| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNC05000 |
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| Symbol | |
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| ID | 3256218 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006685 |
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| Strand | + |
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| Start bp | 1505126 |
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| End bp | 1510394 |
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| Gene Length | 5269 bp |
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| Protein Length | 1526 aa |
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| Translation table | |
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| GC content | 49% |
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| IMG OID | 638255718 |
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| Product | golgi-specific brefeldin a-resistance guanine nucleotide exchange factor 1 (bfa-resistant gef 1), putative |
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| Protein accession | XP_569791 |
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| Protein GI | 58265270 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5307] SEC7 domain proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.106123 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGCCTA CAGACCTCCC TCCGACGACG CTTCTCCTTC AGGAGGTGCA GTCCGTCACC
TCTGCCATGC GCAGGAACCA GAGATGGGCC TCATCTTCGA CGTCCTACGG CTCATACCCG
ACCCTTCCAC CGTCTCTGAG GAGCAAAAAC AATGGCCTCG CGGGAGCAGG TAGCAGGCGA
GGTCGAGCAA GCTTGGATAC GGGAGACAGC GTCGACCTTA TGGATGGGTT CGTGGAGCTC
AGAAGACTGC TTGGCGGTGT GAAAGGTAAG AATAATAATA CTCGGTAGAT GCAATTTGTG
TGCTGACGAT GAGGTAGACA TTACATCGCT TGCACCTATA GACCTGTGTG CTCCATTTTT
GTCATTGATA AGGTCATCCT CAACTTCCGG GCCCATCACT GCCCTCGCTT TAACTTCCCT
TTACTCCATA ATCAATGCCG TTCTTCCCCT CTACCTTACG CCCGTACCCA CAACCTTTTC
CCCATCCACA CCTCTCCAGC TGGCTCTGGT TCACATCACT TCGGCAATTT CCCATTGCCG
ATTCCCAAGT TCGTCTCCCC AACAAGATGA GCTCGTTTTA CTGAAACTTT TGCGGGTGAT
CGAGTCATTG GTCATTCCTA TGGCCATGCC GACGACCGAA GGCACCGTGC AAATGGGCAA
TCTCCTCGAC CATATGGGCG ACGAAAGTGT CTGTGAGCTT TTGGAGGTAG GGCTCGGTAT
GCTAGCACGT GCACGTCTCG GTGAAGGAGT TAGAGCGACA GCTCAGAGCT GTGTGCAAAA
