Gene CNC03960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNC03960 
Symbol 
ID3256556 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006685 
Strand
Start bp1232478 
End bp1234769 
Gene Length2292 bp 
Protein Length555 aa 
Translation table 
GC content46% 
IMG OID638255617 
Productphosphate transporter, putative 
Protein accessionXP_569629 
Protein GI58264946 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00887] phosphate:H+ symporter 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.362408 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CGTTAGACGA CTATGCTCAG CGAACATTCC GTGTTCCTAT GCTTGGAGCA CGAAAAGTAC 
TTAACCAGCT GTTAATATAA TGAAGAAAAA GAGTCCTCCA TATCCCTCTA ATCTCAAAAG
CTCTCTCCAC GAAGAACCAA CTGGTCCACA TAAACTATGT CGAGCCAGTT CGAGGTTGAA
AAAGCTCACG CCAACGTCCC AATGTCTGCC GGTGAAAGAC GACGTGCTGC TCTTGCGGAA
ATTGATGAAG CCAGTTTCTC CTGGTTTCAC GCTAAAGCCT GTATAGTTGC TGGTGAGTTT
TCTTGAACCC TCGCGCGGTC TTTCTTTGCT AATCTCTCAT TAGGCGTCGG ATTTTTCACA
GACGCTTATG ATATATTTTC CATTTCTATC GCCGCCACCA TGATTGGTTA CGTTTACCAT
AACGGTGGTT CCAACACCAG TAATCAGGAT TTGGGTATCA AAGTTGCCCA TTCTATTGGC
ACTTTCTTCG GTCAGCTCCT CTTTGGTTAT CTCGCCGATC ACATTGGTAG GAAAAGGATG
TACGGTGTTG AATTGGTAAG GTCGTGTGCG CCCATCTTGC AGCAGGAGAC TTACCTTCCA
ATTTTAGATC ATTATCATCA TTGGTACTCT CGGTCAGGCG GTCGCCGGCC ATGCTCCAGG
CGTTAATATT TATGGTGTTT TGATTATGTG GCGTTTTATC ATGGGTGAGT CCGGCCGCAA
TAGTCCTCAC CCAATCTTTG CTAATTTCTG CTCAGGTATT GGGATTGGAG GTGACTATCC
GGTTTCTTCT GTCATCACCT CCGAATTCGC AGCCCGTAAG ATTCGAGGAA GGATGATGGC
TGCTGTTTTC TCAGCTCAAG GTTGGGGAAA CTGTGAGCAC GATCGCTCTG TCCAGTCTTT
TTCATCGCTA ATAACTTTCC TAGTCACTTG CGCTATTGTC GCAGTGATTG TCGTCGCTGC
TTATAAGGAC TCTATCCATT CTCAGCCTCT TGATGACTTG AAATCCGTCG ACCAAGCGTG
GCGTCTCATC ATAGGTATCG GGTGTGTTCC CGCCGTTATA GCTCTCTACT TCCGATTGAC
TATTCCCGAA ACTCCTCGCT ACACAATGGA TGTTGAGCGA AACATCAAAC AGGCTTCTCA
AGACGTCGAT GCGTACATCA CTACCGGTCA ATACATTGCA GACCCAGTAC AAATCAATGA
TCGCGCCGAG GTCCCTAAGG CTTCATGGTC TGATTTCGCT CGTCATTTCG GGCAGTGGCA
GAACGGCAAA GTTTTACTTG GCACTTCTTG GTCATGGTTC GCCTTGGACA TAGCGTTTTA
TGGTCTAGGT AAGGTGGCAG CTTCCTGCAC TATGCTTTGC TAATGAAATT TATTCGACTA
GGACTAAACT CATCAACTAT TTTGTCAACC ATCGGCTTCG GTTCTTCTAC CGACCTTCCA
ACCAAACAAG AAAACATCTA TCAAACATTA TACAACGTTG CTGTCGGTAA TATTATTTTG
GCTGTTGGAG GACTAATTGT GAGTTCAACG CGTCTGGTGA GGTGCGTAGC TGACAGGACT
GAAGCCTGGA TACTATTTCT CCATGGCATT TATCGATTCA TGGGGTCGAA AACCTATCCA
ACTGATGGGG TTTGTACTCC TTACGATCAT TTTTGTCTGT ATGGGCTTCG GTTACGATAA
AATGCTTTCT ACCGACCCCG GCAAAAAGGC CTTTGTCTTC CTCTATTGCA TGGCAAACTT
TTTCCAAGTC AGTTTTTACC GTTGAAACTC CCTTCATTAC ACTGACATTG ATGCATCAGA
ATTTTGGGCC CAACACTACG ACCTTTATAG TCCCCGGAGA AGTCTTCCCT ACTCGTTACC
GATCAACTGC CCATGGTATC TCCGCCGCAT CAGGCAAGCT GGGCGCCATC GTTGCCCAGG
TCGGATTTTC CAGGCTTATC AATATTGGTG GCACAAACCA GTTCCTCAAG CACATCTTGG
AAATCTTCGC TTTCTTCATG CTTACCGGTG TTTTCAGCAC ATTACTTCTT CCCGAGACTA
AGGTAGGTAC AGGATTGCCA TGACACATCG CGTTACTAAC TTCTGGCGCC AGAACCGAAG
CCTAGAGGAC TTGTCACAGG AAGACCAAGA AAGTTTTGTT AGGAACTCTG GTACGGCCAC
TGCTGTCCCT ATGGTACAGA AGACTGGCAC TTCATCAGAC GATGAGAGGG TTCTTGCTGA
GGCTCTGTAG ATGCTAGAGA CAAGGTACAT CACAGTATAT TGGATGATCT TGATGATGTT
ATAATAACAT GT
 
Protein sequence
MSSQFEVEKA HANVPMSAGE RRRAALAEID EASFSWFHAK ACIVAGVGFF TDAYDIFSIS 
IAATMIGYVY HNGGSNTSNQ DLGIKVAHSI GTFFGQLLFG YLADHIGRKR MYGVELIIII
IGTLGQAVAG HAPGVNIYGV LIMWRFIMGI GIGGDYPVSS VITSEFAARK IRGRMMAAVF
SAQGWGNFTC AIVAVIVVAA YKDSIHSQPL DDLKSVDQAW RLIIGIGCVP AVIALYFRLT
IPETPRYTMD VERNIKQASQ DVDAYITTGQ YIADPVQIND RAEVPKASWS DFARHFGQWQ
NGKVLLGTSW SWFALDIAFY GLGLNSSTIL STIGFGSSTD LPTKQENIYQ TLYNVAVGNI
ILAVGGLIPG YYFSMAFIDS WGRKPIQLMG FVLLTIIFVC MGFGYDKMLS TDPGKKAFVF
LYCMANFFQN FGPNTTTFIV PGEVFPTRYR STAHGISAAS GKLGAIVAQV GFSRLINIGG
TNQFLKHILE IFAFFMLTGV FSTLLLPETK NRSLEDLSQE DQESFVRNSG TATAVPMVQK
TGTSSDDERV LAEAL