| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNC03660 |
|---|
| Symbol | |
|---|
| ID | 3256482 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006685 |
|---|
| Strand | - |
|---|
| Start bp | 1156192 |
|---|
| End bp | 1158598 |
|---|
| Gene Length | 2407 bp |
|---|
| Protein Length | 761 aa |
|---|
| Translation table | |
|---|
| GC content | 60% |
|---|
| IMG OID | 638255587 |
|---|
| Product | mitochondrial intermediate peptidase, mitochondrial precursor, putative |
|---|
| Protein accession | XP_569591 |
|---|
| Protein GI | 58264870 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0339] Zn-dependent oligopeptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTCCGTC TCCCCCGCAT CACACGCCGC GCCCTCTCCT CTGGCGCCCT TGCGCCCCAC
TTTGACCGCC CGCTCCCGCC CCCGCCGCCC GCGCCCCCTG CGCCCCTCTG CGCCCTCCCG
CCGCTCACCG CGCCCGACGC CCTCGCGCCC CTCACCCGCC GCACCGTCCG CCACGCCGAC
GCCCTCGTCG CCCGCATCGC CGCAGCGCCC GCACACCCAG ACCCCGCAGA GCTCCGCCGC
GTCGTCAAGA ACCTCGACCG CCTCAGCGAT GTCCTCTGCG GCGTCATCGA CATGTGCGAG
CTCGTGCGCA ACGTCCATCC GGACCCCCGC TGGGTCGCGG CCGCCGAGAA GACGTACGAG
ACGCTGTGCA GCTTCATGAA CCAGCTCAAT ACCAGCACGG GCCTCTATGA CGTGAGTCCC
AGCGTGGCGC CCCGTGCATC CGTGCTGCCG CTCATCCGCG CCCCAGGCAC TCGTCGCAAC
CGTCTCCCAC ACGTTCCCCG GCAACCCCCT CTCGCCGGCC GAGCTCAGAG TCGCCCAGAC
CTTTCTCTCA GACTTTGAGC GCTCGGGCAT ACAGCTGCCC CCCGGCGTCC GTGCCAAATT
CGTCCGCCAC TCGGACAACA TCCTCTCCCT CGGCCGTACC TTTCTGTCCT TTGCCGCCGC
TGGGCCCTCG GCGGACACGC CCATCGAAAT ACCAGAGCCA GAAGTGCTGC TCGCCGGGCT
CAGCTCGAAA TTCGTGGCGT CCTTGCCGCG GAAAAAGCGC AAGGGTCCCG CACTCCTTGC
GCCTGGCTCC TGGGAAGCGC AGATGATCGG GAGATATGCA GACAATGAGG AGGCTCGGCG
CCTGGTGTAT ATCGGCTCCA TGCGAGAAGA CAAGGACAGG GTCTACGTGC TCGAGACAAT
GCTGAAAGAA CGGGCAGAGC TCGCTCACGT GCTTGGAAAG GAAACATGGG CCGATGTCGC
CCTGTCCGAC AAGATGGCCA AGACACCCCA AAACGTTTTA CAGTTCCTCA CGTCGCTGGC
GACACACCAC CGTCCATCGG CAGCCGCAGA CGTTGCCGCC CTCCAACGCC TCAAGGCCCT
TTCCACAGTC TCCCGCACCT CCTCTCAATT GCCCACCGTG CACGCTTGGG ATAGAGATCA
TTATGCAGAG CAATATGCTG CATCGTTATT ACCCAACGGA TCCCTACCGT CCATCACACC
CTACTTCTCC GTGGGCACAG CCATGTCTGG CCTTTCACAC ATGCTCTCCC GCCTCTATGG
