| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNC03510 |
|---|
| Symbol | |
|---|
| ID | 3256344 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006685 |
|---|
| Strand | + |
|---|
| Start bp | 1109761 |
|---|
| End bp | 1113090 |
|---|
| Gene Length | 3330 bp |
|---|
| Protein Length | 687 aa |
|---|
| Translation table | |
|---|
| GC content | 46% |
|---|
| IMG OID | 638255572 |
|---|
| Product | expressed protein |
|---|
| Protein accession | XP_569682 |
|---|
| Protein GI | 58265052 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CAACAGTCTC CTGATGGCTC CTTTCGAGAG TTAGTAACTG CTCTCATCGA TCATCAACAC
AATCCGCCCA GTGACAATAA AAAAAACAAT TAATTCCGCT TCAGACGTTG ACAACAACTG
CAGAGTCACA TCAATCAAGC ACCTCGGTAC CTGTGATCCT CATAGGATTA TGCCCGAGCA
TGCTCCTTTG TCAATGTCTG GTCAATCTGA CTCAATTGCC TCTTCTCAAC AAGAGCGATC
TCGGGCTTTT GAGCCAAGTG ATTTAGCTAC TGCAAACGAC GAGGCTCCAT TACGCCTCAA
CCCGGGATTC ACGCAACGTA CCACTGTCTT GGAAATACTG AATGCAAGAC AGCCACCTAG
CTGTGATGCT TGCAGGACGC GGAAGCTAGG GTGTTCAGGA AGGCCTTCAT CTATAGAAAT
TACGACAGAA GGCTTAGCGG CCTCTCCCTG TAACGTAAGT CATCCCGCGT CATTCTGAGA
TGTTTTCTGC TTGATTAATG GTATGACGCT TCCATATATA AATAGCACTG TCGCGAATGG
AATCTGGAAT GTTCGTACAC ATACAAGCGC AAACGCAGGG GACGTAAGAA CAAGGCAGTT
GAACAGTTAG CCGTCCAGCA GAAAGCAAGG AAGCTATCCC AAGCTACGAG GCCCTCTGCG
ACAACACAAT TGGACGATCA AGCAGGGGAT GCCAGAGATC ATGCAGAATC CTCGAGCGTT
GGCTATCCAA TAGATCATAA TTTATCTACA CAATACAATT CAGTTTCTGT CGTAGGGCCC
AGTAGTAATA TCGGCACCTG CCATGTGAGT GATAAGGGGC GTGTCAAGCA ATTGCGCAGG
GGACTTACTT GCAGCCATTC CCGCATAGCA ACGACCACCC AATCTGCCAT CTCATGTTCA
GGCGAGAGCT GATCGTCCCA TCCCTTGGTA TTCACATCCT AGCGTTCCCA GCCAATCTGC
AATACTTGGG GATATAGGTC TCAATAGAAG TACACTTACT TCTGACGACC GAGGTACAAA
CTCTCACATT CAGCAGCCAG CCGTCCACTT GTCTATTGAT CACCATGAGA ACATTGCAGA
GGCCCATATT ACTCCTCCAG ATGTTGGTGC TTCTCCATAC CATGGTGTAT CACCTTCGAC
TACCCTCTCT AACGTTTCGC TACCGATATC CACAAATATC GAGTCAGTTT TGCCTCGACA
CTTGGCTTTG CATATCATCA GTTTGTACTT TGAACATGTG GGCAATTTTA TCCCGTTCTG
TCAAACCCAT TAGCTAATCC GAGCTGCAGG TATACTGCAT CATCCCCGTC ATCCATTACC
CATCCTTCGA AAAGGATCTT TCCGCTTATG AAGAGCTGAG AAGGCCCACA TTTTTCGCGT
TGATCATGTC AATCATTGCA GCTACCCTTA TTCACGTGAG TAGTTGTTTA TCTATAAATA
TGAAGGCTCG CTACATGGAC TGATGTCATT GACTGCCGGC AGCTGCCAAA ATCATACTTC
CCAATTCCAG CGCACAAGGT GCGGTCCTTA TCAGATCGGT GCCTCAAGGC TTGCTGCGCT
GTGACGAAGA GCGAAATGGA CAACTGCGAC GTCGACCTAA TCTGCATAAA GTACTTTCTA
TTTGTCGTGC ATAATGTGAG TCAGTGTTGC ACAAGGCGGC TCTGGCTAAC AATCATCCAA
ACTTCCATAG AAACATGGCA ATATCGGTCT TGAAGCTTCG ACATTTGGAG AGGCACAATA
CCTTGCTGTC ACTATGGGAC TGCATCGTGA AGATGTATGT ACCATTTTAT TTCTTCCAAG
