| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNC02960 |
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| Symbol | |
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| ID | 3256515 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006685 |
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| Strand | + |
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| Start bp | 951313 |
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| End bp | 955573 |
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| Gene Length | 4261 bp |
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| Protein Length | 1090 aa |
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| Translation table | |
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| GC content | 49% |
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| IMG OID | 638255518 |
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| Product | ATP dependent helicase, putative |
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| Protein accession | XP_569594 |
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| Protein GI | 58264876 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1112] Superfamily I DNA and RNA helicases and helicase subunits |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.275864 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTCATTTAAT CGCTATTTAT TACCAAGCAT ACTTGGAACC ATCTAGCGAA CAACTCACTA
ACTGTCATGG AGTTTTCCAA CTTTGAAGGA GCATCACAGG TACGTCTCGT CCTTCCTACC
CTTCCTTCTT GCCTCCCTTT CATCGACGCA CAGTAATCAC TGACGACAGT TGACAGTATG
GTCCGGACAT CGATGACAAC ACTTCATTAT ACTCGTCAAT TCCGCCTTCA GTAGTTACAG
CGCCCACTAT CAGTGGCGAT ATTGCCAGTC AGCTAGGCGA CCTTAATCTC GGCGAAACTA
CGTCAGGGCA TGCAGCAGCC GGTCAAGTCT ATATAGACGA TTTTGACGAG GAAATAGAGC
GGAATTCATT TGGAGAAGGG GTCGAGCATG CTTGCAGGTA AGTATAGTCA CTGATAAAAA
GCTAGTTCAT AGCGTTGATG TGGGACTTTA GCTACTGTGG TATTCATAAT CCCCAATGTG
TTGTCAAGGT AAGTGTCTTC CTTTCATGGA AATTCAGTAT CAGTAATTCA CTCGAGCTGT
ATAGTGTCTT CACTGTAATA AATGGTTCTG TAATTCTCGT GGAAATACAT CTGCTTCGCA
TATCGTAAAT CACCTAGTCA AGGCGAAGCA CAAAGAAGTG ATCCTACACA AGGAAAGCGC
TCTTGGAGAT ACCATCCCAG AATGTAAGAT GACACTTGTA CTTTTGACAT AAAGCTAAAT
AAGTTCATAC TAGGCTACAA CTGTGGCAGT AAAAATGTGT TTATGCTAGG GTTCATTCCC
GCGAAAAGCG ACACTGTTGT CGTTTTACTC TGCCGGTAAG CTTTATTTGA TCTTTCTCCC
CATTTGCCGC TCACACTCTT ACAGGCAACC TTGTGCAGCC TTGACGAGTT CCCGGGATAT
CAATTGGGAT ACCTCACAGT GGTCAGCTAT CATCGATGAT CGTCAGTTTC TCTCTTGGCT
CGTCAAGGTA CCGTCAGAGG CCGAGCAACT TCGAGCGAGA CAAATTTCTT TGGCCCAAAT
