Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNC04420 |
Symbol | |
ID | 3256327 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006685 |
Strand | + |
Start bp | 1340038 |
End bp | 1341850 |
Gene Length | 1813 bp |
Protein Length | 466 aa |
Translation table | |
GC content | 50% |
IMG OID | 638255663 |
Product | argininosuccinate lyase, putative |
Protein accession | XP_569694 |
Protein GI | 58265076 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0165] Argininosuccinate lyase |
TIGRFAM ID | [TIGR00838] argininosuccinate lyase |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.000251148 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CTCTACCAAT CCCTTCCCAT CTCTAGCGAC TAACAATGGC CAGCGAACAG GATTTCACAA AGCGAAAGCT CTGGGGGTAG GTCATCCTCT TCGTTCATAG GCATGCCTGA CACAAGGCAC AGTGGCCGAT TCACCGGCTC TACCGACCCT TTGTGAGTTC TCTTTACTGC TTCTTATCTC GGCTCTGATT CTGGACAGGA TGCATGAGTT CAATCAGTCA TTGAAGTACG ACAAGCGCAT GTACGCTGCG GATGTCAAGG GCTCTATTGC CTTCTCCAAA GCTTTGCTCA AAGCTGGCAT CCTCAATGAG CACGAGCAGC AAGAGATTGC TAGGGGTTTA ATGATCGTCG AATCCGAATG GGCCGAGAAC AAGGTGAGAG TCCACGGATT GGACATAGTG GATGTCTCTT GCTTATCCTC GTATCATAGT TTGTCATCCA ATCCGACGAT GAGGACATCC ACACTGCCAA CGAGCGGAGG CTCAGCGAAA TTATTGGCAA GGACATTGGT GGTAAGCTGC ACACTGGCCG AAGCAGGAAC GACCAAGTCG CTACCGACAT GCGAATCTGG CTTGTAAGTA ATTCTTTGAA TTCCACAGGT CCATGCTCAC TGAAGGGCGC TACAGATGGA GGAGACCACC AGGGTCGAGG GTTACCTCAA GGACCTCCTA AACGTCATGG TCTCTCGAGC TGAGAAGGAA GTTGACGCTA TCCTCCCTGG TTACACTCAT CTTCAGCGCG CCCAGCCTGT CAGGTGGTCC CACTTCCTCC TTTCCCATGC TCAGTCCTTC CTTGGTGATC TTGAGCGTCT CAGACAGCTG TACCCCCGTA TTTCCGTTCT TCCCCTCGGC TCTGCTGCTT TGGCTGGAAA TCCTTATTCC CTTGACAGGG AGCTGTTAAG GCAAGAGCTC GATTTTGAGA GCATTGGAGA GAACTCTATG CACGCAGTTG CCGATAGGGA CTTTATCGTG GAGTGGTTGC AGTGGGCCAG TTTGACTCAG GTGCACATGA GTAGGATGGC CGAGGACTTA ATCATTTACT CTAGTGCCGA ATTTGGGTTT GTCCAGCTCA GTGATGCGTA CAGGTAGGTT GGTCCTTATA CCTTTATGGA CATTAGCTGA TATCACACCA CATTAGCACT GGCTCTTCTA TCATGCCTCA GAAAAAGAAC CCTGACTCCC TTGAACTTCT CCGAGGCAAG GCCGGTCGAA CATTCGGTCA AATGGCCGGT TTCATGATGT CCCTCAAGGG TGTCCCCTCA ACCTACAACA AGGATTTGCA AGAAGACAAG GAGCCCTTGT TTGATGCAGT TGACACCGTC TCCGCCGCAT TGAGGATTGC CGAAGGTGTG CTTGCTACCA TGTCTGTAAG TATATCTATT ACAAGGATTT AGATTGTTGG GAATGCTCAT GTGACCATGA AACAGATTAA TCCTGAGAAG ATGGCTGCTG CCCTTACTAT GGACATGCTT GCCACTGATA TTGCCGACTA CCTCGTCCGC AAGGGTGTCC CCTTCCGTGA GACTCACCAC ATCTCTGGCC GTTCGGTCGC CCTCGCCGAG AAGACCAACT GCCAGATTTC CGACTTGACC ATGGAACAAT GGAAGGAGTT GGACGAGAGG TTTGACGAGA CTGTCATGGA GGTCTTTGAC TTTGAGACAA GTGTGGAGAA GAGGAACGCC ATTGGTGGTC CCGCGAGAAG CATGATTGCT AGACAGGTCG AGGTGGCCAG GCAGAGGATT GGCAAATAGA ACCAAAACAT TTGGAAGTTT AAAAGGTCGG CTTCACCTAT AGTTTATGCA TCTGTATACA ACA
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Protein sequence | MASEQDFTKR KLWGGRFTGS TDPLMHEFNQ SLKYDKRMYA ADVKGSIAFS KALLKAGILN EHEQQEIARG LMIVESEWAE NKFVIQSDDE DIHTANERRL SEIIGKDIGG KLHTGRSRND QVATDMRIWL MEETTRVEGY LKDLLNVMVS RAEKEVDAIL PGYTHLQRAQ PVRWSHFLLS HAQSFLGDLE RLRQLYPRIS VLPLGSAALA GNPYSLDREL LRQELDFESI GENSMHAVAD RDFIVEWLQW ASLTQVHMSR MAEDLIIYSS AEFGFVQLSD AYSTGSSIMP QKKNPDSLEL LRGKAGRTFG QMAGFMMSLK GVPSTYNKDL QEDKEPLFDA VDTVSAALRI AEGVLATMSI NPEKMAAALT MDMLATDIAD YLVRKGVPFR ETHHISGRSV ALAEKTNCQI SDLTMEQWKE LDERFDETVM EVFDFETSVE KRNAIGGPAR SMIARQVEVA RQRIGK
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