| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNC04880 |
|---|
| Symbol | |
|---|
| ID | 3256551 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006685 |
|---|
| Strand | - |
|---|
| Start bp | 1475660 |
|---|
| End bp | 1477468 |
|---|
| Gene Length | 1809 bp |
|---|
| Protein Length | 474 aa |
|---|
| Translation table | |
|---|
| GC content | 46% |
|---|
| IMG OID | 638255707 |
|---|
| Product | conserved hypothetical protein |
|---|
| Protein accession | XP_569773 |
|---|
| Protein GI | 58265234 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CTTCGTCATT TGTTCACTTT CTATCCTTCA GAAACTCAAC AACACTTGGC AGGATTATCA
TGAAAACACC CAGACGAGTT CCCTGGACCT CTCAAACAGA GCTAACAGAG CTTTATGACA
TGCTCTTCTC GCCTGCCGCG GATCTTGAGA GCAGACGACG AGGTTTAGCA AGAGTAGGTG
TTTATGTATT TCGCGGAGAC CCTCTCTCTC ATGTCCCATC GAACAAGTCC GCTGACAGTG
ATTCACAGAT GAGCATATAC ATTTCATCAC CATCATGTCC TTCTTTCATA CATCTTCTTC
ATTCTCTGGT TGCTGCGGAA CTCTTACCTT ATCCCCCGCC TCGAGGAGCC GAAGAGTCGC
AGAGGATGAG AATGATGATG GGTATGGCAA TTGTACGATT TGTAAATGGG ATGGTCGACC
CTCTACAGAC TGGTGCGTCC TGAAATCCTT ATACGAGGTG TCCTACGGCT AATCTATCCA
TGGAAAACAG GTTCGTATGC CCGTCCCATA TCTCATCTTG CAGCCACCCT CGGTCTTCCT
CCTTCTTTGA TCGCCCTTCG ACATCGAGCA ACCCACGAGG ATCTTCCCCC TCTACCATTA
CTGCATCAAG CTGTGACGCA ATGTATCGTA TATTTGCATC AAAACTCATT CGTCCCACTC
GTAACGTCCT CATATGGCTC ACCACCACCG GCAGTTTTAG AAAGACAGCA GGCAACTGCG
AAGCGAATAG ATGGCCTCTT GAAAAAGTGG AAAAAAATCG CGAAAAACAG ATTGAGAGAT
AAAGAAGTAA GAGAGGAGGA CGAAAGCGCG ATTGAGATGA AGAAGGTCAG AAAAGAATTA
GAAGGAGAGG TTGCTGGAGC GAGCGGCATT GTCAGAGGTT TAGTGGAAGT AGGCAGCCTA
GTGCCTCTTG CTAAAAGGTA TTTGGGCTCT CTTCAATATC CGATCTCCGA TGCTGACTTT
CTATAGAAAA CGGGCGTCGC AGAAGGCAGT TTCTCCCCCA CCTCCATCTC TCAAGATTTG
GGAACCTCTC TTAACCCATT TGTCCGACAC TACCATGCCA GACCTGTCCT CAACATTATC
TGTCCAAATC CTTGATATTC TTCTCAACCC ATCTACAAGC CCTATTCTTT CTCAAGAGCC
TCAAGGGTTT AATCCCTCGG AGGAGTTGAT CTCGTTGAAT GAAGATGAGA AAGATACATC
TGGAGAAAGC GAGTCTTATC GATGGGGTTT GGCAGTGTGG TTAATCTATT TTTGGGGAAA
CAGTTCATCA GAGAGCGCGT TGAAATTGAC ACAAGAAGAG AAGAAAGCCA TTTACCGAAG
GCTGGCTCTC ACGTTACTGC ACAAATACGA CGATCCTATG TGAGTATCAT CAAGGACATG
GTAAACAATG ATTAAGGCTA ACATCTTATG CAGTTTAACA CGGTTACATA AGTGTTTGGC
CGAGCTTGAC GAGTCTCTCC GGGACATCGC AAATGATCTT ATCGTTCTGT CAAAGACGGA
TGCTCGCGAT AATTTAACAG ATAGCGATAT GGAAGTTGAT GTCATTGAAA GCCGCCTTCA
GGCAATGGAG AAGCGATTGG TCGAAGTTGA AGGTCGCGTA TGTTGAGTTT CGTTTGTTAA
AAAATTAAAA CTGACTATTT TATCGTTAGT CTGCACCAGC CCAGATCAAC GATGCAAATG
CTGCGCCAGT CATAGAGTCA GCATCATTAC CTGGCTGGCG TCGATTGACA CCTCAAGAAT
GGACACCATG CCCCATCGGA ACATTTATAT AATCATTTGA CTTATTTACA AGTTTGCTTG
GCATGACGG
|
|---|
| Protein sequence | MKTPRRVPWT SQTELTELYD MLFSPAADLE SRRRGLARMS IYISSPSCPS FIHLLHSLVA
AELLPYPPPR GAEESQRMRM MMGMAIVRFV NGMVDPLQTG SYARPISHLA ATLGLPPSLI
ALRHRATHED LPPLPLLHQA VTQCIVYLHQ NSFVPLVTSS YGSPPPAVLE RQQATAKRID
GLLKKWKKIA KNRLRDKEVR EEDESAIEMK KVRKELEGEV AGASGIVRGL VEVGSLVPLA
KRKRASQKAV SPPPPSLKIW EPLLTHLSDT TMPDLSSTLS VQILDILLNP STSPILSQEP
QGFNPSEELI SLNEDEKDTS GESESYRWGL AVWLIYFWGN SSSESALKLT QEEKKAIYRR
LALTLLHKYD DPILTRLHKC LAELDESLRD IANDLIVLSK TDARDNLTDS DMEVDVIESR
LQAMEKRLVE VEGRSAPAQI NDANAAPVIE SASLPGWRRL TPQEWTPCPI GTFI
|
|---|
| |