Gene CNC02990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNC02990 
Symbol 
ID3256285 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006685 
Strand
Start bp959436 
End bp960071 
Gene Length636 bp 
Protein Length132 aa 
Translation table 
GC content46% 
IMG OID638255521 
ProductDNA-directed RNA polymerase i 13.7 kda polypeptide, putative 
Protein accessionXP_569944 
Protein GI58265576 
COG category[K] Transcription 
COG ID[COG1594] DNA-directed RNA polymerase, subunit M/Transcription elongation factor TFIIS 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTCCTA CAAGAGTATC CGCCCACAGG ATAGGTTCAT TACTCTTCTG CCCCGCATGC 
GGCACGCTTT TAGATCTGCC CAAGGATGAT CAGAATGAGA TTGCATGTAG TCAGTGCGGA
AGGCTGGAGC CTGCTTCTTG TAAGTAAGAG TCACATGTAT TCCAAATTGA CTTGATGGAT
GTAACGTTGT AACCTTGTTA ATTGTCTTTT TGTATATTTA TTAGCCTATG AAAACTTGCC
GACCAAGACG TATTCTTCGC CCAATGCTTT CCCAAGCAGT CTGAGATCAA AGAGGGCGTT
GGTGCAGAAT AAACTTGATG CTGGAGAGGC TGCCAAGGGA AGAGATCCTG TTGTGAGTCG
ATCTAGTTAT TTTTGGTGTG GTGTGGTGCG GGTCTTTGCT GATTCAGAGC GGTTGGTGTG
TTCATTGCGC GCGTAGGCTC AAGAAAAATG TCAAAAGTGT GGTCATATCG GGCTTAGTTA
CAAGGAGATG CAGCTTCGGT CTGCAGATGA AGGAAGTACA ATCTTTTACA AGGTGCGTGT
GCTAGGGGGG GAAAGAAGAA AGGGGTCAAA TGTTGACTTG GTCTGGCTTT TTCATAGTGT
CTCAACTGTG GAGATCAAAC GTCCACCAAT AACTAG
 
Protein sequence
MAPTRVSAHR IGSLLFCPAC GTLLDLPKDD QNEIACSQCG RLEPASSYEN LPTKTYSSPN 
AFPSSLRSKR ALVQNKLDAG EAAKGRDPAQ EKCQKCGHIG LSYKEMQLRS ADEGSTIFYK
CLNCGDQTST NN