CATTGTAACG AGCGCCTTTA GGCGCTTAAA AGGATTACAA AAAGAAGATG TGGATAAGCT
GCTGGAAGAT GCGAAACACC ATGAAGAGAA AATCAAGGTA AGCAGCAAAA AGATTGAGTC
TGTCGGACAG AAGGAGGAAC ATCCGGACGC GAAACAAGAG AAGCAAGATG AGATGATAAC
TGAATCGGAG GAGAAACCGA CAGAGCCTCA GGTGAACACC CCAATGTTCA CGCCTTATGG
ACTTCCTACT ATTCTAGAGC TCCTTAGAGT CCTTATTGCC TTACTGGACC CGAACGATCA
AGCTCATACA GACTCGATGA GGTTTTCGGC CCTTGCTATT CTTAATACTG CCCTGGAAGT
GGGAGGTCTA GGTCTAGGTA ACTGGCCCGA GTTGAGGGAA GGTGTAACGG ACGAAGGATG
CAAGTATCTT TTCCAGGTAT GTTTCCCTCT CAATCTATTT GCCGCACCAC TAACCATGGC
TCAGCTTACC CGAGCCGATT CGCCATCTCT CCTCGCTCAA TCTCTCCGCA CTACGTCAAC
TCTTTTCTCC ACCCTTCTCC CCCACCTCAG ACCTCAACTT GAATTGTTCC TCTCTTACCT
CATTGACCGT CTCACACCTT CAAATCCTGC TCCTCTTCCT CCCCAGTTTT TGAATCTCCG
ATCAGATTCT CGCCCTAGTA CGCCTAGTGT GAAGACCGAA GGCCGGGTCA CCCCTGTAGC
GGATGCTTCC ACCATCGAGT CCTCCAGCCC CGCTTCAACT CCTAAACCCG TCAGCCTTCT
TCCTCCGGTC CCCAATGAAA CTCGAGAACT CATGCTTGAC TCTCTTACGC AAGTCGCATT
GCGTCCAAGC TTCATGGTAG ACTGCTGGGT CAACTTTGAC TGCTCGACGG ATAGTGAAGA
CTTGTTTGAG AGGCTGATAG CTTTCTTAAC ACGTGGAGTA TATCCTCATG GCCCCCCAAA
GAGTGACGGA TCAAGTCACT TTTTTGAAGG CCTCGATAGC ACACAGCTTT TATCACTGGA
AATTCTCTTG GCTTTTGTGT CATCCATGGC CGATAGATTG GAACAGGGCG ATGAGACTTG
GCCCTCAGAA GCCCCGACCA CCGCCAGTCT CAAAGAAGCA AAAGGGCGCA AAGCTGTCAT
CCTCACTGGT GCTGCCTTGT TCAACACAAA ACCCAAGAAC GGTCTTTCAT TCCTCGAAGA
GAAAGGCATC ATCGTTCCTG ATCCCGCCGA CGAGGGTACC GACGAAGAAA AGCGTCATCT
GGCTATCGCT CGTTTCCTTC GTCATTGCTC CCGTCTTGAT AAGAAACTTT TGGGCGAATT
TATTTCACGT CCCGACCAAC TGGGCTTGCT CAAGGCTTAC ATCGGCTTGT TCAACTTTTC
TGGTAAAAGC GTTGCAGATG CCATGCGAGA GTTGCTAGAA ACCTTCAGAC TGCCTGGTGA
AGCACAGCCG ATCGCCAGAA TCACAGAAAC CTTTGCGGAG CATTTCTTCT CCTTTTCTCC
ACCAGAGATC GCCGATCAAG ATGCAGTGTA TGTGCTGGCG TACTCAGTGA TCATGCTGAA
CACAGACTTG CATAACCCAC AGAATAGAGT ATGTCTTTCT ACAATTCCCT ACTTGAGCAT
GGTACTGACA TCAGAAATAG AAACGCATGA CAGTTGAGGA CTACAGAAAG AATCTCAGAG
GTGTGAATGG CGGCAAGGAC TTTGATCCGG CATATCTCGA AGGGATTCAT GAATCTATCA
GAAAGAGAGA GATCATTTTG CCAGAAGAGC ACGCCGGTCA ACATGGTTTT GAATATGCTT
GGAAAACATT AATGCAGCGC TCTCGTACAT CAGGTAAGTC CCAGCCCTCC TTACCCTCGA
CCTCCGTTGA CAGGTGTCTA GGTCCGATGG TCATTTGCAA TACTTCCATC TTCGATGAGC
ACATGTTTGG CCTTGCTTGG CGTCCACTAA TTTCTTCTAT CGCCTATGCC TTCACCATGT
CTGCTGGAGA CGAGCACGTC ATTCAAAAAG CCATCACTGG TTTCCGACAG GTTGCCTCTC
