Gene CNC04420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNC04420 
Symbol 
ID3256327 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006685 
Strand
Start bp1340038 
End bp1341850 
Gene Length1813 bp 
Protein Length466 aa 
Translation table 
GC content50% 
IMG OID638255663 
Productargininosuccinate lyase, putative 
Protein accessionXP_569694 
Protein GI58265076 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0165] Argininosuccinate lyase 
TIGRFAM ID[TIGR00838] argininosuccinate lyase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.000251148 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CTCTACCAAT CCCTTCCCAT CTCTAGCGAC TAACAATGGC CAGCGAACAG GATTTCACAA 
AGCGAAAGCT CTGGGGGTAG GTCATCCTCT TCGTTCATAG GCATGCCTGA CACAAGGCAC
AGTGGCCGAT TCACCGGCTC TACCGACCCT TTGTGAGTTC TCTTTACTGC TTCTTATCTC
GGCTCTGATT CTGGACAGGA TGCATGAGTT CAATCAGTCA TTGAAGTACG ACAAGCGCAT
GTACGCTGCG GATGTCAAGG GCTCTATTGC CTTCTCCAAA GCTTTGCTCA AAGCTGGCAT
CCTCAATGAG CACGAGCAGC AAGAGATTGC TAGGGGTTTA ATGATCGTCG AATCCGAATG
GGCCGAGAAC AAGGTGAGAG TCCACGGATT GGACATAGTG GATGTCTCTT GCTTATCCTC
GTATCATAGT TTGTCATCCA ATCCGACGAT GAGGACATCC ACACTGCCAA CGAGCGGAGG
CTCAGCGAAA TTATTGGCAA GGACATTGGT GGTAAGCTGC ACACTGGCCG AAGCAGGAAC
GACCAAGTCG CTACCGACAT GCGAATCTGG CTTGTAAGTA ATTCTTTGAA TTCCACAGGT
CCATGCTCAC TGAAGGGCGC TACAGATGGA GGAGACCACC AGGGTCGAGG GTTACCTCAA
GGACCTCCTA AACGTCATGG TCTCTCGAGC TGAGAAGGAA GTTGACGCTA TCCTCCCTGG
TTACACTCAT CTTCAGCGCG CCCAGCCTGT CAGGTGGTCC CACTTCCTCC TTTCCCATGC
TCAGTCCTTC CTTGGTGATC TTGAGCGTCT CAGACAGCTG TACCCCCGTA TTTCCGTTCT
TCCCCTCGGC TCTGCTGCTT TGGCTGGAAA TCCTTATTCC CTTGACAGGG AGCTGTTAAG
GCAAGAGCTC GATTTTGAGA GCATTGGAGA GAACTCTATG CACGCAGTTG CCGATAGGGA
CTTTATCGTG GAGTGGTTGC AGTGGGCCAG TTTGACTCAG GTGCACATGA GTAGGATGGC
CGAGGACTTA ATCATTTACT CTAGTGCCGA ATTTGGGTTT GTCCAGCTCA GTGATGCGTA
CAGGTAGGTT GGTCCTTATA CCTTTATGGA CATTAGCTGA TATCACACCA CATTAGCACT
GGCTCTTCTA TCATGCCTCA GAAAAAGAAC CCTGACTCCC TTGAACTTCT CCGAGGCAAG
GCCGGTCGAA CATTCGGTCA AATGGCCGGT TTCATGATGT CCCTCAAGGG TGTCCCCTCA
ACCTACAACA AGGATTTGCA AGAAGACAAG GAGCCCTTGT TTGATGCAGT TGACACCGTC
TCCGCCGCAT TGAGGATTGC CGAAGGTGTG CTTGCTACCA TGTCTGTAAG TATATCTATT
ACAAGGATTT AGATTGTTGG GAATGCTCAT GTGACCATGA AACAGATTAA TCCTGAGAAG
ATGGCTGCTG CCCTTACTAT GGACATGCTT GCCACTGATA TTGCCGACTA CCTCGTCCGC
AAGGGTGTCC CCTTCCGTGA GACTCACCAC ATCTCTGGCC GTTCGGTCGC CCTCGCCGAG
AAGACCAACT GCCAGATTTC CGACTTGACC ATGGAACAAT GGAAGGAGTT GGACGAGAGG
TTTGACGAGA CTGTCATGGA GGTCTTTGAC TTTGAGACAA GTGTGGAGAA GAGGAACGCC
ATTGGTGGTC CCGCGAGAAG CATGATTGCT AGACAGGTCG AGGTGGCCAG GCAGAGGATT
GGCAAATAGA ACCAAAACAT TTGGAAGTTT AAAAGGTCGG CTTCACCTAT AGTTTATGCA
TCTGTATACA ACA
 
Protein sequence
MASEQDFTKR KLWGGRFTGS TDPLMHEFNQ SLKYDKRMYA ADVKGSIAFS KALLKAGILN 
EHEQQEIARG LMIVESEWAE NKFVIQSDDE DIHTANERRL SEIIGKDIGG KLHTGRSRND
QVATDMRIWL MEETTRVEGY LKDLLNVMVS RAEKEVDAIL PGYTHLQRAQ PVRWSHFLLS
HAQSFLGDLE RLRQLYPRIS VLPLGSAALA GNPYSLDREL LRQELDFESI GENSMHAVAD
RDFIVEWLQW ASLTQVHMSR MAEDLIIYSS AEFGFVQLSD AYSTGSSIMP QKKNPDSLEL
LRGKAGRTFG QMAGFMMSLK GVPSTYNKDL QEDKEPLFDA VDTVSAALRI AEGVLATMSI
NPEKMAAALT MDMLATDIAD YLVRKGVPFR ETHHISGRSV ALAEKTNCQI SDLTMEQWKE
LDERFDETVM EVFDFETSVE KRNAIGGPAR SMIARQVEVA RQRIGK