ATCAAAACTT GAAGAACTTT GGAGAGAAAA TCCCAATGCA AAGCTTGAAG ATGCGGAGGC
ACAGTCTGGC GAGGAGGAGA TGCAGCCGAT CTTGCTCAAG TGAGTATGTC TGTCCCCAAA
GTTATTTTTT GCTAAAGGAT GCGTCAGATA TGAGGATGCG TACCAATATC AGAACATTCT
CGGTCCTCTG GTTAAAGTCG AAGCTGATTA TGACAAGCGT ATGAAAGAAT CCCAAACCGA
GAATGATATC ACGATACGAT GGGATATGGG TCTTAATCAA AAGCGTCTTG CATGGTTTTG
CATGCCGAAA CTCGAAAGCG GAGAAGTTAG ATTGGCAGTA GGCGATGAGT TGAAGCTCAA
ATTTGCCGGG ACGACCAGCA GCGTCGGAAT TAAAGGTCTC CAGGCGTTCA ACAAAGCGGG
TTGGGGAAGT TCCGGAGATG CAGTATGGGA GGGAGTTGGG AGTGTCGTCA AGATACCGAA
CAGTAAGTGT GCAATCGTAT GGCTTGGCTC AAAACCTAAT ATGATCATTT TAGATGCATC
GGACGAAATT TGCTTGGAGC TTCGGAGAAA TGACGGAGTG CCTTTCGATT GCACTCACGG
CTTTTCTGTC GACTTTATTT GGAAATCGAC CAGTTTCGAC AGGATGCAGG CGGCCATGAA
AACGTTTGCG ATCGACGAGA AGAGTGTGAG CGGCTATATC GTGAGAATTT TCTTCTTGTC
CATCAGAAAA GAAGGTATCT GATAAGGTTT TTTCAGTACC ATAAATTGCT CGGACACGAA
GTCGAACCCC AAGTGCTTCG CACTCAGATG CCCAAACGTT TTGCTGCCCC TAATCTTCCA
GAACTTAACC ACTCGCAAAT GTCTGCCGTC AAGGCCGTAT TGCAAAAACC GCTGAGTCTC
ATCCAAGGCC CTCCAGGAAC TGGGAAAACG GTGACTTCTG CTTCTATCGT ATATCACCTC
GCCAAGATGA ATCCTGGTCA GGTTCTGGTA TGCGCGCCTT CCAACGTAGC TGTTGACCAT
CTTTGCGAAA AGATTCACCA GACGGGTCTC AAGGTCGTGC GATTAGCAGC CAAATCACGA
GAAGCGCTTG ATTCATCGGT TGACTTCCTC TCCCTTCACA GTCAAGTAGC CAACGCAGAC
ACGCACCACG AGTTGCAGAA ACTCATTCAA CTGAGAAATG ACCAAGGAGA ATTAAGTCAG
AGCGACGAAA GAAAGTACAA GGCGTTGGTC AAAGCGTGTG AGAAGGACAT TTTGAACGCG
GCGGATGTTA TCTGTACTAC GTGTGTCGGT GCGGGTGATC CCAGGCTGGC CAAGTTCAAA
TTTAGAACAG TTTTGATCGA TGAAGCTACT CAGTCTGCCG AGCCTGGTGA GTCGTTTCTT
AACATTGTTT TCTTGTTTTT TCAGAGAACT GATGACTCGT AGAATGTATG ATCCCTCTTG
TTATGGGGTG TAAACAAGCT GTACTGGTGG GCGATCACCA ACAATTGGGA CCAGTCATTA
TGAACAAGAA AGCAGCACGC GCTGGTCTTT CGCAATCCTT GTTCGAACGG CTCGTCATCC
TGGGCAACCA CCCTATCCGA CTGCAGGTGC AGTACCGGAT GCACCCCTGC CTTTCCGAGT
TTTCATCCAA CCTGTTCTAC GAGGGCACTT TGCAGAATGG TGTCACGGCG CCAGAAAGGC
TGCGTAAGCA TGTAGATTTC CCCTGGCCAG TCGCGGACAC GCCAATGTTC TTCCATCAGA
ACCTTGGTAC GGAGGAAATA TCATCAAGCG GAACATCTTT CCTCAACAGA ACCGAAGCTT
CCAATGTTGA AAAGATGGTG ACCAAATTTT TCAAGTCTGG TGTCTTACCC AATCAGATTG
GTGTTATTAC GCCATACGAA GGACAGCGAT CGTACATTGC GTCGTACATG CAGCTACATG
GCTCGCTGAA AAAGGATCTA TACAAAGAAG TCGAGGTGGC GAGTGTTGAT GCGTTCCAGG
GTCGTGAGAA GGATTATATC ATCTTGAGTT GTGTGAGAAG CAACGAGCAC CAGGGTATCG
GATTTTTAAA TGATCCTAGA AGACTGAACG TGGCTCTTAC CCGTGCCAAG TACGGCGTGG
TGATCTTGGG TAATCCAAAG GTGCTGAGCA AGGTAAAGTT TTAATCTCAA GTCTGCGTAT
TATACCAGCA CTGACTTTTT TTTATTTATT TTACCGTTAG CACCCTCTTT GGCTTTACCT