TATCTCCTTC AAGCCCGTGT CTGTCGCACA TGGCGAAGTC TGGCACCCCT CGGTCAGGCG
GTTGGACGTG ATGGACGAAC ACGGCAAAAG AATAGGAGTG ATCTACTGCG ATTTGTTTTC
ACGACCCGGT AAGCCATCAG CCGGCGCAGC ACACTATACC GTCCGCTGCT CGAGAAGGGT
GGACGATGAT CCTTCCGAAG GCGATGGCCT GCCTCCCGGA TGGGATCAAC ATCTCGGTAA
AGGAATGGAA GTGCAAGGTG AAGCGTTGCA TGGAAAAGAG GGCAAATACC AACTTCCCAT
CGTTGTGCTG ACTACAGACT TTGGAACGGT TGAAGAAAGC GGCCCGGCAT TGCTTGGGTG
GAATGATCTC GAGACTCTGT TCCACGAGAT GGGGCATGCT ATCCACTGTA AGATATTCCA
ACACAATGAT TCAAAAAGAG GCACGATAAA CTAACACACT ACCATTTTTA TAGCAATGAT
TGGCCAAACA GAGTTTCACA ACGTGTCCGG TACTCGGTGC GCCACCGACT TTGTCGAGCT
CCCTTCCATC CTCATGGAGC ACTTTATCTC TTCCCCAGCT GTCCTCAGCA CATTCGCCAC
CCACTATACC ACCAACGAAC CTTTACCGAT CCCCCTCATC CAAGCGCATC TGCAACTCGA
CCAGTCCCTC AAAGCCCTCG AAACACATTC CCAAATCCTG ATGGCACTGC TTGACCAAAA
GTACCACTCG ATCAAGCATG GCGAACAACT CGACTCTACC CGAGTCTGGA ACGAGCTGCA
AAGCCAAGTG GGGGTGATCC CACCCGTGCG AGGGACGGCG TGGCAAACGC AGTTCGGACA
CTTGTACGGC TACGGCGCGA CGTATTATTC CTATCTGTTT GATCGCGCAA TCGCGGGCAA
GATCTGGTCA TCACTGTTTG CGCGGGGGCG TACCGGGCCC GCCGCCGCTA ATCATGATCC
GGCGGCGGCG GAAGACATAC TCTCCAGGGA AGGAGGTGAA GCGTTCAAAG AAAAAGTCTT
GAAATGGGGC GGTGGGAGAG ATCCTTGGGA GATGGTCGGA GACGTGATTG GAGGTGCAGA
GGGCGAGCAA GTAGCCAAGG GAGATGAAAA GGCCATGGAA CTGGTCGGTA GATGGATGAT
CAAGTAG
|
|---|
| Protein sequence | MLRLPRITRR ALSSGALAPH FDRPLPPPPP APPAPLCALP PLTAPDALAP LTRRTVRHAD
ALVARIAAAP AHPDPAELRR VVKNLDRLSD VLCGVIDMCE LVRNVHPDPR WVAAAEKTYE
TLCSFMNQLN TSTGLYDALV ATVSHTFPGN PLSPAELRVA QTFLSDFERS GIQLPPGVRA
KFVRHSDNIL SLGRTFLSFA AAGPSADTPI EIPEPEVLLA GLSSKFVASL PRKKRKGPAL
LAPGSWEAQM IGRYADNEEA RRLVYIGSMR EDKDRVYVLE TMLKERAELA HVLGKETWAD
VALSDKMAKT PQNVLQFLTS LATHHRPSAA ADVAALQRLK ALSTVSRTSS QLPTVHAWDR
DHYAEQYAAS LLPNGSLPSI TPYFSVGTAM SGLSHMLSRL YGISFKPVSV AHGEVWHPSV
RRLDVMDEHG KRIGVIYCDL FSRPGKPSAG AAHYTVRCSR RVDDDPSEGD GLPPGWDQHL
GKGMEVQGEA LHGKEGKYQL PIVVLTTDFG TVEESGPALL GWNDLETLFH EMGHAIHSMI
GQTEFHNVSG TRCATDFVEL PSILMEHFIS SPAVLSTFAT HYTTNEPLPI PLIQAHLQLD
QSLKALETHS QILMALLDQK YHSIKHGEQL DSTRVWNELQ SQVGVIPPVR GTAWQTQFGH
LYGYGATYYS YLFDRAIAGK IWSSLFARGR TGPAAANHDP AAAEDILSRE GGEAFKEKVL
KWGGGRDPWE MVGDVIGGAE GEQVAKGDEK AMELVGRWMI K
|
|---|
| |