Gene CNC03260 details

Gene Information

• Locus tag: CNC03260
• ID: 3256397
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006685
• Strand: +
• Start bp: 1026871
• End bp: 1029068
• Gene Length: 2198 bp
• Protein Length: 447 aa
• GC content: 52%
• IMG OID: 638255549
• Product: beta1-tubulin, putative
• Protein accession: XP_569650
• Protein GI: 58264988
• COG category: [Z] Cytoskeleton
• COG ID: [COG5023] Tubulin

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.00427493
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CTCTTTTCTC GCGACCACGC GTCCCAACAG TCGACAACCC ACCTTCTTTC CTTCCTTCCC 
TACTTCTCTA GCCCCCATCA AAGAGTGAGT AGTGCCTATC TACCACCACG TGTGCCATGC 
CACGAGGGTC TGTGCTGATC GCAGTTGTAT CCCTCCGCCC TCTAAAACGC GCTATGTCCA 
CCCTGCACCT GCAATGACCC TTTCTCGTGC CCTTATTCGC CTTTCTTTAT CTTCTAATCT 
GTATCTCTTC CCTACGCCAT TGCATGATGG GCCGTTCAGT GCGAGAGATC GTTCACCTTC 
AAACCGGTCA GTGTGGTAAC CAGATCGGTG CCAAATTCTG GTGCGTCGCC TTTTATTCCT 
TACCTCGGGC CCCTATTCAC TCGCCCACAG GGAGGTCGTC TCCGAAGAGC ACGGCATCCA 
GGCCGATGGC TCTTACAAGG GTACCACCGA CACCCAGCTC GAGCGCATCA ACGTCTACTA 
CAACGAGGCC GCGGCGGGCA AGTATGTTCC TCGAGCCGTC CTCATTGATC TCGAGCCCGG 
AACTATGGAC TCCATCCGGG GTGGCCCTCT TGGTAGCCTT TTCAGGCCCG ATAACTTGTG 
AGTTACGTTG CGAGACTTTA TGTGAACAGT AGCTCATCAC TGTATAGTGT TTTCGGCCAG 
TCGGGTGCCG GTAACAACTG GGCTAAGGGC CACTACACTG AAGGTGCCGA GCTTGTTGAC 
TCTGTCCTCG ATGTTGTCCG ACGAGAGGCC GAGGGCTGTG ACTGCCTTCA AGGTTTCCAG 
ATCACCCACT CTCTCGGTGG TGGTACCGGT GCCGGTATGG GTACACTTTT GATCTCTAAG 
ATCCGAGAAG AATTCCCCGA CCGAATGATG TGCACTTTCT CCGTCGTTCC CTCTCCCAAG 
GTGCGTGCGT CAGGCAAAAT ACTCGAATAT ATGTTTAACT TTGTTCTAGG TCTCGGACAC 
CGTCGTTGAG CCTTACAACG CCACTCTTTC CGTCCATCAG CTCGTCGAGA ACTCTGACGA 
GACGTTCTGT ATTGACAATG AGGCCCTCTA TGACATCTGC TTGCGTACTC TCAAGCTTTC 
CACCCCTACA TATGGTGACT TGAACCACCT CGTCTCCGTT GTTATGTCTG GTGTCACTAC 
ATGTCTTCGT TTCCCCGGTC AGCTTAACTC CGACCTTCGA AAATTGGCCG TTAACATGGT 
GCCTTTCCCT CGTCTTCATT TCTTCATGGT CGGCTTTGCG CCTCTCACCG CCCGAGGCTC 
CGCTAGCTAC CGTGCCGTCA CCGTTCCTGA GCTTACTCAG CAAATGTTTG ACGCCAAGAA 
CATGATGGCT GCCTCTGACC CTCGCCATGG CGTAAGCTCT CACATCTGTA TCAAACAGTG 
AAATATTAAT TTTGTCATAT TAGCGATATC TCACTGTCGC CTGCTACTAT CGAGGCAAGG 
TTTCCATGAA GGAGGTTGAA GACCAGATTC AGTCTGTCCA GGCCAAGAAC TCCGCTTACT 
TTGTTGAGTG GATTCCCGGA AACATCTCTG CCGCGCAGTG GTGAGTCCAA ATAATTATCA 
GCTACGAACC TTGCTTACGA GACAACTATC GTTTAGTGAC ATCCCTCCTC GCGGTCTCAA 
GATGTCCTCT ACCTTCATTT GCAACTCGAC TTCCATCCAG TCGCTTTTCA AGCGTATCGG 
CGAGCAGTTC TCTGCCATGT ACAGGCGAAA GGCTTTCGTG CACTGGTACA CTGGAGAGGG 
TATGGACGAG CTTGAATTCG TAAGCATCTT GTCATGTACG CCCGTAACAG ATAACTAACA 
GTAGTGCTTA GTCTGAAGCC GAATCCAACT TGCAAGACTT GGTATCCGAG TACATGCAGT 
ACCAGGAGGC GGGAGCGGAC GACGAAATCT ATGGTGATGA GGAGATCCCC ATTGAGGAGG 
AGGAGATGTA AGGTCTCCTC GTCCCTATGT TGCCCCTTCT ACCCCACATT TACCCTTTGC 
ATCCGTGCTT CGCACCCCAC CACCACAGCG ACTATAAGGT CGTTGGGTTT TGCTAAAGGT 
TTATCTTATT CCCCGCATCT ATATATCCCC CCCTTTCCTT TTTGCCTCAC CCGGAGGTTG 
AGTTCTCCGA TGTCTCGCTG ATGAGACGGT GTGCTGCATA CTTCGACATT CTTTTCAGTG 
ATTGGTCTCT ACAGTTCTAT GCAACTTGTG AGGCCTGG 

 

Protein sequence

MREIVHLQTG QCGNQIGAKF WEVVSEEHGI QADGSYKGTT DTQLERINVY YNEAAAGKYV 
PRAVLIDLEP GTMDSIRGGP LGSLFRPDNF VFGQSGAGNN WAKGHYTEGA ELVDSVLDVV 
RREAEGCDCL QGFQITHSLG GGTGAGMGTL LISKIREEFP DRMMCTFSVV PSPKVSDTVV 
EPYNATLSVH QLVENSDETF CIDNEALYDI CLRTLKLSTP TYGDLNHLVS VVMSGVTTCL 
RFPGQLNSDL RKLAVNMVPF PRLHFFMVGF APLTARGSAS YRAVTVPELT QQMFDAKNMM 
AASDPRHGRY LTVACYYRGK VSMKEVEDQI QSVQAKNSAY FVEWIPGNIS AAQCDIPPRG 
LKMSSTFICN STSIQSLFKR IGEQFSAMYR RKAFVHWYTG EGMDELEFSE AESNLQDLVS 
EYMQYQEAGA DDEIYGDEEI PIEEEEM