Gene CNC05040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNC05040 
Symbol 
ID3256834 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006685 
Strand+ 
Start bp1515223 
End bp1515922 
Gene Length700 bp 
Protein Length179 aa 
Translation table 
GC content56% 
IMG OID638255722 
Productendoplasmic reticulum protein, putative 
Protein accessionXP_569799 
Protein GI58265286 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2897] Rhodanese-related sulfurtransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.575301 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCTTCG CTCGTACTTT CGCCCAACGC TCCCTCCGCA CCCTCGCCTC CTCTGCTCGA 
CTCAGAGCTC CCCTCCCCGC CAAAAGGGCC TTCTCCACCG CCCAGCCTCT CAGGATGGTC 
GTCTCCCAAG CCAGGTATGA CGCTGCAAAC CGCAAGCCCT CGCAGTGGGC CAAGGACCCC 
ATCGTCACTT ACGAGGAGTT GAAGCCCATT ACCCAGCAGC CTACTGATGT GCGTTTTGTG 
CTTGACAGCA GGCCGGGCCA CCGCAGTCGC TGACCGTCTG TATAGAATAT CCTTTTGGTG 
GACGTGAGGG AGCCTGACGA GGTCGCTCTT GGGTCTATTC CTTCTGCCGT CAACTTGCCC 
CTGTCCAAGC TCAAAGAGGC TTTGGACTCC CACTCTAACC CCGGAGACTT CCAAAGGGTA 
CGTCAAACTC TTACAAGCAG CTAGCTGTCC TGGCGCAAGT CGTTTAAATG TAACATTTGG 
ATCTAGGAAT TCGCCTTCCC CAAGCCTCAG CCCGAGCAGA ACATCATCTT TTTCTGCCGT 
TCTGGCAGGC GTTCCGCTTC TGCGGCCGAG ATTGCCAACG ATAAGGGCTA CAAGAGCGTG 
AGGAACTATG TCGGAAGCTG GCTGGATTGG TCCAAGCGCG AGAGCCAGGA CAAGGACGAG 
GATTAAAAAA AGCGGTAGCT TATGTCATGT TGTTGGGATC
 
Protein sequence
MSFARTFAQR SLRTLASSAR LRAPLPAKRA FSTAQPLRMV VSQARYDAAN RKPSQWAKDP 
IVTYEELKPI TQQPTDNILL VDVREPDEVA LGSIPSAVNL PLSKLKEALD SHSNPGDFQR 
EFAFPKPQPE QNIIFFCRSG RRSASAAEIA NDKGYKSVRN YVGSWLDWSK RESQDKDED