Gene CNC04030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNC04030 
Symbol 
ID3256496 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006685 
Strand
Start bp1247147 
End bp1249758 
Gene Length2612 bp 
Protein Length579 aa 
Translation table 
GC content49% 
IMG OID638255624 
Producthypothetical protein 
Protein accessionXP_570006 
Protein GI58265700 
COG category[I] Lipid transport and metabolism 
COG ID[COG0657] Esterase/lipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATCAAATATC ACTTTCTCGT TTTCTGTTTG CATATTCCCA TCGGCATCAG ATTGACCAAG 
ATGCCTGTCT CAGCACAAAA CTCCCCAGCT CGGCCTTCTA TTCGCGAAAC CATAGCGGCC
CGTCGTGCAG AACTCCGCAA CACTCCCAAA TCTCAGAGAA CCGGCGACCT CCAAACTTAC
GGTAGCCCGG CTGGCAAAAG AGCGGGTACT CCCAGAGGAT TTGTTCACTT AGACGGGAGT
GGGGCAGATC TGCTAGAGGA CAAGACTGTG GAAGGGCAGT TGAAGAAGGC CGCTAAATCA
GGTAAGCTCA GGTGAAAACT ATGCACGGGA AAGTAAAGAA GCTGATGTTC GGCTAACGTT
GGGTGTTCAG GTAAATTAGA TATTGCTTCC CTTGAGCTTG AGCGCATCCC CCCAAAAGTG
TACATATCCC TTCTGGGGCT TTCGACTACC GACCTTTCCA ATCCTCCCCC TCCTCCTTCC
CCGCCGAGGG AATCATTAGC TGCCTCACGC TCACGCACTG CAATCGGTAC TAGCCCTTTT
GCTGTAGATG ATGAAATAGA CGTAGACAAT AGTCAGCAGG GCTTGGCGTT TCGCACTTGG
AGGAAAGAAG AAGATATCTG GTCAGAACCA GAGGAACTTA CCACCCTGAG AATTGGGAAT
AACAAGCTCG TGGAGATTGA CAGGGAAATT GGAATGTTTG GAGGATTGAA AATCCTGGAT
GTGTGCAACT CTCAATATTC CTCACCTGTT CGCGTGCTCA TATGTACTTT AGTTAAGCAA
AAACCTTCTC AAAGGGGTTC CCGATGCCCT CTCTGACCTC CTTCGTTTGA GCTCTCTGGA
TCTTTCGTGG GTCTTCTCGC TTTGTTTTGG ACAAGCATTA ACTGGTTTCA AGCCACAATT
CGCTACCATC CATTCCTCGT TCTGTCCTTT TGCTTCCCCA ACTTCAGGTT CTGGATATCT
CGCACAATTC AATTACTACC CTATCTTTTG ATTCACCCAT AGGGCCTTCT GAAGAAGGCC
TCCGCTATGG CTCTGGATTT TTCACTACCG CCATCCAACG TCAAACCGCT CTCAAGTCAG
AAAGACCTAT ACTTCCAGTG CTTCGTCATT TGAGTCTTGG GAGCAATACC ATCACTCAGG
AGGGTCTGAA GGCACTGGCC AGTGTCAATC TTAAGCATAT GAGGGTCCTC AACATAGAAA
ATAACAACGT TTCGGGTGTT CTTGATGTTC AAAGTCTTGG GATCAGTGAG AAGGCCATGC
CGGAGCTCTC TCACCTTGTT CTCTCCGGAA ATATCAATAT CCGCGGCCTC ATTGGTACCA
TTGCATCGGC TGCTAAGGTT GATACCATAG GATGCAACTT ACGCCAAGCC ACTCCTTCAT