CCTTTCCCAC TACAAGGAGA AGGGGTGCTT TGTTGAAGGC CCTCTCAGTA ACCTTCAGCC
GAGTATGGTC CAGTTCAGCC GGCCGAAAAA GTCTTTGGCA GCGGCTATGG ACCCTTTCAA
GAGACGTGAG ACTTCTGCGG TTGAATTTCT CAGCAAGAGT GAGTTTTGGT CGTTTTTATC
TGTTCGGTTT GGTTTGGATG CGGCGCATAC TAATATAACC ATGTAACCTT GCAGATATGG
GTCATGGACA AGCGCAATCC GCTGCCGCAA ATCGTTTCGA TCCAGCCTAT TACCGTACCC
ATAACCCTCT TTCGTTTATC CCGTCTGATG CGCAATCGGT AGTCAGCCAA GCAATGACCA
GCTCTGCTTT CCCCTTATTC GGTGGTGTTG GCGGTGGTGT TGGTGGTGGT GGCGGTGGTG
GGAAGAACAA GACGTATACG GGATACGCTT CAAGTGTCGT TTCCCAACAA CCGATAGACG
GCGGTAACGC TAGCGCATTT GCACCTCCTC GCGCCGGACA ATCACAATTT GACAGGTTTG
CCAGTATCGT CGGGTCGGCG GGGTCGGCCG GGTCGGCGGG TGCGGGGGGC GCGGGTGTAG
GCGCTGGCGG GGGCGGGGGC GGGGGCGGGG GCAACGTGAT GATGGGGAAG GGGAGGCGGC
TTTCGATTGG GAGCGAGGCG GCAAGCGCGT CGATGTATGC GTACGGCTAC AAGGCGGGTG
AGGACGATAC GCAGAGTATC GCACCGAGCC AGGCTGGTAT GACCGAGTTT TAGCAAAATA
AAATAAAATG AAATAAAAAA ACGAGAAAAG AGAGCAAAGG TGGGGTATCT CAGCGGTATA
TCGACCTTTT GTCGAGCCTC TCCGATTGGC ACACATGTCC ATATGGACCG TATGGAGCGG
TTGTGCTACG TTTTGGGGTC CGTCCAGTAG CGATTTGCTC TGTGCCCACC TCTTGTCGGC
GGGCGGGGGG GGCGGGGGTG AGGGGGGTGG ACGTAGACGT GGGGCGGGTA AGAGTGGTGA
T
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| Protein sequence | MEFSNFEGAS QYGPDIDDNT SLYSSIPPSV VTAPTISGDI ASQLGDLNLG ETTSGHAAAG
QVYIDDFDEE IERNSFGEGV EHACSYCGIH NPQCVVKCLH CNKWFCNSRG NTSASHIVNH
LVKAKHKEVI LHKESALGDT IPECYNCGSK NVFMLGFIPA KSDTVVVLLC RQPCAALTSS
RDINWDTSQW SAIIDDRQFL SWLVKVPSEA EQLRARQISL AQISKLEELW RENPNAKLED
AEAQSGEEEM QPILLKYEDA YQYQNILGPL VKVEADYDKR MKESQTENDI TIRWDMGLNQ
KRLAWFCMPK LESGEVRLAV GDELKLKFAG TTSSVGIKGL QAFNKAGWGS SGDAVWEGVG
SVVKIPNNAS DEICLELRRN DGVPFDCTHG FSVDFIWKST SFDRMQAAMK TFAIDEKSVS
GYIYHKLLGH EVEPQVLRTQ MPKRFAAPNL PELNHSQMSA VKAVLQKPLS LIQGPPGTGK
TVTSASIVYH LAKMNPGQVL VCAPSNVAVD HLCEKIHQTG LKVVRLAAKS REALDSSVDF
LSLHSQVANA DTHHELQKLI QLRNDQGELS QSDERKYKAL VKACEKDILN AADVICTTCV
GAGDPRLAKF KFRTVLIDEA TQSAEPECMI PLVMGCKQAV LVGDHQQLGP VIMNKKAARA
GLSQSLFERL VILGNHPIRL QVQYRMHPCL SEFSSNLFYE GTLQNGVTAP ERLRKHVDFP
WPVADTPMFF HQNLGTEEIS SSGTSFLNRT EASNVEKMVT KFFKSGVLPN QIGVITPYEG
QRSYIASYMQ LHGSLKKDLY KEVEVASVDA FQGREKDYII LSCVRSNEHQ GIGFLNDPRR
LNVALTRAKY GVVILGNPKV LSKHPLWLYL LSHYKEKGCF VEGPLSNLQP SMVQFSRPKK
SLAAAMDPFK RHMGHGQAQS AAANRFDPAY YRTHNPLSFI PSDAQSVVSQ AMTSSAFPLF
GGVGGGVGGG GGGGKNKTYT GYASSVVSQQ PIDGGNASAF APPRAGQSQF DRFASIVGSA
GSAGSAGAGG AGVGAGGGGG GGGGNVMMGK GRRLSIGSEA ASASMYAYGY KAGEDDTQSI
APSQAGMTEF
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