Gene CNC04240 details

Gene Information

• Locus tag: CNC04240
• ID: 3256267
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006685
• Strand: -
• Start bp: 1290355
• End bp: 1292455
• Gene Length: 2101 bp
• Protein Length: 523 aa
• GC content: 51%
• IMG OID: 638255645
• Product: di-, tri-valent inorganic cation transporter, putative
• Protein accession: XP_569673
• Protein GI: 58265034
• COG category: [P] Inorganic ion transport and metabolism
• COG ID: [COG1230] Co/Zn/Cd efflux system component
• TIGRFAM ID: [TIGR01297] cation diffusion facilitator family transporter

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.0193268
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

AGTTATCGTT CTATCAGTTC AGGTGACACC TTCAACCACC CAGCTCCGCT CTTTAGAACA 
CCGTCCCCCA ACCCCCTCCC AACACCCGCC GCCCATTCGC CATCTTTGAT AAAGTTAGCA 
CAACATGGGG CTCTCAAGAC AGGCGCGCAT CATCACCCTT CTGGTGATCG ATTCCGTCTT 
TTTCTTGATC GTATGTACTT TTAGCCCACT CTTTTCATGC CTCGGCCAGA CTGACCATAG 
TAGGAACTGA TTACCGGATA CGCTGTCGGC TCTCTGGCAC TTGTTGCCGA CTCGTTCCAT 
ATGCTCAAGT AAGCTCTCAC CATCCCTCTT GTCATCACAA AGGACCCACT AACCCGATCA 
TTTTAAAACA ATAGCGATGT CCTCTCTCTC ATCGTAGCTC TCTACACAAT TAGGCTTGCT 
ACTTCCCCGT CCTCGTCTGC CAACTCTTAT GGCTGGCAGC GTGCTGAAAT TCTTGGTGCT 
CTCATTAACG GTGTCTTCCT TGTTGCCCTC TGTGTTTCCA TCGGTTTGGA AGCTGTTGGC 
AGGATCTTCT CTCCCCCGGA AATTTCCAAC GCCCAGTTGA TCGTTGTCGT GGGCAGCTTG 
GGTCTCTTGA GTAACATTGT CGGCCTTTTC CTTTTTCATG GTAAGTTTCC GCCCGCCGTC 
CATTGCCGCT GGATAGCCGC TGATAGGATA AATTTCTTTT TTTTTACTTC TTTAGACCAT 
GGTCATTCTC ATGGCGGACA CACTCACGGT GCTGTCGCAC TTCCCAACGA TGAGGACGAG 
ACGTCGTCCC TCATCTCTCG TGACGATTCC GTATCTGAGC TTTATCAGCA CCCTGCTCAA 
ACCCGCGCAC AGGTCATTGA AACTGCCCAA GAATTCGGGT ACGGCGGTAC TCAGCTTTCA 
TCGTCTCTTG ACTCCCGCGC AGGTCATTTG GCCAAATCGC CCAATGCAGG CGGCCATGGT 
AGAACTGGTA GCGCCAGTAG ACGAACAAAG AGAGGAAGTT TCTCCCGCGC TGGAGGCCAC 
AGCAGACTGG GCAGTGCCAA CATTGTACCT CCTGTTCCCG GACAGAACGA CGTGCTTCCT 
CCCGTAGGTG GCGATGGTAA CTCTACTTCA AGTTCTACAG TTATTGATAA TGGCAAGAAG 
AAAGCGTCTA AGAAGGATGA CCATGATCAA GACCACGGCC GTGAGCGCGA GCAGGGAAGC 
GACAGCGGCA AGAAGCTCGC CGGGAATGCC AGCGACGCTG AATCAGGTCA TACCCATGGC 
TCACCTGCTG AACACGGTAG GCATGGCGGC CATGGCCACT CCCACGGTGC TATGAACATG 
CGTGGCGTCT TTCTGCATGT TGTGGGTGAC GCTCTTGGTA ATGTCGGTGT TATCTCTGCT 
GGTCTGGTTA TCTGGTTGTA AGTGCACTAC CGTTTACTAT ACACGACTCT GGTTTTAACG 
TGCAACTAGC TGCCAAGGCC GATGGACTCT CTACTTTGAC CCAGGTGTCT CTCTTGTCAT 
CACCTGCATC ATCTTCTCCT CCGCTCTTCC TCTCGTCAAG TCCGCGTCTT ACATCCTCAT 
GCAGGGGGTG CCCTCCCACG TCTCTCTAGA CGCTGTGCGT CAATGTATTT ATGAAGTCCC 
TGGTGTTGAC TCTGTGCACG AATTACATAT CTGGCAATTG TCAGAATCAA CAGTCGTTGC 
CAGTGTTCAT GTTATGATCG AGGCCGGCAG AGACTACATG GTGGTAGCTA GCGGCATTAG 
GGAAAGGATG CATAGCCACG GAATCCACAG CGTCACCATC CAACCAGAGT AAGTACTCAA 
AAGGGATATT TATATTATGG ATTTGTTCTA ACATGCTGGT CAGGTTTTAC TGCGAGGAGA 
CTGATCCCCA GGATACCGAG GCCTGTCTCA TCCGTTGCCC GCCAGGACAA TGTAGCGGTG 
ACACTTGCTG CCCTCCAGGC GTCAAGATCA CCGGCCCAGA AGGTGATGAA GGGAACGGAC 
ATGATCACGA GCATTAAGGC CTTTTAAAAA GCAAAATCAT ATGAGAGCAG AACCTACATA 
ATAATAAGAT ACGGAACGAT ACTACACTAG ACCTCTATGT ATGTACATGA ACTGGTGGAA 
C 

 

Protein sequence

MGLSRQARII TLLVIDSVFF LIELITGYAV GSLALVADSF HMLNDVLSLI VALYTIRLAT 
SPSSSANSYG WQRAEILGAL INGVFLVALC VSIGLEAVGR IFSPPEISNA QLIVVVGSLG 
LLSNIVGLFL FHDHGHSHGG HTHGAVALPN DEDETSSLIS RDDSVSELYQ HPAQTRAQVI 
ETAQEFGYGG TQLSSSLDSR AGHLAKSPNA GGHGRTGSAS RRTKRGSFSR AGGHSRLGSA 
NIVPPVPGQN DVLPPVGGDG NSTSSSTVID NGKKKASKKD DHDQDHGRER EQGSDSGKKL 
AGNASDAESG HTHGSPAEHG RHGGHGHSHG AMNMRGVFLH VVGDALGNVG VISAGLVIWF 
CQGRWTLYFD PGVSLVITCI IFSSALPLVK SASYILMQGV PSHVSLDAVR QCIYEVPGVD 
SVHELHIWQL SESTVVASVH VMIEAGRDYM VVASGIRERM HSHGIHSVTI QPEFYCEETD 
PQDTEACLIR CPPGQCSGDT CCPPGVKITG PEGDEGNGHD HEH