIA AYKAGKLDVE
EDEE