Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNC05160 |
Symbol | |
ID | 3256722 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006685 |
Strand | - |
Start bp | 1548375 |
End bp | 1549743 |
Gene Length | 1369 bp |
Protein Length | 220 aa |
Translation table | |
GC content | 44% |
IMG OID | 638255734 |
Product | ubiquitin-conjugating enzyme e2-24 kda, putative |
Protein accession | XP_569863 |
Protein GI | 58265414 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG5078] Ubiquitin-protein ligase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTCTTCCACA CAGAGATCCA TTCTTAGCAG ACAATCTTCC TTCTCTATTG ACATAACTTC CCAAGCTCTA TCACCCCACT GGACACTTCA CCTGCGACAA TCCAAGTAGT ACTTCTCCAG TGATTCGAGA TGTCAGACGC ACGATTACGC CGAGTTCAGA AGGAGATCAA AGGTCTGTTT ACACATTCAA ACATCTGAAA ATCCTGCCGA CGCTTTCCCC ATACTTATGT GCATCCTTGT AGACTGCGCG AAAGATAAGA CCAGTGGAAT TGCCATTGAG AGTGAGTAAA TCCCATCAAC ACTGTTACTA GAGAAGGTTT GCTAAATGAT ACGTTCTAGT GATTGATGAC AACCCCTTCC ACCTTGTGGG AGCATTTCCC GGACCTGTGA GCCTGCTTTA TGATATAGTT CCATGTATAT ACTAATTTCT CTGCAGCCTG ATACACCTTA CGAAGGAGGT TACTACGAGG TCGTACGTTT TTCAAAATTC GAACGAAGTT CTTTTGGAGA AACCTCTGAT AATGTGCAAT TATGCAGGAC ATCCAGATTC CTGAAACCTA TCCTTTTCAG CCAGTGAAAA TGAAGTTCAT AACGTAAGTC ATTGTGGATC AAGACTGGAT TAGCTCGTTT GTATTGCTAA CAACGCTTGC TATTCAGAAA GGTGTACCGT GAGTAATGCC ATTTGTGTAG TTACCGGTAG AGGGCTGAAA TGATGGCCTA TCAGATCCCA ATGTTTCTTC CGCTAGTGGT GCCATTTGCC TCGGTACGTC CAGGTTTTAC TGTAAACTTT CTCCAGCTAA CGCATCATAT AGACATTCTC AAAGATGCCT GGTCACCAGT GAGCTTGCGA ATATAGTGCT CAAAATGATT AATAAATATT CTAACTATTA TCTTTTTAGG TACTCACTCT CAAGTCAACT CTTATATCGC TTCAATCACT TCTTTGCGAG CCAATCCCCA GTGATCCGCA GGACGCGCAG GTAGCAAAGC ACTACCTCAC CGACCGAAAT TCGTTCAATG ACACAGCCAA GCACTGGGCG CAGGCTTATG CCCAAGCCCC GGCACATAAA CAACAGAATG CCAGAGGAAA AGTTGCTACG GACGCTGAGT TGGCGGGATT GGCTGAGGAA CATGTTGTTT CTTTCATCGA TATGGGTTTC CCAAGAGACA AGGTTGTAAG TAACGTAACT AGCAGTATTA AGTGCTGTCA AGTGTCTGAC TGCCACAGAT TTCTGTCCTC AGGAGGAGAA ACTATCGAGG AAACAACGTG AATGCTGCTA CATACAACTC TGTGAGCACC AAGGCATCAT GGTACATTTT GCTTTGCTTA TATCTCTCCC AGTGTTTAGA AGAGCTTTTG CAGGACTAG
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Protein sequence | MSDARLRRVQ KEIKDCAKDK TSGIAIEMID DNPFHLVGAF PGPPDTPYEG GYYEVDIQIP ETYPFQPVKM KFITKVYHPN VSSASGAICL DILKDAWSPV LTLKSTLISL QSLLCEPIPS DPQDAQVAKH YLTDRNSFND TAKHWAQAYA QAPAHKQQNA RGKVATDAEL AGLAEEHVVS FIDMGFPRDK VISVLRRRNY RGNNVNAATY NSCLEELLQD
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