Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNC03860 |
Symbol | |
ID | 3256288 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006685 |
Strand | - |
Start bp | 1198826 |
End bp | 1201744 |
Gene Length | 2919 bp |
Protein Length | 725 aa |
Translation table | |
GC content | 46% |
IMG OID | 638255607 |
Product | adrenoleukodystrophy protein, putative |
Protein accession | XP_569624 |
Protein GI | 58264936 |
COG category | [R] General function prediction only |
COG ID | [COG4178] ABC-type uncharacterized transport system, permease and ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GCAGAACCAT AGACAAACTC ACCCATGCCA TCCTCCCACA TAGTTCCACT AACCAAAGAC ACCCTCCGCT CCCGTTTTAA ATTCATCCTC AATTCGTATC TCCAACATCG CCCGATATTC CAACGTGCAT TCACAGCTGC ATTTGTGATA TACTGTCTTA TCAGTACCTA CGGATCTCTC ACTGGTAGGG GTGCCAAAGG AGCTCCTGGA GGAAAAGGAA ATGGAAAAAG AGATAAAGGT TGGTCTATGC CGGTTGAGGG TGCCGTCCCC AATGCTTATA AGGAAAAACA GGTGCCAAGC ATGGTATTAC GGGGTCCATC AAAGATCCAC TATTCCATGT TCGTTTGAAG CGACTTATTA GGATTGTTAT ACCTAGTCTG AAAAGTAAAG AGGCCGCCAT GCTGGCGCTG CACTCGGCTT TTTTGGTCGG CAGGACGGGG TTGAGTCTAT ATGTGGCTGA CCTTGATGGA AGGTAAATGG ATCTATATTA ACTAATCCTA CCTGGACCAG GAAGCTAAAT CGTAGAGTTA CAGAATAGTT TCTTCTCTTG TCACTGCCAA CCCGCATGCG TTCCTTATGA ACATAGCAAG GTGGTTACTA GTCGCTATTC CGGCAACTTA CACCAATTCA ATGTTGGAAT ATCTTCAGTC CGAATTGGGC CTTGCTTATC GTACAAGGTG ATTCTTCTTC ACCTCTCCAA AGACCTCTCC TCTGATGGCA TTTCCAGGTT GACCAAGTAC GCTCTGACCA TGTACCTTGA CCCGCCCGGA GTCGAAAGTG GTGGCGACAA GGATGGCGAG CAATTATTCT ACAAACTTGC AAATCTTGAT GACAGGATAA AGAATGCAGA CCAATATTTG GCAGAAGATA TTCAGCAGCT TAGTAGCAAG CTGGCTGAGA TATACTCAAA CATTGCCAAG CCTGTGCTAG ATGTCATGTA AGTCTGCAGA TTTTGAGCAA GGCCGAGGAG GACTAATGGA GTATAGACTT TACAACTATC AACTATCCAG GAATGTTGGT GCAGAAAGCC TTGTACTCTT GACTATCCTT GTACAAACTA GTGCTACTCT CTGTGAGTCC GCTATCTGCT TTTCATCATC ATGCGTGCAC CGTCTGATTT TGTCTCCAGT GCGGGCCATT ACTCCACCGT TTGGCGCTTA TACAGCTCAT GAAGGTCGGT GACTTTTAAC ACAGTCTTTC ACATTGGCTA ATCTTGCACT ACATTTCCAG CCAAACTTGA GGGCGAACTC CGTTTTACCC ATTCCCGTTT GCTTGAATCA GCTGAGGAAG TAGCTTTGTA TCATGGTGAG GAGTTCGAAA AGAATGTTAT TGAAAGGGGC TATTTTGCGC TTGTCAAGCA CATCAATCGC ATTCTAAAGA TTCGCGTGGG TCACGGAATG GCGGAAGAAG GTGTCATCAA ATGGTTGTGG GGCAGTCTGG GACTGTGCAT TTGCGCGATA CCTGTATTTG GAGGAAGTGC TTTGGGTATG AAGGAAGGAG ATCTGGGAAG TAGAACTGAG GGTCAGTATC CCAATCTTGG TTACCTCTCA ATGTGCTGAT GAATGGCAGG CTTTGTAACG AACCGAAGAT TGCTATTATC