Gene CNC03610 details

Gene Information

• Locus tag: CNC03610
• ID: 3256446
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006685
• Strand: +
• Start bp: 1143948
• End bp: 1146004
• Gene Length: 2057 bp
• Protein Length: 547 aa
• GC content: 51%
• IMG OID: 638255582
• Product: t-complex protein 1, theta subunit (tcp-1-theta), putative
• Protein accession: XP_569582
• Protein GI: 58264852
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0459] Chaperonin GroEL (HSP60 family)
• TIGRFAM ID: [TIGR02346] T-complex protein 1, theta subunit

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TCTTCCTACC CTTTTATATC TCGTACACTG AAGAACAGGA TGTCTCTAAA AGTACCCAAG 
GCCTCAGGCC CCGACCTTTT TAAGTCTGGC TACAAGGTAC GCCTCTGCTC AATTTACTGT 
GTCAGCCACG CCTGCTTGGA TAAATTGCTG ACTATGCTTC TCTACCATCT ACACAGCACT 
TGTCTGGACT GGAGGAGGCC GTCTTGAGGA ACATAGCGGC TGTTGGAGAG CTCAGCGAGA 
TAGTGAGGAC CTCATTCGGA CCCAATGGTC AGTGATCTCG TTTGTTGGGC CCGTTGCTGT 
CGAGGATAGG GCCTCTTGTT GCCATCGTCT CCTCGTCTTC GTCTTAGGAA GCATGCTGAC 
ACTTGTGAAT CTAGGTCGGA ACAAACTTAT TATCAACCAC CTGGGACGAC TTTTTGTCAC 
TTCTGATGCT GCCACCATTA TCCGAGAAAT TGAGGTTGCC CATCCTGCTG CGAAGCTTCT 
GGTCATGGCT AGTACTGCTC AGGAGGCCGA GATGGGGGAC GCGACCAATC TAGTGCTCAT 
CTTTGCCGGA GAGCTGCTCA AACGATCGGA ACATCTTTTG ACTATGGGTT TGCACCCGTC 
AGACGTCATT CAGGGGTACG AGATGGCCTT GGCAAAGGGA CGAGAAGAGC TCGAAAGTGA 
GTAGCGTGCA TCCCATACGC TGTTGAATAC TGACTTGCTC CTGTCTTCCA GCTCTGGTGG 
CCGCACAGAT CACATCTTCT CCCTTACCTT CTGTCGACAA CCTTGCAGCT GCAGTTTCTT 
CTTCCCTTGC CTCCAAGCAA CCTGGATGTG AAGTACTGCT CTCAAAACTT GTCGCCGAGG 
CTGCCTTGGC AGTCATGCCT AAAAACCCTA AGGATTTCAA CGTCGATTCA GTGCGAGTAG 
TCAAGGTTCT GGGCGGCGGT CTTGAGGCGA GCAGAGTCGT TCGGGGCATG GTGTTCGGTA 
GAGAACCTGA AGGTCCGTTG TCTCGAGCGC CAGAATTTGA AACTGTTTGC TTACGTTTAT 
CTCAGGTATT GTGAAGAATG CTACCAGGGC TAAGGTAGCA GTATATACTT GTGGTCTGGA 
TATCTCCCAG ACTGAGACTA AGGGTACTGT TCTGCTCAAA AAGGCGGAAG ATCTGTTGAA 
CTTCTCACGC GGTGAAGAGA AACAACTCGA GGGCGTAAGT TACCCCTCAT TATCTCTATC 
AAAATCAGTG TTTCTTACCG TTTTCATAGT ACTTCAAAGA AATTGCCGAC TCCGGTGTCA 
AGCTCATCAT TGCTGGTTCC GGTATTGGTG ACCTTGCCTT ACATTATCTC AATCGAATGG 
GCATTGCGGT CATCAAGGTT CTTTCCAAAT TCGACCTTCG ACGATTATGT CGGGTTGTTG 
GTGCCACTCC TCTTGCCCGG CTCGGTGCTC CCACCCCCGA GGAAGCTGGT ATGGTTGATG 
TATTTGAGAC CATCGAGATC GGTGGGGACC GTGTCACTGT CCTTCGACAG GAAGAAGGGG 
AGAAGACTCG AACTGCCACT ATCGTTCTTC GTGGTGCCAC TGCCAACTAC CTTGATGACC 
TCGAACGATC TCTTGACGAC GGTATTAATA CCATCCGCAT CCTTTTCCGC GACGGCCGGC 
TTGTGCCTGG GGCCGGTGCC AGCGAAATTG AACTCGCTCG ACGTATTTCC GCCTACGGTG 
GCAAAACTGC CGGCCTCGCT CAACATTCTA TCAAGCGATG GGCCGAAGCT TGTGAAGTTG 
TTCCTCGTAC ATTGGCTGAG AACGCGGGCC TCAACTCGGA AGATGTCGTC AGTTCTCTCT 
ACAAAGCGCA TGCCGACGGA CAGGTCGATG CGGGTGTGGA CATTGAGAGC GAGAAGGAGG 
GTGTCAGATC TACTAAGGAC ATGGGGGTTT TCGACCCATA TGCTGCTAAA GACTGGGCAT 
TGAAGCTGGC GACCGAGGCA GCTATCAGTG TTCTCAGAGT GGACAGTATC ATTGTGGCCA 
AGCAAGCAGG AATAGCTCCC CCTAAGCAGC AGGGACACTG GGATGATGAT TAGATGGATA 
TGTACAATGC TACAATG 

 

Protein sequence

MSLKVPKASG PDLFKSGYKH LSGLEEAVLR NIAAVGELSE IVRTSFGPNG RNKLIINHLG 
RLFVTSDAAT IIREIEVAHP AAKLLVMAST AQEAEMGDAT NLVLIFAGEL LKRSEHLLTM 
GLHPSDVIQG YEMALAKGRE ELETLVAAQI TSSPLPSVDN LAAAVSSSLA SKQPGCEVLL 
SKLVAEAALA VMPKNPKDFN VDSVRVVKVL GGGLEASRVV RGMVFGREPE GIVKNATRAK 
VAVYTCGLDI SQTETKGTVL LKKAEDLLNF SRGEEKQLEG YFKEIADSGV KLIIAGSGIG 
DLALHYLNRM GIAVIKVLSK FDLRRLCRVV GATPLARLGA PTPEEAGMVD VFETIEIGGD 
RVTVLRQEEG EKTRTATIVL RGATANYLDD LERSLDDGIN TIRILFRDGR LVPGAGASEI 
ELARRISAYG GKTAGLAQHS IKRWAEACEV VPRTLAENAG LNSEDVVSSL YKAHADGQVD 
AGVDIESEKE GVRSTKDMGV FDPYAAKDWA LKLATEAAIS VLRVDSIIVA KQAGIAPPKQ 
QGHWDDD