| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNC05050 |
|---|
| Symbol | |
|---|
| ID | 3256567 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006685 |
|---|
| Strand | - |
|---|
| Start bp | 1516673 |
|---|
| End bp | 1519135 |
|---|
| Gene Length | 2463 bp |
|---|
| Protein Length | 695 aa |
|---|
| Translation table | |
|---|
| GC content | 49% |
|---|
| IMG OID | 638255723 |
|---|
| Product | GPI anchor biosynthesis-related protein, putative |
|---|
| Protein accession | XP_570024 |
|---|
| Protein GI | 58265736 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.0701614 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGATCGA TAGTCTTCAG GCACAAGGCA CGTCATAAGC AAAAATGGGT GATATCATCA
CTTTTTCTTC TCGTGTCTTG GCGACAAAAC GTCACAGCTG GGATCTCTCG CTCGCACCAA
CTGCCATAAT CAACACATCC AGTACTCAAG AGGCCAAAGA ATGGCCCCCT TAGCATTACT
TACACCTCTC GTAGTTCGTA CCCTCCTCAC TCTCCCTTTT CCCCATACTT ACTTCCAGCC
GGACGAATTC TACCAAGCCC TCGAGCCAGC ACATTACCAC GTCTTTGGGT ATGGGTACCT
CTCTTGGGAA TGGCGAGACC TACCTTTGGC GGAAAGTCTC GCTCATACAG ACGTGTCAGA
ATTGCATGGA AAGCTGTGGG GTAAATTAGT GGCAGTGGCA GCCGGTGGCA GGATGAGGGG
CTGGGCTTGG CCTGGGGTCT TTGTAGTTAT CTATGAGGTG TTGAAGGGAT TGGGATTGGA
CAGAGGTCGG TTCCTTGTGA GTGTACATAT CTGGGATATT TTCTGTATAT ATATCTGATG
CACACCTCTA GACAATGGTA CCTCGCGCTG TAGGCATAAT CATTGCCGCT CTCACAGACT
ACTACACTTA TTGCCTCTCA TCAAAGCTTC TTGGGCACGG ATCTGCTCCT ACGGCTGTAG
GTTGAGACGG CGCAATGGGA CGAAGCATGA TTGCTAATTT GCGGAACAGC TATTTCTGTC
ATTGACTTCC CTTTTTAATG GCCATCTTCT CCCGCGATCC CTTTCAACCT CGCCTGAAAC
GCTCCTTACT CTCATGGCCT TATACTACTT TCCTTTCCCT GCCCCTGGAG TGCCAGAAGT
CTATGGTCTG CAAAATGTTA CCAATTTGAA GCCAATAGGA GCAAGTAAAA GTAGAAGAGA
AACAGAAGGA GGAGAGAAGG AGTTCATGAG AGTGGAAGAT TCTGACAAGA GTTCTTATGG
CGTGAACGAC TTGGACTACG TGGTCATAGA TAGAGCACCA CCGTTCGTAG TGGAGGCGCC
TCAGTAAGTC ATCTGGACTC ATGCCATTGG TAGTACTAAT AAAACTCAGG CACAAAGATA
GACTAGTCTT GTCCATCTGT CTTGCAACTC TTGCTCTGTG CATTCGTCCT ACAATGTTGA
GCCTATGGGC TTTCCTCGGT GCAAATCTTT TATGGCGTCG CTTCCAATCA AGTGGTTTGC
AGAGTTTGAT TGGCACCACG GCATTAGCCA TGTCAAGCAT GTAAGTTTTG AATCGCGCGT
TATCCACCCC CCCCCCCCCC CTACTGATAC AATTGAAGCC TCTGTACTGT GGCTGGGTCC
