| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNC05170 |
|---|
| Symbol | |
|---|
| ID | 3256197 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006685 |
|---|
| Strand | + |
|---|
| Start bp | 1549938 |
|---|
| End bp | 1551497 |
|---|
| Gene Length | 1560 bp |
|---|
| Protein Length | 429 aa |
|---|
| Translation table | |
|---|
| GC content | 47% |
|---|
| IMG OID | 638255735 |
|---|
| Product | conserved hypothetical protein |
|---|
| Protein accession | XP_569864 |
|---|
| Protein GI | 58265416 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTCC ATTTGGGTTT GACGGAGGCA CTGCAAGAGC GAGAACCCAA CATCAACGCC
AGCAGCAAAG ACTTATCACC ATTACACTTT GAACTTTATC GCCGATCAGA GCCAATCATG
GATATTGACG AAGAGTCTTA TCTGAATGCT GGGCCCTCTG CTCCCTCAAA GATTCCTCAG
GGAGGAGAAG GGGACCGGTT ACAAGGAATG AGCAAAAAAG CCATGAAGAG GGCAGCTAAG
CAGGTCCGTG GGTCTGTTAT ACATCTGTTC CGGACTTATA CAGGTATCAT ATAGGCCCGC
CTGGAAGAAA TCAAACCTTT AAAGCGCGCG GCGGAGAGAG AACGGCGTCG ACAGCGTACC
GCCCAACTTG CGGAAGGTTA TGCCGCTGGG ACACTCAGTG AAGCTGATAA GGAACTGGTT
GAGCGAAGGC GCAGGGTAGA GAAAGAAAGA AAAGAAGCCC AGAGAAGGAT AGAAAGTGGG
GACCAGGCGA ATGACTGGTT GGGAGGTGTT GTTATCGATC TAGGGTTCGA CGACTTAATG
ACTGACCAAG TGGGTATCCC TAGAAGGGGG AAAATAACTT CCTAATGTTT TTTAGGAAAT
TGCCTCAATG GCTCAGCAAT TGGGTTACCT TTATTCTTCC AATCGCACTG CAGAAAAGCC
GGTTAGAACT GTCATTCATA CGACATTCTC TCCTGCGGCA TCGCCAAGGC TCTGGCAACG
TATGGAAAAC TTCAATTGGC ACAAATGGAG CAGGTGCCAT TGGTGGGAAC AAGGCTTAGA
GACGCTCAAG TCCCAACTGG ACCCTTCAAC TTCAATTTTG TCTGTTCAAT CTGTAGTCAG
TAAAGAGACG CAAGACAAGG CAGGGATAGA TACCAAGAGT CTGCTGTCTC GTCTAACCGG
ACCTCAGGTC CCTGTTGACC TTCAGGCTGG CAAGCACAAG CTTGTATATC TCTCCGCGGA
TGCGGAAGAC GAGCTCTTGA GCTTGTCCGA AGACGAGATT TATATCATTG GAGGTATTGT
GGACCGAAAT AGACATAAGG CAAGTCTGAT CTGTTGCGTC TTGTTGTGGA CTCATTTTGA
TCATCTTAAT AGAATTTATG TCAAGGGAAA GCAGAACAAC TAGGTATTCG TACGGCCAGG
CTACCTATAG GCACTTTTCT AGAAATGCTT CCCACTCGAA AGGTGTTGAC TGTCAATCAG
GTAGGATTGT TGCTTACCTT CAAAAACGTC AGAGCTGATT CCCTCACTGT TAGGTTTTCG
ACATCCTTGT CAAATACCTT CATCTAGGCG ACTGGGCCGC TGCGTTTGAA GCCGTTATCC
CTATCAGGAA GTACGCTCCT GGTCGTAAAA CAAAAAGGGC GAAGACGGAG ACAAAAAGGA
ACGAAAAAGA GGAGGAAGAA GTCGAGTGCA CTAGTGCGGA GGGAGAAGAA GATATCGGAG
TAATAGAGGA ATCAGCAGAA GTTGACCCAG AGGACGTATT TTCGAACCAA TAATGTGTCT
CAATGGGGAC GCGCGACCAT TATGGCCATT ATTATGTCCT ATTTGACCTC ATATGGACCA
|
|---|
| Protein sequence | MKFHLGLTEA LQEREPNINA SSKDLSPLHF ELYRRSEPIM DIDEESYLNA GPSAPSKIPQ
GGEGDRLQGM SKKAMKRAAK QARLEEIKPL KRAAERERRR QRTAQLAEGY AAGTLSEADK
ELVERRRRVE KERKEAQRRI ESGDQANDWL GGVVIDLGFD DLMTDQEIAS MAQQLGYLYS
SNRTAEKPVR TVIHTTFSPA ASPRLWQRME NFNWHKWSRC HWWEQGLETL KSQLDPSTSI
LSVQSVVSKE TQDKAGIDTK SLLSRLTGPQ VPVDLQAGKH KLVYLSADAE DELLSLSEDE
IYIIGGIVDR NRHKNLCQGK AEQLGIRTAR LPIGTFLEML PTRKVLTVNQ VFDILVKYLH
LGDWAAAFEA VIPIRKYAPG RKTKRAKTET KRNEKEEEEV ECTSAEGEED IGVIEESAEV
DPEDVFSNQ
|
|---|
| |