TCGCTTCTCA CTACCATCTT CCTGACGTGT TTGACACTAT CGTCCAGTCA TTATCGAGTG
CCACTGGTTT GTTGGACGAT ACGGAGGAAG GATATCAGAT GTCAAATTAT CCAGTGGTTG
AAAAAGAGGG GCAATCGTTG ACGGTCTCGC CATTATCAAT CAGGTTTGGT CAGAGCTATC
GCGCACAACT CGCCACGGTC GTTCTTTTCA CCATTGCTAA CGGTAACGGC TCAGCGATCT
GCGAAGGATG GCACCAGATC TTCGAAATGT TTCAGACTCT CTTTCTTCAT TCTCTCTTAC
CTGCACGCAT GCTCCAAATG GAAGATTTCT TGGCGGGCAC GTCCACTATT CCGATGAAGA
CTGCTGTGCC GCATGCCCAA CTAGATAGAA GGCCAGAAGG AGGTCTACTC TCAACTTTAT
CCAGCTATCT GTTAAGTCCA TATGGGACCG GCTCGGAAGG TGTGGTGGTT GAGACAAGTG
AAGAAGACGT AGAGAATACT TTGGTGGCGG TAGATTGTTT AAGCTCGTGC AAGCTTGAAG
AATTGTACGC AGAGATTTTG TAAGTAATCG TTCCTGCCTG AATGACTTTA GACACTGACG
ACAGACAGGA ACCTTCCTGT AGATGCTCTT ATCCCCGCGC TTCGCGCTAT TCGAGCGTTA
GCAGAGAGTC GCACGACTGA TAAACTCAAA TCACGCACTG TTCAACGGGT CGAGACTGGG
TCACCTGTGA TCTCGCCCAG GTTTGAGGGT CAATTGCCTT ATGATCCAGC TTGTGTCTTC
CACCTGGAGA TGATGGTCAG CCTTGCCAGT AGAAACAAGC AAAACATTGC CGAAACCTGG
TAAGTATTTC TATCATTGAG TGGGAAGCAC AGGCTGACCT TAATGTAGGC CAATTATCTT
TGAATATATC TCTGAACTTC TGTCTTCAGC GCAGTCCTAT AGTGTATTGC TCATCGAGCG
AGCTGTCGTT GGTTTGTTAC GTCTTTGTCT GGTCGTATCC GAGCAAGTGA GTTAAGTTTG
TCACGAGATT GTGAATCAAC GCTTACATTT TTTGCCGTAG CCTGAACTAC GAGATCAACT
ATACATCGCC TTAGATGTTC TACGCTCTCT TCCTTCTACA GTCCTCAACG CTGTCTCCGA
ACAGCTCATG GCTGGCGTAG CTCTGGTCCT TGAGAAAGAC GCTACCGTCA TCAAATCCCA
GACAGAATGG AACCTTGTTA TCGCCCTTTT CAGAGCTACT GTTGCCCATC CCGAAGCCAG
TAAAGTTACT TTGGCAATTG TGCAAAAGAT GGCAGCTTTA CCTAAGCAGC AAGAAGGTGA
AAATGTTGGG GAGGGCAAGG GAACGGGTTT GACAGTGGAC AATTATGGAG GAGTAGTAGC
TTTGTTGGAT GAATTTGCCA CTCAGGCCGG AGCAGCAGCC GCGGGAAGGC AGCAGCAACA
GAGGAGATCA TCAGTGGGAC CGCAATCTGG AAGCTTGTGA GTGATCTGTT CGACGATATT
ACATCCTTGG GCTGATGAGT TTATAGAGGG CCGACAGTTG AGCGAGGTCT AGCGGCTTTG
GATTCATTAT ACGAGCTCAG GAACGTTATA CCCGCCCTTA TGGCGTCAAA TAATCTGGAA
GAGCAGCAAG GTGAGTACGA TTGAATGAAT TTCTTGGTTA GGGGCTAAGA GAATCGTTAG
CGTTCAACAC CTTCTGGCTA CCACCTCTCC TGGTGATTGG CAAGCAATGC ATCAATGGCT
GTCGTGACAT CCGTCAGCGG GCCATTACTT ACCTCCAGCG CCTCCTATTA TCTCCGCAGA
TCTTGTTGGG TAATGAGTCC ACCCTTCCTA TTGTGTTCGA CAGGGTTCTC TTTCCGGTGC
TAGAAGAGTT ACTGAAGCCG CAAGTGTATG AACGTGACCC CAAGGGTCTC TCAGAAACAA
GGCTAAAGGC CGCTACATTG CTTTGCAAAA TCTTTCTGCA GTATGTCGTC AGACTCGTAG
AAAGTGGAAG CAGTGAGGCC GTGACTGGTC TTTTTGTGAG GGTACTGGAC AAGCTGGAGA