TCAACCATGA AGATACATCC ACTGTCGAAG ATAATCAAGA CAAGGCTAGC TCGGCTGTCG
AAACAGGACC TGCGGCGAAT GATGAACATA CTTTACCTAT TCCGGAGCCT GACCTTACTA
TTGTCTACCG CACTTTTCCA GCAGCCACGT TCGACTCGGA ACCTCTGGCT GTTGATTTCG
ATCTTTATCT TCCTTCTACC CCTGCCGGCC CTTCTGGCCA CCCCCTTGTC ATCTGGTTCC
ACGGCGGTGG TTTGCTACAG GGAAATAAAG AAAATCTTCC TCCTCATTTC AGGCGATTGC
CTTCACACGC TTACACCAGA GGCGATGGAC GCCCTGATGA AAGTGTAGCA ATCATTTCGC
CCAACTATCG CCTCGCTCCT CAGGTCTCTA TCCTTGATAT CCTCTCTGAG GTTACTGTTC
TCTTCGACTA CATTCAAACC AGGCTCAACG ACAGATTGGT CAAGGATGGA AAGGGTGATC
ATAAGATAGA TGTTTCTAGG ATCTGCCTTT CAGGGGGTTC CGCGGGGGGC TATCTGGCAT
TGATAGCAGG CTTGAGAGTA CCTGATGAAG TTGGCGACGA AGAGATTGGA GCTTATAGAG
GATTGAAGAA TGAGGCCATC AAATGCCTCG CACCTTTCTA TCCCATCACT GATCTCACGG
ACAAATTCTG GGCGACAGAG ACGAATCCAG TACCATGGAT GAATGGCAAC AGGTAAGTGA
GCCCATAGTG ACATATAATT TCTAAATCGA CAAATCATAG CATCTCGCAC GCTCAAGCGA
AGCCTCATAT CGACACCAAA GCAGCGCCTG TCTGCTCTGC TGTCTCCGGT GGACCTCGAT
CTATCCTATA TCCATATATG CTTCAACATT CTCTTTTCCC TTCCCTCCTG TTCCTTACTC
AGCGTTCAGT TGGACAAGGT CTCGATGCGT TCCGTCCCTC TCCTCTCTCT TTGTCCATCC
CTCATCGCCT GGAAATTGCT TCCAAGTCGA GCAAGGCAAA GTATCACGTT CCAATCTTCT
TTGTGTATGG CACCATTGAC GATAAAGTGC AACCCATGGA GAAGACGATT GAGGCACTGG
GTAGGGCCAG TGGAGATCTC GTAATCGAAA GGGTTGAAGG GGCAGATCAC GCATTCGATG
AGGATCCGAA GGTCGAATGT CAAGCATTCC AGGAGTGGTT GGGCAAGACA CTCCTTTAGT
GCTCACTAAC TAGTCATCAA ATGCATGCAG CG
 
Protein sequence
MFGGLKILDL SKNLLKGVPD ALSDLLRLSS LDLSHNSLPS IPRSVLLLPQ LQVLDISHNS 
ITTLSFDSPI GPSEEGLRYG SGFFTTAIQR QTALKSERPI LPVLRHLSLG SNTITQEGLK
ALASVNLKHM RVLNIENNNV SGVLDVQSLG ISEKAMPELS HLVLSGNINI RGLIGTIASA
AKVDTIGCNL RQATPSFNHE DTSTVEDNQD KASSAVETGP AANDEHTLPI PEPDLTIVYR
TFPAATFDSE PLAVDFDLYL PSTPAGPSGH PLVIWFHGGG LLQGNKENLP PHFRRLPSHA
YTRGDGRPDE SVAIISPNYR LAPQVSILDI LSEVTVLFDY IQTRLNDRLV KDGKGDHKID
VSRICLSGGS AGGYLALIAG LRVPDEVGDE EIGAYRGLKN EAIKCLAPFY PITDLTDKFW
ATETNPVPWM NGNSISHAQA KPHIDTKAAP VCSAVSGGPR SILYPYMLQH SLFPSLLFLT
QRSVGQGLDA FRPSPLSLSI PHRLEIASKS SKAKYHVPIF FVYGTIDDKV QPMEKTIEAL
GRASGDLVIE RVEGADHAFD EDPKVECQAF QEWLGKTLL