Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNC03250 |
Symbol | |
ID | 3256124 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006685 |
Strand | - |
Start bp | 1025553 |
End bp | 1026298 |
Gene Length | 746 bp |
Protein Length | 178 aa |
Translation table | |
GC content | 49% |
IMG OID | 638255548 |
Product | transcriptional elongation regulator, putative |
Protein accession | XP_569648 |
Protein GI | 58264984 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0760] Parvulin-like peptidyl-prolyl isomerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.00520098 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCATCAA CCGGTTGGGA GATTCGTTTC TCCAATTCTC GTCAAATCCC CTACTTCTAC AACTCGGAAC GTAGCATCTC CACTTGGGAA CCCCCTTCTG AACTCAGCGC AGAGCAAATT CAGCAATTGC CTGGCGCGGC CAAGTATATG AATGTACAGT TGGCTCAACC TGCAGGTGGC AAGGAAGGTC AGGTGAGGGC CAGTCATATC CTGGCAAAGC ATGCTGGAAG CAGGAGGCCC GCTTCATGGA GAAATGTCCG TGTGACTTAA GAACACTTCG CAATGCAAAC TGATTTCGGA CGCAGGATAA GATCACAATC ACTTCCGACG AGGCTCAAGC TATTATCGAA CAGCACATCG CATATCTTCA ATCCCTCCCT CCGGCTGATC TTCCCAAGGA ATTTGCAAAG ATTGCCTCAA CAGAGAGCGA TTGTTCAAGC GCGAGGAAGG GTGGTGATCT TGGATGGTTT GGGAGGGGAC AAATGCAAAA GCCCTTTGAG GTAAGCGGCC AGCATTGACA GAGTGGCTAT ATCTAATAAG CGGTCTCACT AACCTTGACG CAGGACGCGA CGTTTAACAC TCCTGTCGGG CAGCTGAGCG GGATTGTCAA GACGGACTCT GGTATCCATG TCATCCTGCG TACTGGATAG GATAGTTGCT TTGACGAATT TAGATTGGGT GATCTATGCC AACGAACGGC TATGGAAATC AAAGTTGGGA TACCGTATGC ATTATCATAT ACAAGT
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Protein sequence | MSSTGWEIRF SNSRQIPYFY NSERSISTWE PPSELSAEQI QQLPGAAKYM NVQLAQPAGG KEGQVRASHI LAKHAGSRRP ASWRNDKITI TSDEAQAIIE QHIAYLQSLP PADLPKEFAK IASTESDCSS ARKGGDLGWF GRGQMQKPFE DATFNTPVGQ LSGIVKTDSG IHVILRTG
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