TCGATATCGG CTCTAATCCG TTTTCAGACG TACTGTGATT TGGATCCCAT TAATGCGGAG
CGCGGACGAC GAGTGTGGTT TTTGATATAC AACGCAGATA AGTTTGAAGC CGTGTCAAGG
CAAAAACCCG TGCTGTTGCG TGTGGATGAG TTTATGGGGC CAGAATCGAC GGAATTTCCA
GCCGAGGTGT AAGTTAGTAG TTGTATGGCC TTGCAGTTGG TGATGATGGG ACTGATGGGC
CATGGTTGAT TTAGAGATGA CGAGTCCATT ACTTCGGAAG GTATCCTTCC TAGTCGTACA
CCTGCGCCTC TGATAGCAGG GTTCAATACG CTTACACGTA TAGTCACGTT TGTCACTTTT
TCGACCAGGG CTGTTTTGCT CTTCTGATTT GCGACTTGTA GTGTGCTTGG GGACATATTA
ATATCAGAGA GAGACCTCCG CCGCCAACAG ATCACAGATC CGGAGAACCT TCTTTCGGCA
TTGAGAGAGA TGCGCAAACT AGGGCAAAGG ATTCGTTACA TCTCGGACAC CCTCCCCAGG
CCCTTTCAAC TTGAAGCGGA CCAGGGAAAC TCACTGTACG TCAACCATCC ATTGTCACTA
GATTGCTTAT GAGCTCGTGC CTGCGATAGA CCCGAACCTG GATGGGAAGA CGCAGTCAGA
GGCGAGCTTG ATATGTTTTT TTCGGACCCA TTGCCTCCAG AGACAGCGAA GGATGGCTAT
CTGGTGCTCA AAGGAAACAT ACACGTGACT CTAGCGATGA CAAGGCTGCG TTTGATGTCA
GTTTTCAAAA TGTGCCTGCC GGGAGCGTAA CAGCTGACGA CTTAATTGTA GCCTTCTTAG
AGAAAACCTG CTAAACTGCA GTGGGCAACC GGGCACATCC AGTAGGAATG GTACATTATA
CATTCTGTTG CGAGGCAACG TTGACATCCG GCTGACAATT ACTTAGCGGC GGAGCTGGTA
GCCGCTGATA TAGGCGAAAA CACAGTGAAT TGGAGGCAAT CCGTGTATCA AGATCTATAT
AATGTTGTTC ATTGGTGAGT TTATTTTTTT AAGCTAAATA TCTGAACGTT TTTGGCTGAA
CCGGTGTACG TTTAGTCTTC CTATCCGGGC AGTAAGTACC TAACTCACAC CTTTTGCTCA
AAAAAGAAAA TAACTCAGCA CTTGTTGTAG CTGGCGGCAA ATGGACCATC CCTTGTTACA
AAGATCCGAG TTGTGGCGGT CACCCTGTTG GATACCTTAC AGGCGCAGGA TGAAGCGATA
GATCCAAACA TACAGGGAAT GACGACATAT TTATTAAGTA GGTATTTCAA AAACATGGCG
CAGATATCTT AATATTCAAG CCATTGGTGG CAGTGACTTT TACTGATGAT CCTTGTCTGT
CTGAATTGCA GGTTTTTTAG ACATTATGTC TTCCATTGAA AGCCAGTTTG CAGATTGAAG
GCATTTTATC CATTAAATAT TGCTTGATTA TAGTGTTATT TATTTCCTAT TTGTACGGGA
GCGTAATTGT TGTAGCTATT TGTTTGCCGT
|
|---|
| Protein sequence | MPEHAPLSMS GQSDSIASSQ QERSRAFEPS DLATANDEAP LRLNPGFTQR TTVLEILNAR
QPPSCDACRT RKLGCSGRPS SIEITTEGLA ASPCNHCREW NLECSYTYKR KRRGRKNKAV
EQLAVQQKAR KLSQATRPSA TTQLDDQAGD ARDHAESSSV GYPIDHNLST QYNSVSVVGP
SSNIGTCHQR PPNLPSHVQA RADRPIPWYS HPSVPSQSAI LGDIGLNRST LTSDDRGTNS
HIQQPAVHLS IDHHENIAEA HITPPDVGAS PYHGVSPSTT LSNVSLPIST NIELATWTDV
IDCRQLPKSY FPIPAHKVRS LSDRCLKACC AVTKSEMDNC DVDLICIKYF LFVVHNKHGN
IGLEASTFGE AQYLAVTMGL HREDTYCDLD PINAERGRRV WFLIYNADKF EAVSRQKPVL
LRVDEFMGPE STEFPAEVDD ESITSEGILP SRTPAPLIAG FNTLTRIVTV LGDILISERD
LRRQQITDPE NLLSALREMR KLGQRIRYIS DTLPRPFQLE ADQGNSLPEP GWEDAVRGEL
DMFFSDPLPP ETAKDGYLVL KGNIHVTLAM TRLRLILLRE NLLNCSGQPG TSSRNAAELV
AADIGENTVN WRQSVYQDLY NVVHCLPIRA LAANGPSLVT KIRVVAVTLL DTLQAQDEAI
DPNIQGMTTY LLSFLDIMSS IESQFAD
|
|---|
| |