ACCGCCATCG ATTACTTGAT GTCAGGCCGC CTCTACGTTC CCCTACTCAC TTTCATCTAT
CAAAACGTTA TTGTCAATAT CTCATCATTT TACGGCTCGA CAGACCACCT CTATCACCTT
GTCCAGACTC TACCGATCAT GCTTTTCCCG CTATGGATCT GGTGGGCCAA AGGTTTTATT
GCGTGTATTT TACCCGCCAG TCTTTTACCG GCTCAGCTCA ACAAGTTTGA CAAGCCAAAA
GGATTGAAAA TCCTGGCCAA AGCAATCAGC TTTACAATCG CCGTTCTCTC TCTCAGCCCT
CATTCCGAAT GGCGCTTCCT TCATCCTCTC CTTCCACCTC TTCTTCTTTA CACCATCCCG
TCTTTCTCCA TCTCGTATAC TCCTACTGTC CTAGGGGCAT ATTACCCAGT CAGATCATTT
CGACAATATC TGCGCATGGA CAAGGTTCCA TTTTACGTCA TCCTACTTTC AGGGATCGTG
CCGTTCATCT ATCTAAATGT TTTCCATGGC GCAGCGCAGG TGGAAGTGAT GAACATCTTG
AGAAGGGGGG ATTTAGGGAA TGTGACTAGC CTCGCCGTCC TGGCGCCTTG TCATAGTACG
CCTTGGATGA GTCATTTGCA CAAGGATATT GAAGGATGGT TTTTGACATG CGAGCCTCCG
GTGGGGTGAG TCTTACCGTG TTGAACAATA CAAGTCTCGT AAACTACAAG TCTCGTAAAC
TGACAGTCCA TCTCAGTGTG GATGCGAAAA TGCATAGGAC CCAACAGGAC TGGTTTTACT
CCAATCCAGT CCAGTACCTT TCTTCCGTCT TCCCATACCC TCCTTCTCAA CTTCACGACA
TTTCTTACGC ATCTTTCAGC AAGACATATC CCTCGCACAT CATCCTCTTT GGCGAGCTTC
TTTCGCGACG AGGCATCGTC TCTGAAACGG TGTTGGAGAC GGGCGAAAGT CAGCCTGTGA
TAACCACACG GGAAGGGGAT GTGACTGGGG AACTCGAGAG CTTGGGTTAT CAAGAAGTTT
GGAACGGGTG GAATGGTTTT GATTGGGCCC AGGATGAAGA AGAGAGGAAA GGAGGTGTGA
GAGTATGGAG GCTGGCATGA GGTCTGAGAT GGCTGCAGGC TATTTGACAC GATGGTTGTA
CTA
|
|---|
| Protein sequence | MRSIVFRHKA RHKQKWLGSL ARTNCHNQHI QYSRGQRMAP LALLTPLVVR TLLTLPFPHT
YFQPDEFYQA LEPAHYHVFG YGYLSWEWRD LPLAESLAHT DVSELHGKLW GKLVAVAAGG
RMRGWAWPGV FVVIYEVLKG LGLDRGRFLT MVPRAVGIII AALTDYYTYC LSSKLLGHGS
APTALFLSLT SLFNGHLLPR SLSTSPETLL TLMALYYFPF PAPGVPEVYG LQNVTNLKPI
GASKSRRETE GGEKEFMRVE DSDKSSYGVN DLDYVVIDRA PPFVVEAPQH KDRLVLSICL
ATLALCIRPT MLSLWAFLGA NLLWRRFQSS GLQSLIGTTA LAMSSILCTV AGSTAIDYLM
SGRLYVPLLT FIYQNVIVNI SSFYGSTDHL YHLVQTLPIM LFPLWIWWAK GFIACILPAS
LLPAQLNKFD KPKGLKILAK AISFTIAVLS LSPHSEWRFL HPLLPPLLLY TIPSFSISYT
PTVLGAYYPV RSFRQYLRMD KVPFYVILLS GIVPFIYLNV FHGAAQVEVM NILRRGDLGN
VTSLAVLAPC HSTPWMSHLH KDIEGWFLTC EPPVGVDAKM HRTQQDWFYS NPVQYLSSVF
PYPPSQLHDI SYASFSKTYP SHIILFGELL SRRGIVSETV LETGESQPVI TTREGDVTGE
LESLGYQEVW NGWNGFDWAQ DEEERKGGVR VWRLA
|
|---|
| |