GATTTATGCG TGGAGAACGG GATCTCTTGG TGTGTCTCTT CTTGTTCATG AATATCTAGA
TCCAGCTTAC GGGTGTCTCA GAACGAAGCA AGCGAATCTT TGAAGAATGT GGTGCTTGTT
ATGCACTCAT CGAATCTTCT CATCCCCCCT CCGTCGTCCG GCAGCCCGGA TGAACGCACA
CGAGACCAGA AGGGCCTTTG GGAGAAAAGC GCACAGAGGA TTGAGAGAGT ATTGCCTGGA
TTCTTGAGGG AGGCTATACC GCCATCTGAA CCCCCGCAAG TGCAGAAACA GGTTGGGCAG
CAAGTAGAGC AGTCTTAGAG TGTATCAAAA TATGAAGTCA GGTAACGGAC ACAAGGTAAT
AATCGCTTGA GCACTTGTAC CTGTACTGTT TGTAGAGCTT GTCTGTGAT
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| Protein sequence | MPPTDLPPTT LLLQEVQSVT SAMRRNQRWA SSSTSYGSYP TLPPSLRSKN NGLAGAGSRR
GRASLDTGDS VDLMDGSSST SGPITALALT SLYSIINAVL PLYLTPVPTT FSPSTPLQLA
LVHITSAISH CRFPSSSPQQ DELVLLKLLR VIESLVIPMA MPTTEGTVQM GNLLDHMGDE
SVCELLEVGL GMLARARLGE GVRATAQSCV QNIVTSAFRR LKGLQKEDVD KLLEDAKHHE
EKIKVSSKKI ESVGQKEEHP DAKQEKQDEM ITESEEKPTE PQVNTPMFTP YGLPTILELL
RVLIALLDPN DQAHTDSMRF SALAILNTAL EVGGLGLGNW PELREGVTDE GCKYLFQLTR
ADSPSLLAQS LRTTSTLFST LLPHLRPQLE LFLSYLIDRL TPSNPAPLPP QFLNLRSDSR
PSTPSVKTEG RVTPVADAST IESSSPASTP KPVSLLPPVP NETRELMLDS LTQVALRPSF
MVDCWVNFDC STDSEDLFER LIAFLTRGVY PHGPPKSDGS SHFFEGLDST QLLSLEILLA
FVSSMADRLE QGDETWPSEA PTTASLKEAK GRKAVILTGA ALFNTKPKNG LSFLEEKGII
VPDPADEGTD EEKRHLAIAR FLRHCSRLDK KLLGEFISRP DQLGLLKAYI GLFNFSGKSV
ADAMRELLET FRLPGEAQPI ARITETFAEH FFSFSPPEIA DQDAVYVLAY SVIMLNTDLH
NPQNRKRMTV EDYRKNLRGV NGGKDFDPAY LEGIHESIRK REIILPEEHA GQHGFEYAWK
TLMQRSRTSG PMVICNTSIF DEHMFGLAWR PLISSIAYAF TMSAGDEHVI QKAITGFRQV
ASLASHYHLP DVFDTIVQSL SSATGLLDDT EEGYQMSNYP VVEKEGQSLT VSPLSIRFGQ
SYRAQLATVV LFTIANGNGS AICEGWHQIF EMFQTLFLHS LLPARMLQME DFLAGTSTIP
MKTAVPHAQL DRRPEGGLLS TLSSYLLSPY GTGSEGVVVE TSEEDVENTL VAVDCLSSCK
LEELYAEILN LPVDALIPAL RAIRALAESR TTDKLKSRTV QRVETGSPVI SPRFEGQLPY
DPACVFHLEM MVSLASRNKQ NIAETWPIIF EYISELLSSA QSYSVLLIER AVVGLLRLCL
VVSEQPELRD QLYIALDVLR SLPSTVLNAV SEQLMAGVAL VLEKDATVIK SQTEWNLVIA
LFRATVAHPE ASKVTLAIVQ KMAALPKQQE GENVGEGKGT GLTVDNYGGV VALLDEFATQ
AGAAAAGRQQ QQRRSSVGPQ SGSLGPTVER GLAALDSLYE LRNVIPALMA SNNLEEQQAF
NTFWLPPLLV IGKQCINGCR DIRQRAITYL QRLLLSPQIL LGNESTLPIV FDRVLFPVLE
ELLKPQVYER DPKGLSETRL KAATLLCKIF LQYVVRLVES GSSEAVTGLF VRVLDKLERF
MRGERDLLNE ASESLKNVVL VMHSSNLLIP PPSSGSPDER TRDQKGLWEK SAQRIERVLP
GFLREAIPPS EPPQVQKQVG QQVEQS
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