CTCAAGTGAT GCCTTTGGAA GAGTTATGTA TAGCTACAAG GTGAGCAGGA CAAAACAGTT GAAGAATTGT CATACTCATT AATGATCAGG ACATGGCAGA GCTAGCTGGG TATACCTCTA GAGTGTCAGA GCTTTTCGAA ACAATGGAAC ACGCGAAAAA AGGGGAGTAC CAAAAGAAGC TTGTGAGCAG TGTTAGCACT GAGAATAATG CCAAAAGTAC GTGGGTGCTC CTAGAATCAG AGTCACTGAA AAGCGTCCTG ATTACTAACA TCTGTCAGTT CTGCAAGGTA GAGGCAAGAT TATAGAATCA GATGAGATCG AGTTTGATCA AGTCCCCCTT ATCAGTCCGA ATGGAGACGT CTTAGTCAAG TCTATGTCAT TCCACGTTAA GCCTGGTGTA AGCCGTTCTT ATAATCTAGT TCGTTAAGCA CTTGGAACTA ATGCGGTCAC TAGAAACACC TCCTAGTAAT CGGTCCAAAT GGTTGCGGGA AAAGCAGTTT ATTCAGGATC CTTGGTGGCC TTTGGCCTGT TTATGGTAAG GGTCGGTTGT AACCAGTGTG GCTGAATGCT AACATCATTC AGGGGGAACG GTCTACAAGC CCCCTTCGAA CCAGTTCACT TATATTCCGC AAAGGCCGTA CCTTTGCACC GGTACACTTC GTGACCAGAT AATCTACCCC CACAGTCACG CTGATATGCT GTCCCATGGA AAATCTGATG AGGATCTTTC AAAGATCCTT GAAGTAGTAG AGATGGCTGG AATTATTGAA AGAGAAGGAG GGTGGGACGC TGTGAGAGAA TGGAGGGACA CTCTGAGTGG TGGAGACAAA CAGAGGATCG CCATGGCCCG GTTGTTTTAT CATAAGCCAA AGGTGAAGTC TGTTCAGCAA AAGTTTCAAA GCATTCGCTG ATCTGAATCG TTCAGTACGC AATTCTGGAC GAATGCACCA GCGCGGTGAC ACTCGAGATT GAAAAGACCA TGTATGATCA TGCCACCTGT ACGTCTTTCC ATTTTCTGGT GACAACTGTC AATTGAACCC CTTGTAGCCC TGGGTATCAC TCTAATGACG GTATCCCATC GACCCTCCCT TTGGAAGTTC CACACCATGG TTCTTGAATA TGATGGACAA GGCGGGTACA CGTTTACTCA TCTTGATGCC GAAAAACGAC TGGCATTGCA AGAAGAAAAG CAAGAGCTGG AACACAAACT CCTGAGCGTC CCCAAATTGA AAGATAGGTT GGAAGAATTG AAGATGATCA AAGAGCAAAG AGAATTCACG AGTGGTATTT AAGAGCGAAT CCGTTATGTA CTGCTGTAT
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Protein sequence | MPSSHIVPLT KDTLRSRFKF ILNSYLQHRP IFQRAFTAAF VIYCLISTYG SLTGRGAKGA PGGKGNGKRD KGAKHGITGS IKDPLFHVRL KRLIRIVIPS LKSKEAAMLA LHSAFLVGRT GLSLYVADLD GRIVSSLVTA NPHAFLMNIA RWLLVAIPAT YTNSMLEYLQ SELGLAYRTR LTKYALTMYL DPPGVESGGD KDGEQLFYKL ANLDDRIKNA DQYLAEDIQQ LSSKLAEIYS NIAKPVLDVI LYNYQLSRNV GAESLVLLTI LVQTSATLLR AITPPFGAYT AHEAKLEGEL RFTHSRLLES AEEVALYHGE EFEKNVIERG YFALVKHINR ILKIRVGHGM AEEGVIKWLW GSLGLCICAI PVFGGSALGM KEGDLGSRTE GFVTNRRLLL SSSDAFGRVM YSYKDMAELA GYTSRVSELF ETMEHAKKGE YQKKLVSSVS TENNAKILQG RGKIIESDEI EFDQVPLISP NGDVLVKSMS FHVKPGKHLL VIGPNGCGKS SLFRILGGLW PVYGGTVYKP PSNQFTYIPQ RPYLCTGTLR DQIIYPHSHA DMLSHGKSDE DLSKILEVVE MAGIIEREGG WDAVREWRDT LSGGDKQRIA MARLFYHKPK YAILDECTSA VTLEIEKTMY DHATSLGITL MTVSHRPSLW KFHTMVLEYD GQGGYTFTHL DAEKRLALQE EKQELEHKLL SVPKLKDRLE ELKMIKEQRE FTSGI
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