Gene CNC04300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNC04300 
Symbol 
ID3256472 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006685 
Strand- 
Start bp1304383 
End bp1305549 
Gene Length1167 bp 
Protein Length370 aa 
Translation table 
GC content52% 
IMG OID638255651 
Productornithine carbamoyltransferase, putative 
Protein accessionXP_569681 
Protein GI58265050 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0078] Ornithine carbamoyltransferase 
TIGRFAM ID[TIGR00658] ornithine carbamoyltransferase 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GATGCCTTCT GCCACCGTCA TCCGATACGC CATTCAAGGG GCTCGCAAGC CGACTCCCAA 
CGTTATCATC CCTTTCAAAC CCACCAATAT CGCCAAGTCG CGACAGCTTC CTCCTCCTCA 
CCTCCTTACC CTTGCCGACC TCTCTCCTGA ACAGATTTCC AGTCTCATTG CTAATGCCGC 
GGCTCTCAAG TTCGTCTCAA AAAATGTGCA TACGACAGCG ATTCCCAAAC GCCTTGACCG 
ACGAACTGTC GCTCTGATCT TTAACAAGCG ATCGACGAGG ACCAGGGTTG CGAGTGAAAC 
TTCTGTTGAG GCCCTTGGTG GCCATCCTAT GTTTTTGGGC AAAGACGATA TTCAGCTCGG 
AGTGAATGAG ACTCTTGAGG ATACTGCCAA AGTTGTAGGT AGTATGACTG ATGGTATCAT 
GGCGCGTGTA GCTGGTCACG AGGAGATCGA AACACTGGCC CAATACTCGC CTGTGCCCGT 
TATCAATGCT CTCTCCGATT TGTACCACCC CACCCAAATC CTTGCCGACC TTCTGACGCT 
GTGCGAAATC TATGCCCCTG TACCTCCCCC CACTGAGATC GTTTCTGGGC AGGCATATTC 
TTCTATCCTA AGTTACTATC AGTCTGCCTT GAATCCAACC AAGATTCTGC AAGGCAAAAA 
GGTGGCATGG GTTGGAGACA CCAACAATAT CACGAACGAG CTCTTGGTGA CTCTTCCCAG 
GTTTGGGATG CACTTCAGCG TGGCCGCGCC CAAGGGGTAC GATAAGTTTG ACGAGCGTGT 
CTGGTCCAGG CTGTAAGTAC CGTGGCGAGT TCACCGTCTC CGACTAAACT AACGCGTATG 
TGCAGCGCCG AATCTAAGAC TGAATCTCTT GTCACGCTTA CCAACTCCCC AGCCGAGGCT 
CTTCGTGATG CCGACGTCGT CGTTACCGAT ACTTGGATTT CTATGGGTCA AGAAACCGAA 
AAAGCTGCTC GTCTTGAAGC CTTCAAGGGT TACCAGATCA CGAACAAGAT GGTCTCCGAA 
GCTGGTGCCA AGGAAGACTG GAAATTCATG CACTGCCTGC CAAGGAAGAA GGAAGAGGTT 
GACGACGAGG TGTTTTACGG ACCGAGGAGT GTTGTGTTCC CTGAGGCGGA GAACAGGAAA 
TGGACTATCA TGGCTGTTTT CGAGTAG
 
Protein sequence
MPSATVIRYA IQGARKPTPN VIIPFKPTNI AKSRQLPPPH LLTLADLSPE QISSLIANAA 
ALKFVSKNVH TTAIPKRLDR RTVALIFNKR STRTRVASET SVEALGGHPM FLGKDDIQLG 
VNETLEDTAK VVGSMTDGIM ARVAGHEEIE TLAQYSPVPV INALSDLYHP TQILADLLTL 
CEIYAPVPPP TEIVSGQAYS SILSYYQSAL NPTKILQGKK VAWVGDTNNI TNELLVTLPR 
FGMHFSVAAP KGYDKFDERV WSRLAESKTE SLVTLTNSPA EALRDADVVV TDTWISMGQE 
TEKAARLEAF KGYQITNKMV SEAGAKEDWK FMHCLPRKKE EVDDEVFYGP RSVVFPEAEN 
RKWTIMAVFE