Gene CNC04110 details

Gene Information

• Locus tag: CNC04110
• ID: 3256614
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006685
• Strand: +
• Start bp: 1261907
• End bp: 1263887
• Gene Length: 1981 bp
• Protein Length: 516 aa
• GC content: 48%
• IMG OID: 638255632
• Product: AAA family ATPase, putative
• Protein accession: XP_569653
• Protein GI: 58264994
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0465] ATP-dependent Zn proteases

Plasmid Coverage information

• Num covering plasmid clones: 31
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CCGCTACATA ATAATAATAC CTCTGCCACT GCGGTAGGGT CACCAACATA ATTACCGATA 
CTGCATACTC CAAATAACAC GACATTTCAC GATGTTTAGA TCATCCTTAC CTCAGCGGAC 
CAGTCATAAT TCTGCCTCAG AAGCTGGGCC CTCGATCCCT ACACCGATAC CGACAGATGG 
AGATGCTGTC ACACTTGAAA ATGCCAGTAA CACAACTGGG GAAGCTACTT TATCCTCAAG 
TGGCTCATCC GAAGGAGAGT CATTAATATC CAAGATGATG GCGGATAAGT GAGTGTCAGT 
GAGCTAAAGT CGGCCTCCAC TCTAACGCCC AATAACAGTC CTTACTTCTC AGCAGGTGCT 
GGACTTATGG TAGGCTCGGA ATTAGATGTA GTACCAATTT CCACTGATTT TATTCGGACA 
CAAAGGGGAT TGGTGTGGCC CTGACAGCAT TGCGTCGCTC TATAACACTA GGAGCTACCA 
TGGCTCAACG AAGAATGTTG GTGACTCTTG AAATCCCTTC CAAAGATCGG TCATACCCAT 
GGTTCCTCGA GTGGATGGCC CATCAGTCAG CGGCCCAGAC CAGAGGAAAT GTTAAACCAC 
CCGGTCTGTT TGGTTGGGGT CAAGGCATGA GAAGTCACGA GCTAGCTGTG GAAACAAGTT 
ACAAGCAGCA CGAAAATGGG GCCAGCGAAG CCATTTTCAA TTTAGTGCCA GGGCCGGGTA 
CACATTACTT CAAATATGGA GGGGCCTGGT TTCAAGTATG TGATATCCAA TGATGGGCAT 
AAATATGTCA GATTATTGAC GTATAAATAC ATCAGGTAAA ACGCGAGCGG GATTCTAAAC 
TCATGGACCT GCACTCCGGA ACGCCTTGGG AGACACTGAC TCTGACAACA CTCTCAACTT 
CGCGAGACCT CTTTTCATCT CTCCTTGAGG AGGCACGAAC GCTTGCTGAA GCCTCGACTG 
AGGGTAAGAC TGTTGTTTAT ACTGCGTGGG GTGTCGAGTG GCGTCCATTC GGCAAACCAA 
GGAGAAGAAG GGAAATGGGC AGTGTAGTCC TGGGTAAAGG AATTGCCGAA GAAATCGAAT 
CCGATCTGAA GGGCTTTTTG GGTCGAGGGA AATGGTACGC GGAAAGAGGT GGGTTGTATA 
TGACTCCTGA TAATTCTCTT CCTAAACGCT TGTCTAGGTA TTCCCTATCG AAGAGGATAC 
CTCCTGCATG GACCTCCGGG ATCTGGTAAA ACGTCGTTCA TCCAAGCTCT CGCAGGGTCC 
TTGAACTACA ATATCTGTCT CATGAATCTT AGCGAGAGAG GTCTTACAGA TGATAAACTT 
AATCATTTGC TGGGCCTTGT ACCTGAGCGG AGTTTTGTGC TGCTAGAGGA TATTGATTCG 
GCGTTTAACA GACGTGTACA AACGAGTGAG GACGGGTGAG TGGGTTATGA GTCATGCGTT 
GCGATGGTAT CTTACGACTC TCTAGCTATA AATCTTCTGT CACCTTCTCC GGTCTCTTAA 
ATGCTCTTGA CGGTGTCGCA TCATCGGAAG AACGAATCAT CTTTATGACC ACCAATCATT 
ACGATCGCCT TGACCCGGCA CTTATTCGAC CAGGTCGAGT TGATATTCAA CAACTTCTGG 
ATGATGCTGC TGGTGAACAA GCCAAACGAC TGTTTGTCAA GTTCTATGGC AATTCAGTCA 
ATGAGGATGG CACAAAGGGT AGAGTGTTGA GGGAAGGAGA GCTTCCGCTA AATGACGAGG 
AAGTAGAATC TTTAGGCAAC TCGGTGCAAC GTATCGTGGA CGATGAGCGG GCTCATGGAA 
AGGTCGTTAG CATGGCTAGT CTGCAAGGGC ATTTTATCCG TACCGGAGCG AAAGAGAGCC 
TAGATGGGAT CCGTGAGCTG TGTAGGCCAA GGGAAGGGCA AGCATAGGGA CATTTCTATT 
GATGCATCAA CACTACTGCA TGATAGACAA TATTACTCGG TTGATTAAGT TACACAATTC 
A 

 

Protein sequence

MFRSSLPQRT SHNSASEAGP SIPTPIPTDG DAVTLENASN TTGEATLSSS GSSEGESLIS 
KMMADNPYFS AGAGLMGIGV ALTALRRSIT LGATMAQRRM LVTLEIPSKD RSYPWFLEWM 
AHQSAAQTRG NVKPPGLFGW GQGMRSHELA VETSYKQHEN GASEAIFNLV PGPGTHYFKY 
GGAWFQVKRE RDSKLMDLHS GTPWETLTLT TLSTSRDLFS SLLEEARTLA EASTEGKTVV 
YTAWGVEWRP FGKPRRRREM GSVVLGKGIA EEIESDLKGF LGRGKWYAER GIPYRRGYLL 
HGPPGSGKTS FIQALAGSLN YNICLMNLSE RGLTDDKLNH LLGLVPERSF VLLEDIDSAF 
NRRVQTSEDG YKSSVTFSGL LNALDGVASS EERIIFMTTN HYDRLDPALI RPGRVDIQQL 
LDDAAGEQAK RLFVKFYGNS VNEDGTKGRV LREGELPLND EEVESLGNSV QRIVDDERAH 
GKVVSMASLQ GHFIRTGAKE SLDGIRELCR PREGQA